BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0077.p (294 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZU3.1 D8IZU3_HERSS HflC protein EC=3.4.21.- 532 e-149 A6SZW2.1 A6SZW2_JANMA Inner membrane-anchored protein EC=3.4.-.- 503 e-140 A4G4L0.1 A4G4L0_HERAR Protein HflC EC=3.4.-.- 493 e-137 F1VZ31.1 F1VZ31_9BURK HflC protein 487 e-136 C3X7J4.1 C3X7J4_OXAFO HflC 416 e-114 >D8IZU3.1 D8IZU3_HERSS HflC protein EC=3.4.21.- Length = 297 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 251/292 (85%), Positives = 277/292 (94%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M RL+TS+I AV+AIWL S+TIFVV+QR SAIVFALGEVKQV+TEPGLHFKLPPPFQNV+ Sbjct: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVITEPGLHFKLPPPFQNVM 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 Y+DKRIQTLDTPDADRFITAEK NVLVD++VKWRIVDPRLYF+SFG DERR QDRLSQIV Sbjct: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KAALN+EITKRTVREVIS +R VMDAIQ +VA EAKQIG E+IDVRLRRVDYVDQINNS Sbjct: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 V++RMKSER RVANELRSTGAAESEKIRADADRQRVV+LAEAYR++EKIRGAGD+KASQ+ Sbjct: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDSKASQI 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKGVGSASA 292 YAQAFGQNPEFFKFYRSLEAYRASFKNRHD+MVVDP+SEFFKYFKG+G+ SA Sbjct: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDVMVVDPSSEFFKYFKGIGAGSA 292 >A6SZW2.1 A6SZW2_JANMA Inner membrane-anchored protein EC=3.4.-.- Length = 296 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 238/292 (81%), Positives = 271/292 (92%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M+RLI+ +I AVIA +S+T+FVV+QRQ AIVFALGEVK V++EPGLHFKLPPPFQNV+ Sbjct: 1 MNRLISYVIVAVIAFIALSSTLFVVDQRQYAIVFALGEVKTVISEPGLHFKLPPPFQNVV 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 ++DKRI TLDTPDADRFITAEKKN+LVD+FVKWRIVDPRLYF+SF GDER AQ+R++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIVDPRLYFVSFSGDERSAQNRMAQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KA+LNEEITKRTVREVISGERGKVMD IQ+KV EAKQIG EI+DVRL+RVDYV+QINNS Sbjct: 121 KASLNEEITKRTVREVISGERGKVMDGIQKKVTEEAKQIGVEIVDVRLKRVDYVEQINNS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 V+DRMKSERARVANELRSTGAAESEKIRADADRQR V+LAEAYRDAE+IRG GDAKASQ+ Sbjct: 181 VFDRMKSERARVANELRSTGAAESEKIRADADRQRTVILAEAYRDAEQIRGEGDAKASQI 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKGVGSASA 292 YAQAFGQ+PEF+KFYRSLEAYRASFK R+D++V+DPNSEFFKYFK GS A Sbjct: 241 YAQAFGQSPEFYKFYRSLEAYRASFKTRNDMLVIDPNSEFFKYFKNPGSTGA 292 >A4G4L0.1 A4G4L0_HERAR Protein HflC EC=3.4.-.- Length = 296 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 237/296 (80%), Positives = 268/296 (90%), Gaps = 2/296 (0%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M+RLI+ +IA IA + +T+FVV+QRQ AIVFALGEVK V+ EPGLHFKLPPPFQNV+ Sbjct: 1 MNRLISYVIALAIAAGIFFSTMFVVDQRQYAIVFALGEVKTVINEPGLHFKLPPPFQNVV 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 ++DKRI TLDTPDADRFITAEKKN+LVD+FVKWRIVDPRLYF+SF GDER