BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0053.p (518 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6SZY1.1 A6SZY1_JANMA ATP-dependent DNA helicase 884 0.0 A4G4J1.1 A4G4J1_HERAR Putative ATP-dependent helicase 883 0.0 D8IZW2.1 D8IZW2_HERSS ATP-dependent DNA helicase protein EC=3.6.1.- 879 0.0 F1VXG1.1 F1VXG1_9BURK DinG family ATP-dependent helicase YoaA 867 0.0 D8NIQ3.1 D8NIQ3_RALSO Putative ATP-dependent helicase EC=3.6.1.- 711 0.0 >A6SZY1.1 A6SZY1_JANMA ATP-dependent DNA helicase Length = 669 Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/517 (83%), Positives = 471/517 (91%), Gaps = 1/517 (0%) Query: 1 MKTTSSGDKAELSKVPENALIWNLVTSTRDTCFGAECQYYQDCFVMKARKEAQQADVVVV 60 MKTT SGDKAELSKVPE A IWNLVTSTRDTC GAECQYYQDCFVMKARKEAQQADVVVV Sbjct: 154 MKTTGSGDKAELSKVPETASIWNLVTSTRDTCMGAECQYYQDCFVMKARKEAQQADVVVV 213 Query: 61 NHHLFFADVALKDTGVAELLPTANTVIFDEAHQLPETATMFFGDTVSTSQVLELCRDVLA 120 NHHLFFADVALKDTGVAELLP+ANT+IFDEAHQLP+TAT+FFG+T+STSQVLELCRDVLA Sbjct: 214 NHHLFFADVALKDTGVAELLPSANTIIFDEAHQLPDTATLFFGETISTSQVLELCRDVLA 273 Query: 121 EGLSHARDGADWAKVVAPVEKAARDLRLAFPEDIVRLAVNQIAPSSVFFPALETLRDNMD 180 EGLSHARDGADWA V PVE+AARDLRL FP+DIVRLAVNQIAPSS FFPALETL++ +D Sbjct: 274 EGLSHARDGADWAGTVTPVERAARDLRLTFPQDIVRLAVNQIAPSSAFFPALETLKEQLD 333 Query: 181 GMIAVLEKQAERAETIEQCRTRAIELSHQLEKWNGAQDKAASEDGQTYVLWVEAFTSSLQ 240 MIAVL+KQAERAETIEQCR RA+EL+ +L+ WN + GQ VLWVEA+++SLQ Sbjct: 334 NMIAVLQKQAERAETIEQCRVRALELAMRLDAWNKPKTTEVI-IGQESVLWVEAYSTSLQ 392 Query: 241 LHRTPLSIAPIFNKQREGVPRTWIFTSATLAVKNDFHHYTSQMGLWDEPAKSWPSPFDYE 300 LH+TPLSIAPIFNKQREG PRTWIFTSATLAVKNDF+HY++QMGLWDEPAKSWPSPF+Y Sbjct: 393 LHQTPLSIAPIFNKQREGTPRTWIFTSATLAVKNDFNHYSAQMGLWDEPAKSWPSPFEYG 452 Query: 301 QQGLLYVPNNLPQPNSYEYTDAVIDAALPAIIAAGGRTFLLCTTIRAVNRAAERLREEFE 360 +QGLLYVP +LPQPNS EYTDAVIDAALP I AAGG FLLCTTIRAVNRAAERLREEFE Sbjct: 453 EQGLLYVPTSLPQPNSPEYTDAVIDAALPVIEAAGGGAFLLCTTIRAVNRAAERLREEFE 512 Query: 361 QRGLPFPLMVQGEAGRTELLDRFRASGNGVLIGSQSFWEGVDVRGDALSLVIIDKLPFSP 420 +R LPFPLMVQGEAGRTELLDRFRA+GN VLIGSQSFWEGVDVRGDALS+VIIDKLPFSP Sbjct: 513 RRKLPFPLMVQGEAGRTELLDRFRAAGNAVLIGSQSFWEGVDVRGDALSVVIIDKLPFSP 572 