BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0135.p         (99 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IV46.1 D8IV46_HERSS Acetyl-CoA acetyltransferase (Acetoacetyl-...   203   7e-51
A2RPY8.1 A2RPY8_HERSE Acetyl-CoA acetyltransferase (Acetoacetyl-...   203   7e-51
F1VZ03.1 F1VZ03_9BURK 3-ketoacyl-CoA thiolase                         190   5e-47
B4EAU3.1 B4EAU3_BURCJ Putative poly-beta-hydroxy-butyrate storag...   187   4e-46
B4EAG1.1 B4EAG1_BURCJ Acetyl-CoA acetyltransferase EC=2.3.1.9         187   4e-46

>D8IV46.1 D8IV46_HERSS Acetyl-CoA acetyltransferase (Acetoacetyl-CoA
           thiolase) protein EC=2.3.1.9
          Length = 391

 Score =  203 bits (516), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 97/99 (97%), Positives = 99/99 (100%)

Query: 1   VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIAIGHPIGA 60
           VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIA+GHPIGA
Sbjct: 293 VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIALGHPIGA 352

Query: 61  SGCRVLVTLLHEMVRRDAKRGLASLCIGGGMGVALAVER 99
           SGCRVLVTLLHEMVRRDAK+GLASLCIGGGMGVALAVER
Sbjct: 353 SGCRVLVTLLHEMVRRDAKKGLASLCIGGGMGVALAVER 391


>A2RPY8.1 A2RPY8_HERSE Acetyl-CoA acetyltransferase (Acetoacetyl-CoA
           thiolase) protein
          Length = 391

 Score =  203 bits (516), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 97/99 (97%), Positives = 99/99 (100%)

Query: 1   VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIAIGHPIGA 60
           VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIA+GHPIGA
Sbjct: 293 VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIALGHPIGA 352

Query: 61  SGCRVLVTLLHEMVRRDAKRGLASLCIGGGMGVALAVER 99
           SGCRVLVTLLHEMVRRDAK+GLASLCIGGGMGVALAVER
Sbjct: 353 SGCRVLVTLLHEMVRRDAKKGLASLCIGGGMGVALAVER 391


>F1VZ03.1 F1VZ03_9BURK 3-ketoacyl-CoA thiolase
          Length = 391

 Score =  190 bits (483), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 90/99 (90%), Positives = 96/99 (96%)

Query: 1   VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIAIGHPIGA 60
           VPA+QL LKKAGWT  DLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIA+GHPIGA
Sbjct: 293 VPAAQLCLKKAGWTHTDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIALGHPIGA 352

Query: 61  SGCRVLVTLLHEMVRRDAKRGLASLCIGGGMGVALAVER 99
           SGCR+LVTL+HEM+RRDAKRGLASLCIGGGMGVALA+ER
Sbjct: 353 SGCRILVTLIHEMIRRDAKRGLASLCIGGGMGVALAIER 391


>B4EAU3.1 B4EAU3_BURCJ Putative poly-beta-hydroxy-butyrate storage protein
          Length = 397

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 88/99 (88%), Positives = 96/99 (96%)

Query: 1   VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIAIGHPIGA 60
           VPAS+  L++AGWTP DLDLMEINEAFAAQA+AV+KQMGWDTSK+NVNGGAIAIGHPIGA
Sbjct: 294 VPASRRALERAGWTPGDLDLMEINEAFAAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGA 353

Query: 61  SGCRVLVTLLHEMVRRDAKRGLASLCIGGGMGVALAVER 99
           SGCR+LVTLLHEMV+RDAKRGLASLCIGGGMGVALAVER
Sbjct: 354 SGCRILVTLLHEMVKRDAKRGLASLCIGGGMGVALAVER 392


>B4EAG1.1 B4EAG1_BURCJ Acetyl-CoA acetyltransferase EC=2.3.1.9
          Length = 393

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 88/99 (88%), Positives = 96/99 (96%)

Query: 1   VPASQLTLKKAGWTPQDLDLMEINEAFAAQAIAVNKQMGWDTSKINVNGGAIAIGHPIGA 60
           VPAS+  L++AGWTP DLDLMEINEAFAAQA+AV+KQMGWDTSK+NVNGGAIAIGHPIGA
Sbjct: 294 VPASRRALERAGWTPGDLDLMEINEAFAAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGA 353

Query: 61  SGCRVLVTLLHEMVRRDAKRGLASLCIGGGMGVALAVER 99
           SGCR+LVTLLHEMV+RDAKRGLASLCIGGGMGVALAVER
Sbjct: 354 SGCRILVTLLHEMVKRDAKRGLASLCIGGGMGVALAVER 392