AQ+R++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIVDPRLYFVSFSGDERSAQNRMAQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KAALN+EITKRTVREVISGER KVMD IQ+KV EAKQIG EI+DVRL+RVDYV+QIN S Sbjct: 121 KAALNDEITKRTVREVISGERSKVMDGIQKKVTEEAKQIGVEIVDVRLKRVDYVEQINAS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 V+DRMKSERARVANELRSTGAAESEKIRADADRQR V+LAEAYRDAE+IRG GDAKASQV Sbjct: 181 VFDRMKSERARVANELRSTGAAESEKIRADADRQRTVILAEAYRDAEQIRGEGDAKASQV 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKG--VGSASAKK 294 YAQAFGQNPEF+KFYRSLEAYR SFK R+D++V+DPNSEFFKYFK GS +AKK Sbjct: 241 YAQAFGQNPEFYKFYRSLEAYRGSFKTRNDMLVIDPNSEFFKYFKNPTTGSGAAKK 296 >F1VZ31.1 F1VZ31_9BURK HflC protein Length = 296 Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust. Identities = 227/292 (77%), Positives = 272/292 (93%) Query: 1 MSRLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVI 60 M+R++++++ A+IA++L++++IFVV QRQ AIVFALGEVKQV++EPGLHFK+P PFQNV+ Sbjct: 1 MNRIVSAVVLALIALYLLTSSIFVVNQRQYAIVFALGEVKQVISEPGLHFKMPQPFQNVL 60 Query: 61 YIDKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIV 120 ++DKRI TLDTPDADRFITAEKKN+LVD+FVKWRI+ P LYF+SFGGDERRA DR++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIIGPTLYFVSFGGDERRALDRMAQIV 120 Query: 121 KAALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNS 180 KAALNEEITKRTVREVISGERG VMDAIQ+KVA EAK+IG EI+DVRL+RVDYV+QIN S Sbjct: 121 KAALNEEITKRTVREVISGERGSVMDAIQKKVADEAKEIGVEIVDVRLKRVDYVEQINLS 180 Query: 181 VYDRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQV 240 VY+RMK+ER RVANELRSTGAAESEKIRADADRQR VLLA+AYRDAE +RG GDAKASQ+ Sbjct: 181 VYERMKAERTRVANELRSTGAAESEKIRADADRQRTVLLADAYRDAEMLRGEGDAKASQI 240 Query: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKGVGSASA 292 YA+AFG++PEF+KFYRSLEAYR+SFK+R DLMVVDP+SEFFKYFK G+ +A Sbjct: 241 YAEAFGKSPEFYKFYRSLEAYRSSFKSRSDLMVVDPSSEFFKYFKAPGATAA 292 >C3X7J4.1 C3X7J4_OXAFO HflC Length = 290 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 189/288 (65%), Positives = 251/288 (87%) Query: 3 RLITSIIAAVIAIWLVSTTIFVVEQRQSAIVFALGEVKQVVTEPGLHFKLPPPFQNVIYI 62 R + +++ ++A V T +FVV+QRQSAI+F +GE+K V+ EPGL+FKLP P QNV+++ Sbjct: 2 RYVFALLVIMLAALTVGTGMFVVDQRQSAIIFGMGEMKDVIEEPGLYFKLPSPLQNVLFL 61 Query: 63 DKRIQTLDTPDADRFITAEKKNVLVDSFVKWRIVDPRLYFISFGGDERRAQDRLSQIVKA 122 DKRIQ+ +T ++DR ITAEK N+LVDSFVKWRIVDPRL++ISFGGDE+RAQDR+ QI+KA Sbjct: 62 DKRIQSTETHESDRIITAEKMNILVDSFVKWRIVDPRLFYISFGGDEQRAQDRMEQIIKA 121 Query: 123 ALNEEITKRTVREVISGERGKVMDAIQRKVATEAKQIGAEIIDVRLRRVDYVDQINNSVY 182 ALN+EITK+TV +VISG+R ++M+AI++++++E + IG +I+DVRL+RV YVDQINNSV+ Sbjct: 122 ALNDEITKKTVAQVISGDRSELMEAIKKRISSETEHIGVQIVDVRLKRVRYVDQINNSVF 181 Query: 183 DRMKSERARVANELRSTGAAESEKIRADADRQRVVLLAEAYRDAEKIRGAGDAKASQVYA 242 +RMKSER RVANELRSTG AESEKIRADA++QR V+LAEA+RDAEKI+G GDAKAS++YA Sbjct: 182 ERMKSERTRVANELRSTGEAESEKIRADAEKQRTVILAEAFRDAEKIKGEGDAKASRIYA 241 Query: 243 QAFGQNPEFFKFYRSLEAYRASFKNRHDLMVVDPNSEFFKYFKGVGSA 290 QAF +NPEF++FYRSL+AYR SFK++ D++VVDP+SEFF+Y K A Sbjct: 242 QAFSKNPEFYRFYRSLQAYRESFKDKKDVLVVDPSSEFFRYMKSPKGA 289