BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0119.p         (283 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B2JN50.1 B2JN50_BURP8 Beta-ketoadipyl CoA thiolase EC=2.3.1.16        298   6e-79
D8ISQ5.1 D8ISQ5_HERSS Beta-ketoadipyl-CoA thiolase protein EC=2....   293   1e-77
B2U9F5.1 B2U9F5_RALPJ Beta-ketoadipyl CoA thiolase EC=2.3.1.16        293   2e-77
E2T197.1 E2T197_9RALS Beta-ketoadipyl CoA thiolase                    293   2e-77
E8YT57.1 E8YT57_9BURK Beta-ketoadipyl CoA thiolase EC=2.3.1.174       293   3e-77

>B2JN50.1 B2JN50_BURP8 Beta-ketoadipyl CoA thiolase EC=2.3.1.16
          Length = 400

 Score =  298 bits (763), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 143/176 (81%), Positives = 158/176 (89%)

Query: 63  PRDVPGATINRLCGSGMDAIGIAARAIKSGEAQLMIAGGVESMTRAPFVMGKADSAFSRN 122
           P+DVPG+T+NRLCGSGMDA+GIAARAIKSGEA LMIAGGVESM+RAPFVMGKA SAFSR 
Sbjct: 78  PKDVPGSTVNRLCGSGMDAVGIAARAIKSGEAGLMIAGGVESMSRAPFVMGKATSAFSRQ 137

Query: 123 AAIYDTTIGWRFINPLMKAQYGADAMPETGENVADDYKISRADQDKFAVRSQAKAAAAQQ 182
           A IYDTTIGWRF+NPLMK  YG D+MPETGENVA DY ISRADQD FA+RSQ KAA AQQ
Sbjct: 138 ADIYDTTIGWRFVNPLMKQLYGVDSMPETGENVATDYNISRADQDAFALRSQQKAARAQQ 197

Query: 183 NGILAQEIVPVVIPQKKGEAITVTQDEHPRATSMEALAKLKPIVRPDGSVTAGNAS 238
           +G LAQEIV V IPQKKG+AI V++DEHPR TS+EALAKLK +VRPDG+VTAGNAS
Sbjct: 198 DGTLAQEIVSVTIPQKKGDAIVVSRDEHPRETSLEALAKLKGVVRPDGTVTAGNAS 253


>D8ISQ5.1 D8ISQ5_HERSS Beta-ketoadipyl-CoA thiolase protein EC=2.3.1.16
          Length = 400

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 150/176 (85%), Positives = 163/176 (92%)

Query: 63  PRDVPGATINRLCGSGMDAIGIAARAIKSGEAQLMIAGGVESMTRAPFVMGKADSAFSRN 122
           P++VPG+TINRLCGSGMDA+G AARAIKSGE QLMIAGGVESMTRAPFVMGKADSAFSR 
Sbjct: 78  PQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESMTRAPFVMGKADSAFSRQ 137

Query: 123 AAIYDTTIGWRFINPLMKAQYGADAMPETGENVADDYKISRADQDKFAVRSQAKAAAAQQ 182
           AAI DTTIGWRF+N LMK +YG DAMPET ENVA D+K+SRADQD+FAVRSQAKAAAAQ 
Sbjct: 138 AAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRADQDQFAVRSQAKAAAAQA 197

Query: 183 NGILAQEIVPVVIPQKKGEAITVTQDEHPRATSMEALAKLKPIVRPDGSVTAGNAS 238
           NG LAQEIVPVVIPQKKG+ ITVTQDEHPRATSMEALA+LK +V+PDGSVTAGNAS
Sbjct: 198 NGTLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGVVKPDGSVTAGNAS 253


>B2U9F5.1 B2U9F5_RALPJ Beta-ketoadipyl CoA thiolase EC=2.3.1.16
          Length = 400

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 142/178 (79%), Positives = 158/178 (88%)

Query: 63  PRDVPGATINRLCGSGMDAIGIAARAIKSGEAQLMIAGGVESMTRAPFVMGKADSAFSRN 122
           P  VPG+TINRLCGSGMDA G AARAI+SGE  LMIAGGVESM+RAPFVMGKA SAFSR+
Sbjct: 78  PDSVPGSTINRLCGSGMDATGTAARAIRSGETALMIAGGVESMSRAPFVMGKAASAFSRD 137

