BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0117.p         (63 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q1ILY8.1 Q1ILY8_ACIBL (2Fe-2S)-binding protein                         79   2e-13
B2TAD0.1 B2TAD0_BURPP (2Fe-2S)-binding domain protein                  78   5e-13
E0XSJ1.1 E0XSJ1_9DELT Aerobic-type carbon monoxide dehydrogenase...    77   1e-12
D2QFT0.1 D2QFT0_SPILD (2Fe-2S)-binding domain protein                  76   1e-12
Q89W53.1 Q89W53_BRAJA Blr0840 protein                                  75   5e-12

>Q1ILY8.1 Q1ILY8_ACIBL (2Fe-2S)-binding protein
          Length = 153

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 39/46 (84%)

Query: 5   AAGKKVATVESLSKDNTHPLQKAWIAHDVPQCGYCQSGQLMSAAAL 50
           A GKK+ T+E LS D+THPLQ AW+A DVPQCGYCQSGQ+M AAAL
Sbjct: 67  AVGKKITTIEGLSADSTHPLQVAWVAEDVPQCGYCQSGQIMQAAAL 112


>B2TAD0.1 B2TAD0_BURPP (2Fe-2S)-binding domain protein
          Length = 175

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 37/45 (82%)

Query: 6   AGKKVATVESLSKDNTHPLQKAWIAHDVPQCGYCQSGQLMSAAAL 50
           AGK++ T+E LSKD  HPLQ AW+A DVPQCGYCQSGQLM AAA 
Sbjct: 67  AGKRITTIEGLSKDGRHPLQLAWVAEDVPQCGYCQSGQLMQAAAF 111


>E0XSJ1.1 E0XSJ1_9DELT Aerobic-type carbon monoxide dehydrogenase, small
           subunit coxs/cuts homologs
          Length = 154

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 40/46 (86%)

Query: 5   AAGKKVATVESLSKDNTHPLQKAWIAHDVPQCGYCQSGQLMSAAAL 50
            AGK++ T+E LS+DN+HP+QKAWIA  VPQCGYCQSGQ+++A +L
Sbjct: 65  VAGKEITTIEGLSEDNSHPVQKAWIAEQVPQCGYCQSGQILTAVSL 110


>D2QFT0.1 D2QFT0_SPILD (2Fe-2S)-binding domain protein
          Length = 187

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 39/49 (79%)

Query: 2   ARPAAGKKVATVESLSKDNTHPLQKAWIAHDVPQCGYCQSGQLMSAAAL 50
           A  AAG K+ T+E LSK+  HP+QKAWI H VPQCGYCQSGQ+MSA AL
Sbjct: 83  ASAAAGHKITTIEGLSKNADHPIQKAWIEHQVPQCGYCQSGQIMSAVAL 131


>Q89W53.1 Q89W53_BRAJA Blr0840 protein
          Length = 229

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 37/50 (74%)

Query: 1   MARPAAGKKVATVESLSKDNTHPLQKAWIAHDVPQCGYCQSGQLMSAAAL 50
           M    AGKK+ T+E LS    HPLQKAWIA  VPQCGYCQSGQ+M AA+L
Sbjct: 127 MVGDVAGKKITTIEGLSAKGDHPLQKAWIAEQVPQCGYCQSGQIMQAASL 176