BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0059.p         (64 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IZV8.1 D8IZV8_HERSS NlpD lipoprotein                                125   2e-27
A6SZX8.1 A6SZX8_JANMA Lipoprotein nlpD                                120   1e-25
A4G4J4.1 A4G4J4_HERAR Putative Peptidase M23B                         114   7e-24
C7RSH6.1 C7RSH6_ACCPU Peptidase M23                                   114   7e-24
Q128R9.1 Q128R9_POLSJ Peptidase M23B                                  109   1e-22

>D8IZV8.1 D8IZV8_HERSS NlpD lipoprotein
          Length = 332

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 63/64 (98%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH++NLLSAYAHN+TILVKEGQ+VTKGQKIAEMG SDSD+VKLHFEIRQQGKPVDPSKY
Sbjct: 269 IKHTSNLLSAYAHNQTILVKEGQSVTKGQKIAEMGKSDSDTVKLHFEIRQQGKPVDPSKY 328

Query: 61  LPPR 64
           LPPR
Sbjct: 329 LPPR 332


>A6SZX8.1 A6SZX8_JANMA Lipoprotein nlpD
          Length = 317

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           VKH++NLLSAYAHNK ILVKEGQ V KGQKIAEMG+SDSDSVKLHFEIRQQGKPVDPSK+
Sbjct: 254 VKHTSNLLSAYAHNKAILVKEGQNVNKGQKIAEMGDSDSDSVKLHFEIRQQGKPVDPSKF 313

Query: 61  LPPR 64
           LP R
Sbjct: 314 LPSR 317


>A4G4J4.1 A4G4J4_HERAR Putative Peptidase M23B
          Length = 304

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 60/64 (93%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           VKH++ LLSAYAHNK I VKEGQ+V+KGQKIA+MG+SD+DSVKLHFEIRQQGKPVDPSK+
Sbjct: 241 VKHTSTLLSAYAHNKIIHVKEGQSVSKGQKIADMGDSDADSVKLHFEIRQQGKPVDPSKF 300

Query: 61  LPPR 64
           LP R
Sbjct: 301 LPSR 304


>C7RSH6.1 C7RSH6_ACCPU Peptidase M23
          Length = 329

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 50/64 (78%), Positives = 60/64 (93%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           VKH+NN L+AYAHNKT+LVKEGQ+V KGQKIAEMG++D+D VKLHFE+R+QGKPVDP K+
Sbjct: 266 VKHNNNFLTAYAHNKTVLVKEGQSVGKGQKIAEMGDTDADQVKLHFEVRRQGKPVDPLKH 325

Query: 61  LPPR 64
           LPPR
Sbjct: 326 LPPR 329


>Q128R9.1 Q128R9_POLSJ Peptidase M23B
          Length = 318

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 58/64 (90%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH+N  L+AYAHN+T+LVKE Q V KGQKIAEMGN+D+D VKLHFEIR+QGKPVDP+KY
Sbjct: 255 LKHNNTFLTAYAHNQTLLVKEDQTVKKGQKIAEMGNTDADRVKLHFEIRRQGKPVDPAKY 314

Query: 61  LPPR 64
           LPP+
Sbjct: 315 LPPK 318