Query: 421 PDDPVLAARIAELEKKGLNGFVHHQLPAAIINLKQGAGRLIRDETDRGVLMICDPRLISK 480 PDDPVLAARI LE+KG+NGF+HHQLPAAIINLKQGAGRLIRDE D+GVLMICDPRLISK Sbjct: 573 PDDPVLAARIEALERKGMNGFMHHQLPAAIINLKQGAGRLIRDERDKGVLMICDPRLISK 632 Query: 481 GYGRRIWQSLPPFKRTREIGMVEDFFARRAALAAAEE 517 YG+RIWQSLPPFKRTRE+ +V+DFFA A+A E Sbjct: 633 PYGKRIWQSLPPFKRTRELAVVQDFFATIDAVATGTE 669 >A4G4J1.1 A4G4J1_HERAR Putative ATP-dependent helicase Length = 668 Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/517 (83%), Positives = 469/517 (90%), Gaps = 2/517 (0%) Query: 1 MKTTSSGDKAELSKVPENALIWNLVTSTRDTCFGAECQYYQDCFVMKARKEAQQADVVVV 60 MKTTSSGDKAELSKVPE AL+WNLVTSTRDTC GAECQYYQDCFVMKARKEAQQADVVVV Sbjct: 154 MKTTSSGDKAELSKVPETALVWNLVTSTRDTCMGAECQYYQDCFVMKARKEAQQADVVVV 213 Query: 61 NHHLFFADVALKDTGVAELLPTANTVIFDEAHQLPETATMFFGDTVSTSQVLELCRDVLA 120 NHHLFFADVALKDTGVAELLP+ANT+IFDEAHQLPETAT+FFGDT+STS VLELCRDVLA Sbjct: 214 NHHLFFADVALKDTGVAELLPSANTIIFDEAHQLPETATLFFGDTISTSNVLELCRDVLA 273 Query: 121 EGLSHARDGADWAKVVAPVEKAARDLRLAFPEDIVRLAVNQIAPSSVFFPALETLRDNMD 180 EGLSHARDGADWA VV+ VE+AARDLRL FP+DIVRLAVNQIAPSS+FFPALETL+D +D Sbjct: 274 EGLSHARDGADWAGVVSKVERAARDLRLTFPQDIVRLAVNQIAPSSLFFPALETLKDELD 333 Query: 181 GMIAVLEKQAERAETIEQCRTRAIELSHQLEKWNGAQDKAASEDGQTYVLWVEAFTSSLQ 240 GMI+VL+KQAERAETIEQCR R IE++ +L+ WN + K GQ VLWVEAF+SSLQ Sbjct: 334 GMISVLQKQAERAETIEQCRVRGIEIATRLDAWN--KPKGEVIIGQESVLWVEAFSSSLQ 391 Query: 241 LHRTPLSIAPIFNKQREGVPRTWIFTSATLAVKNDFHHYTSQMGLWDEPAKSWPSPFDYE 300 LH+TPLSIAPIFNKQREGVPRTWIFTSATLAVKNDF+HY++QMGLWDEPA SWPSPFDY+ Sbjct: 392 LHQTPLSIAPIFNKQREGVPRTWIFTSATLAVKNDFNHYSAQMGLWDEPAHSWPSPFDYD 451 Query: 301 QQGLLYVPNNLPQPNSYEYTDAVIDAALPAIIAAGGRTFLLCTTIRAVNRAAERLREEFE 360 QGLLYVP LPQPNS +YTDAVIDAALP I AAGG F LCTTIRAVNR AERLREEFE Sbjct: 452 SQGLLYVPTGLPQPNSPDYTDAVIDAALPVIEAAGGGAFFLCTTIRAVNRTAERLREEFE 511 Query: 361 QRGLPFPLMVQGEAGRTELLDRFRASGNGVLIGSQSFWEGVDVRGDALSLVIIDKLPFSP 420 +R LPFPLMVQGEAGRTELLDRFRA+GN VLIGSQSFWEGVDVRGDALS+VIIDKLPFSP Sbjct: 512 RRKLPFPLMVQGEAGRTELLDRFRAAGNAVLIGSQSFWEGVDVRGDALSVVIIDKLPFSP 571 Query: 421 PDDPVLAARIAELEKKGLNGFVHHQLPAAIINLKQGAGRLIRDETDRGVLMICDPRLISK 480 PDDPVLAARI