BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0027.p         (103 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8P3M1.1 D8P3M1_RALSO Putative ferredoxin protein                     134   4e-30
B5SC85.1 B5SC85_RALSO Ferredoxin protein                              133   7e-30
A3RT99.1 A3RT99_RALSO Ferredoxin, 2Fe-2s                              133   7e-30
D8NH59.1 D8NH59_RALSO Putative ferredoxin protein                     132   2e-29
B5S4B6.1 B5S4B6_RALSO Ferredoxin protein                              132   2e-29

>D8P3M1.1 D8P3M1_RALSO Putative ferredoxin protein
          Length = 109

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GGR + D IFHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGRPIEDKIFHRTGLGDVEPE 106


>B5SC85.1 B5SC85_RALSO Ferredoxin protein
          Length = 109

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GGR + D +FHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGRPIEDKVFHRTGLGDVEPE 106


>A3RT99.1 A3RT99_RALSO Ferredoxin, 2Fe-2s
          Length = 109

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GGR + D +FHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGRPIEDKVFHRTGLGDVEPE 106


>D8NH59.1 D8NH59_RALSO Putative ferredoxin protein
          Length = 109

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DAA++ R+V EHL GG  V D IFHR G GDV PE
Sbjct: 69  RNLDAASVRRIVDEHLAGGTPVEDRIFHRTGLGDVEPE 106


>B5S4B6.1 B5S4B6_RALSO Ferredoxin protein
          Length = 109

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/98 (64%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 1   MCTGPRCTEDGVLAEAMFAVLGEQIDARPELRVKRTRTHCMVACKAQAPVVVVYPEGVWY 60
           MCTGPRCT+DG  AEA+F VLG+ IDA   LRVKRTRTHC   CK Q P++VVYP+GVWY
Sbjct: 10  MCTGPRCTQDGAEAEALFKVLGQTIDACEGLRVKRTRTHCFAVCK-QGPLMVVYPDGVWY 68

Query: 61  RCEDAAAIERVVVEHLEGGRQVTDLIFHRLGSGDVNPE 98
           R  DA ++ R+V EHL GGR + D +FHR G GDV PE
Sbjct: 69  RNLDATSVRRIVDEHLAGGRPIEDKVFHRTGLGDVEPE 106