BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0005.p         (166 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A2SDB2.1 A2SDB2_METPP Putative uncharacterized protein                103   1e-20
D8IXR2.1 D8IXR2_HERSS Fe-S protein                                    102   2e-20
B1Y7U7.1 B1Y7U7_LEPCP MOSC domain protein beta barrel domain pro...    89   1e-16
F0GEP6.1 F0GEP6_9BURK Uncharacterized Fe-S protein                     89   2e-16
Q12EG4.1 Q12EG4_POLSJ MOSC-like beta barrel                            89   3e-16

>A2SDB2.1 A2SDB2_METPP Putative uncharacterized protein
          Length = 283

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 5/106 (4%)

Query: 2   ITLSALHIYPIKSCRGISLPQAAVGEFGLNLDRSWMLVDSDGHFLSQREHGRMATISTAL 61
           +T++ LH++P+KSC G+SLP+  + E G   DR+WM+VD+DG FLSQRE  RMA ++T L
Sbjct: 6   VTIAGLHVHPVKSCAGVSLPEVLLIETGFEFDRAWMVVDADGEFLSQRELPRMALVATEL 65

Query: 62  EHDTPALLTVRAPGMADLHLPSRIEDGAGRLAVTIWDDGVEALDCG 107
            H     L +RAPGM  LHL     + A R  V +WDD V A D G
Sbjct: 66  RHSE---LVLRAPGMLALHLALDTAEAATR--VRVWDDEVAAYDMG 106


>D8IXR2.1 D8IXR2_HERSS Fe-S protein
          Length = 280

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 77/144 (53%), Gaps = 16/144 (11%)

Query: 1   MITLSALHIYPIKSCRGISLPQAAVGEFGLNLDRSWMLVDSDGHFLSQREHGRMATISTA 60
           M  LSA+H+YPIKSC G+SL    +G  GL LDR WMLVD  G FL+QR+H  MA I+ A
Sbjct: 1   MSILSAIHLYPIKSCAGLSLTHTPIGPLGLALDRHWMLVDRQGRFLTQRQHPEMACITPA 60

Query: 61  LEHDTPALLTVRAPGMADLHLPSRIEDGAGRLAVTIWDDGVEALDCGAPLPIAGFRITCR 120
            E +    L +RAPGM  L L  + EDG   LAV +W+  ++ALD G            +
Sbjct: 61  FEGER---LVLRAPGMPALSLSMQGEDGEA-LAVQVWNSHLDALDQG------------Q 104

Query: 121 PRCGWCVSIRRPGASAVRAGPATS 144
               WC          VR  PA S
Sbjct: 105 TAAQWCSDYLGEAVRLVRFNPAAS 128


>B1Y7U7.1 B1Y7U7_LEPCP MOSC domain protein beta barrel domain protein
          Length = 290

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 5/106 (4%)

Query: 2   ITLSALHIYPIKSCRGISLPQAAVGEFGLNLDRSWMLVDSDGHFLSQREHGRMATISTAL 61
           + +++LHIYP+KSC GI+L +A + + GL+ DR WM+VD  G F+SQRE  RMA I  +L
Sbjct: 13  LRIASLHIYPVKSCTGITLDEALLADTGLDRDRQWMVVDPQGLFVSQRETPRMALIQVSL 72

Query: 62  EHDTPALLTVRAPGMADLHLPSRIEDGAGRLAVTIWDDGVEALDCG 107
           ++    L   RAPGM  LHLP  ++     + V +WDD + A   G
Sbjct: 73  KNGEAVL---RAPGMLALHLP--LDAAEDPIDVQVWDDRLSACSMG 113


>F0GEP6.1 F0GEP6_9BURK Uncharacterized Fe-S protein
          Length = 290

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 5/110 (4%)

Query: 1   MITLSALHIYPIKSCRGISLPQAAVGEFGLNLDRSWMLVDSDGHFLSQREHGRMATISTA 60
           M  ++ L +YPIKSC G++LP+A + + GL  DR WM+ D++G  ++QR H R+A +  A
Sbjct: 1   MPAIAELFVYPIKSCGGLALPRAQLLDTGLAYDRHWMVTDANGQMITQRTHARLALVQPA 60

Query: 61  LEHDTPALLTVRAPGMADLHLP--SRIEDGAGRLAVTIWDDGVEALDCGA 108
            + DT   L + APGM +L  P           +A T+W D VEA+D GA
Sbjct: 61  FDGDT---LVLNAPGMPELRTPLDGDASSATPTMAATVWRDTVEAIDTGA 107


>Q12EG4.1 Q12EG4_POLSJ MOSC-like beta barrel
          Length = 301

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 10/113 (8%)

Query: 3   TLSALHIYPIKSCRGISLPQAAVGEFGLNLDRSWMLVDSDGHFLSQREHGRMATISTALE 62
            +S L +YP+KSC G+S+ +A + E GL  DR+WM+VD  G FL+QRE  RMA I   L 
Sbjct: 19  VISQLWVYPVKSCAGVSVQEAILTETGLEFDRAWMVVDEKGAFLTQRELPRMALIQPQLR 78

Query: 63  -HDTPALLTVRAPGMADLHLPSRIEDGAGRLAVTIWDDGVEALDCGAPLPIAG 114
            HD    + +RAPGM  LH+   +++  G + V +WDD V A D G   PIA 
Sbjct: 79  YHD----MVLRAPGMLALHVA--LDEVEGPVRVRVWDDEVAAYDMG---PIAA 122