LE+KG+NGF+HHQLPAAIINLKQGAGRLIRDETDRG+LMICDPRLI+K Sbjct: 572 PDDPVLAARIEALERKGMNGFMHHQLPAAIINLKQGAGRLIRDETDRGILMICDPRLIAK 631 Query: 481 GYGRRIWQSLPPFKRTREIGMVEDFFARRAALAAAEE 517 YG+RIWQSLPPFKRTRE+ +V F A + A E Sbjct: 632 PYGKRIWQSLPPFKRTRELDVVRTFLASMEVVLDAAE 668 >D8IZW2.1 D8IZW2_HERSS ATP-dependent DNA helicase protein EC=3.6.1.- Length = 747 Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/534 (79%), Positives = 463/534 (86%), Gaps = 28/534 (5%) Query: 1 MKTTSSGDKAELSKVPENALIWNLVTSTRDTCFGAECQYYQDCFVMKARKEAQQADVVVV 60 +K+TSSGDKAEL+KVPE A +WNLVTSTRDTCFGAECQYYQDCFVMKARKEAQQADVVVV Sbjct: 194 VKSTSSGDKAELTKVPETASVWNLVTSTRDTCFGAECQYYQDCFVMKARKEAQQADVVVV 253 Query: 61 NHHLFFADVALKDTGVAELLPTANTVIFDEAHQLPETATMFFGDTVSTSQVLELCRDVLA 120 NHHLFFADVALKDTG+AELLP+ANTVIFDEAHQLP+TAT+FFG+T+STSQ+LELCRDVLA Sbjct: 254 NHHLFFADVALKDTGIAELLPSANTVIFDEAHQLPDTATLFFGETISTSQILELCRDVLA 313 Query: 121 EGLSHARDGADWAKVVAPVEKAARDLRLAFPEDIVRLAVNQIAPSSVFFPALETLRDNMD 180 EGLSHARDGADWA++VAPVE+AARDLRLAF ED VRLA+NQIAPSS FFPAL+TL+D MD Sbjct: 314 EGLSHARDGADWARLVAPVERAARDLRLAFSEDSVRLALNQIAPSSTFFPALDTLKDCMD 373 Query: 181 GMIAVLEKQAERAETIEQCRTRAIELSHQLEKW--------------------------- 213 MI VLEKQAERAETIEQCR RA EL QLE W Sbjct: 374 DMITVLEKQAERAETIEQCRDRANELLRQLENWGTPEELEKIQAEAAAKAAAKPAEAKRA 433 Query: 214 -NGAQDKAASEDGQTYVLWVEAFTSSLQLHRTPLSIAPIFNKQREGVPRTWIFTSATLAV 272 +G + + S YVLWVEAF SSLQLHRTPLSIAPIFNKQREG PR+WIFTSATLAV Sbjct: 434 ESGDEQQEPSGQKPFYVLWVEAFQSSLQLHRTPLSIAPIFNKQREGTPRSWIFTSATLAV 493 Query: 273 KNDFHHYTSQMGLWDEPAKSWPSPFDYEQQGLLYVPNNLPQPNSYEYTDAVIDAALPAII 332 K DF+HY +QMGLW+ PA+SWPSPF+Y +QG+LYVP NLPQPNS+EYTDAVIDAALP I Sbjct: 494 KKDFNHYAAQMGLWNAPAQSWPSPFNYGEQGILYVPQNLPQPNSFEYTDAVIDAALPIIE 553 Query: 333 AAGGRTFLLCTTIRAVNRAAERLREEFEQRGLPFPLMVQGEAGRTELLDRFRASGNGVLI 392 AAGGR F LCTT+RAVNRAAERLR EFE RG FPL VQGEAGRTELLDRFRA+GNGVLI Sbjct: 554 AAGGRCFFLCTTLRAVNRAAERLRAEFEARGHAFPLFVQGEAGRTELLDRFRAAGNGVLI 613 Query: 393 GSQSFWEGVDVRGDALSLVIIDKLPFSPPDDPVLAARIAELEKKGLNGFVHHQLPAAIIN 452 GSQSFWEGVDVRGDALSLVIIDKLPFSPPDDPVLAARI+E+EK+GLNGFVHHQLPAAIIN Sbjct: 614 GSQSFWEGVDVRGDALSLVIIDKLPFSPPDDPVLAARISEMEKQGLNGFVHHQLPAAIIN 