Query: 123 AAIYDTTIGWRFINPLMKAQYGADAMPETGENVADDYKISRADQDKFAVRSQAKAAAAQQ 182
           AAIYDTTIGWRFINPLMKAQYG D+MPET ENVA DYK++R DQD+FA+RSQA AA AQ+
Sbjct: 138 AAIYDTTIGWRFINPLMKAQYGVDSMPETAENVATDYKVNREDQDRFALRSQASAARAQE 197

Query: 183 NGILAQEIVPVVIPQKKGEAITVTQDEHPRATSMEALAKLKPIVRPDGSVTAGNASIV 240
           +G LAQEI PV IPQ+KG+AI V +DEHPRATSMEALAKLK +VRPDG+VTAGNAS V
Sbjct: 198 DGTLAQEITPVTIPQRKGDAIVVDRDEHPRATSMEALAKLKGVVRPDGTVTAGNASGV 255


>E2T197.1 E2T197_9RALS Beta-ketoadipyl CoA thiolase
          Length = 400

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 142/178 (79%), Positives = 158/178 (88%)

Query: 63  PRDVPGATINRLCGSGMDAIGIAARAIKSGEAQLMIAGGVESMTRAPFVMGKADSAFSRN 122
           P  VPG+TINRLCGSGMDA G AARAI+SGE  LMIAGGVESM+RAPFVMGKA SAFSR+
Sbjct: 78  PDSVPGSTINRLCGSGMDATGTAARAIRSGETALMIAGGVESMSRAPFVMGKAASAFSRD 137

Query: 123 AAIYDTTIGWRFINPLMKAQYGADAMPETGENVADDYKISRADQDKFAVRSQAKAAAAQQ 182
           AAIYDTTIGWRFINPLMKAQYG D+MPET ENVA DYK++R DQD+FA+RSQA AA AQ+
Sbjct: 138 AAIYDTTIGWRFINPLMKAQYGVDSMPETAENVATDYKVNREDQDRFALRSQASAARAQE 197

Query: 183 NGILAQEIVPVVIPQKKGEAITVTQDEHPRATSMEALAKLKPIVRPDGSVTAGNASIV 240
           +G LAQEI PV IPQ+KG+AI V +DEHPRATSMEALAKLK +VRPDG+VTAGNAS V
Sbjct: 198 DGTLAQEITPVTIPQRKGDAIVVDRDEHPRATSMEALAKLKGVVRPDGTVTAGNASGV 255


>E8YT57.1 E8YT57_9BURK Beta-ketoadipyl CoA thiolase EC=2.3.1.174
          Length = 400

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 141/176 (80%), Positives = 157/176 (89%)

Query: 63  PRDVPGATINRLCGSGMDAIGIAARAIKSGEAQLMIAGGVESMTRAPFVMGKADSAFSRN 122
           P+ VPG+T+NRLCGSGMDA+GIAARAIKSGEA LM+AGGVESM+RAPFVMGKA SAFSR 
Sbjct: 78  PQAVPGSTVNRLCGSGMDAVGIAARAIKSGEAALMVAGGVESMSRAPFVMGKATSAFSRQ 137

Query: 123 AAIYDTTIGWRFINPLMKAQYGADAMPETGENVADDYKISRADQDKFAVRSQAKAAAAQQ 182
           A IYDTTIGWRF+NPLMK  YG D+MPETGENVA DYKISRADQD FA+RSQ KAA AQ+
Sbjct: 138 ADIYDTTIGWRFVNPLMKQMYGVDSMPETGENVATDYKISRADQDAFALRSQQKAARAQK 197

Query: 183 NGILAQEIVPVVIPQKKGEAITVTQDEHPRATSMEALAKLKPIVRPDGSVTAGNAS 238
           +G LAQEIV V I QKKG+ ITV+QDEHPR TS+EALAKLK +VRPDG+VTAGNAS
Sbjct: 198 DGTLAQEIVGVTIAQKKGDPITVSQDEHPRETSLEALAKLKGVVRPDGTVTAGNAS 253