673 Query: 453 LKQGAGRLIRDETDRGVLMICDPRLISKGYGRRIWQSLPPFKRTREIGMVEDFF 506 LKQGAGRLIRDE DRGVLMICDPR+I+K YGRRIWQSLPPFKRTRE +V+ FF Sbjct: 674 LKQGAGRLIRDEGDRGVLMICDPRIITKNYGRRIWQSLPPFKRTREQEVVQAFF 727 >F1VXG1.1 F1VXG1_9BURK DinG family ATP-dependent helicase YoaA Length = 673 Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/509 (81%), Positives = 461/509 (90%), Gaps = 2/509 (0%) Query: 1 MKTTSSGDKAELSKVPENALIWNLVTSTRDTCFGAECQYYQDCFVMKARKEAQQADVVVV 60 MKTTS+GDK+ELS+VPENA+IWNLVTSTRDTC GAECQYYQDCFVMKARKEAQQADVVVV Sbjct: 161 MKTTSTGDKSELSRVPENAMIWNLVTSTRDTCMGAECQYYQDCFVMKARKEAQQADVVVV 220 Query: 61 NHHLFFADVALKDTGVAELLPTANTVIFDEAHQLPETATMFFGDTVSTSQVLELCRDVLA 120 NHHLFFADVALK+TG+AELLP+ANT+IFDEAHQLP+TAT+FFG+T+STSQ++ELCRDV A Sbjct: 221 NHHLFFADVALKETGMAELLPSANTIIFDEAHQLPDTATLFFGETISTSQIIELCRDVQA 280 Query: 121 EGLSHARDGADWAKVVAPVEKAARDLRLAFPEDIVRLAVNQIAPSSVFFPALETLRDNMD 180 EGLSHARDGADWA+VVAPV+KAARDLRL+FP+D++RLAV+QIAPSS FFPAL TL+ + Sbjct: 281 EGLSHARDGADWARVVAPVDKAARDLRLSFPQDVMRLAVSQIAPSSAFFPALVTLQTELQ 340 Query: 181 GMIAVLEKQAERAETIEQCRTRAIELSHQLEKWNGAQDKAAS--EDGQTYVLWVEAFTSS 238 M+AVLEKQAERAETIE CR R IEL +QL W A D AA+ + Q VLWVEAF++S Sbjct: 341 AMVAVLEKQAERAETIELCRVRTIELGNQLAAWVVATDAAATVPDTDQENVLWVEAFSNS 400 Query: 239 LQLHRTPLSIAPIFNKQREGVPRTWIFTSATLAVKNDFHHYTSQMGLWDEPAKSWPSPFD 298 LQLH+TPLSIAPIF+KQREG PR WIFTSATLAVK DF+H+T QMGL D A+SWPSPFD Sbjct: 401 LQLHQTPLSIAPIFSKQREGSPRAWIFTSATLAVKKDFYHFTDQMGLADVTARSWPSPFD 460 Query: 299 YEQQGLLYVPNNLPQPNSYEYTDAVIDAALPAIIAAGGRTFLLCTTIRAVNRAAERLREE 358 YEQQGLLYVP+N+PQPNS +YTDAVIDAALP I AAGGRTFLLCTT+RAV+RAAERLR+E Sbjct: 461 YEQQGLLYVPHNMPQPNSPDYTDAVIDAALPIIEAAGGRTFLLCTTLRAVSRAAERLRDE 520 Query: 359 FEQRGLPFPLMVQGEAGRTELLDRFRASGNGVLIGSQSFWEGVDVRGDALSLVIIDKLPF 418 F +R LPFPLMVQGEAGR ELLDRFRA+GN VLIGSQSFWEGVDVRGDALSLVIIDKLPF Sbjct: 521 FARRNLPFPLMVQGEAGRNELLDRFRAAGNAVLIGSQSFWEGVDVRGDALSLVIIDKLPF 580 Query: 419 SPPDDPVLAARIAELEKKGLNGFVHHQLPAAIINLKQGAGRLIRDETDRGVLMICDPRLI 478 SPPDDPVLAARIA LE+KG NGF+HHQLP AIINLKQGAGRLIRDE+DRGVLM+CDPRL+ Sbjct: 581 SPPDDPVLAARIAALERKGRNGFIHHQLPEAIINLKQGAGRLIRDESDRGVLMLCDPRLL 640 Query: 479 SKGYGRRIWQSLPPFKRTREIGMVEDFFA 507 SK YG+RIWQSLP FKRTRE V FFA Sbjct: 641 SKPYGKRIWQSLPAFKRTRERDAVLSFFA 669 >D8NIQ3.1 D8NIQ3_RALSO Putative ATP-dependent helicase EC=3.6.1.- Length = 714 Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/522 (66%), Positives = 404/522 (77%), Gaps = 16/522 (3%) Query: 1 MKTTSSGDKAELSKVPENALIWNLVTSTRDTCFGAECQYYQDCFVMKARKEAQQADVVVV 60 +KTT +GDKAELS VPENA +WNLVTSTRD C G++C YY+DCFVM+ARKEAQQADVVVV Sbjct: 171 LKTTKTGDKAELSTVPENAPVWNLVTSTRDNCLGSDCAYYKDCFVMRARKEAQQADVVVV 230 Query: 61 NHHLFFADVALKDTGVAELLPTANTVIFDEAHQLPETATMFFGDTVSTSQVLELCRDVLA 120 NHHLFFADV LKDTG+AELLP ANTVIFDEAHQLPETAT+FFGDT+STSQ+LEL RD +A Sbjct: 231 NHHLFFADVMLKDTGMAELLPAANTVIFDEAHQLPETATLFFGDTISTSQLLELARDSVA 290 Query: 121 EGLSHARDGADWAKVVAPVEKAARDLRLAFPEDIVRLAVNQI----APSSVFFPALETLR 176 EGLSHARD DW + AP+E+AARDLRL F +D RL++ QI A F+ L L Sbjct: 291 EGLSHARDAVDWVAIAAPLERAARDLRLVFRQDGARLSMKQIDSDPALGKPFYEVLPKLV 350 Query: 177 DNMDGMIAVLEKQAERAETIEQCRTRAIELSHQLEKWNGAQDK--AASEDGQT------- 227 + LE QAERAETIEQC RA+ L +LE W + A S +G T Sbjct: 351 QALSDFTGALEAQAERAETIEQCHRRAVALCEKLEAWAEPKPAPAAKSAEGDTAGEADAP 410 Query: 228 ---YVLWVEAFTSSLQLHRTPLSIAPIFNKQREGVPRTWIFTSATLAVKNDFHHYTSQMG 284 V WVE FT S+QLH TPLSIAPIF++QR G PR WIFTSATL+V+ +F HY +Q+G Sbjct: 411 VDERVRWVEVFTHSVQLHLTPLSIAPIFSRQRAGQPRAWIFTSATLSVRGNFTHYAAQLG 470 Query: 285 LWDEPAKSWPSPFDYEQQGLLYVPNNLPQPNSYEYTDAVIDAALPAIIAAGGRTFLLCTT 344 L + + + SPFDY QGL+YVP +LPQP+ +TDAV+D ALP I AAGG+TF+LCTT Sbjct: 471 LDRDRSMTLDSPFDYASQGLMYVPRDLPQPSDPRFTDAVLDTALPMIEAAGGKTFVLCTT 530 Query: 345 IRAVNRAAERLREEFEQRGLPFPLMVQGEAGRTELLDRFRASGNGVLIGSQSFWEGVDVR 404 +RAVNRAAERL +EF QRG FPL+VQG+A RTELLDRFRA GN VLIGSQSFWEGVDVR Sbjct: 531 LRAVNRAAERLADEFAQRGWAFPLLVQGQASRTELLDRFRALGNAVLIGSQSFWEGVDVR 590 Query: 405 GDALSLVIIDKLPFSPPDDPVLAARIAELEKKGLNGFVHHQLPAAIINLKQGAGRLIRDE 464 G+ALSLV+IDKLPF+PPDDPVL+AR+ LEKKGL+ F HQLP A+I LKQGAGRLIR E Sbjct: 591 GEALSLVVIDKLPFAPPDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQGAGRLIRSE 650 Query: 465 TDRGVLMICDPRLISKGYGRRIWQSLPPFKRTREIGMVEDFF 506 +DRGVLMICDPRL+ K YGR+IWQSLPPFKRTRE F Sbjct: 651 SDRGVLMICDPRLVEKSYGRQIWQSLPPFKRTREADTAAAFL 692