BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0108.p (355 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6SXC5.1 A6SXC5_JANMA Transcriptional regulator, GntR family 520 e-145 F2LQS0.1 F2LQS0_BURGA Transcriptional regulator, GntR family pro... 475 e-132 C5AK05.1 C5AK05_BURGB Transcriptional regulator, GntR family pro... 467 e-129 E1T9Q4.1 E1T9Q4_BURSG Transcriptional regulator, GntR family wit... 465 e-129 B2TF56.1 B2TF56_BURPP Transcriptional regulator, GntR family wit... 458 e-127 >A6SXC5.1 A6SXC5_JANMA Transcriptional regulator, GntR family Length = 477 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 255/354 (72%), Positives = 298/354 (84%) Query: 1 LPALDAFPRKVWNRIAGHRLRTGEPLAMAYPDPAGYGPLRERIATYLGLSRGVACLPEQV 60 LPALDAFPRKVWNR+ GHRLR EP + YPDPAGY LRERIATYLG+SRGV CLPEQV Sbjct: 122 LPALDAFPRKVWNRLVGHRLRGSEPARLGYPDPAGYDRLRERIATYLGVSRGVTCLPEQV 181 Query: 61 FVTAGYRATLELVLRSLATPDDVFWFEDPGYLQAQLFLRNAGAKLAPVPVDGHGLMVEEG 120 F+T G R TLEL L SL+T D FWFEDPGY+ A+ FL+NA K+ PVPVDG+GL+VEEG Sbjct: 182 FITTGLRNTLELTLSSLSTSGDEFWFEDPGYILARPFLQNAAVKVVPVPVDGNGLIVEEG 241 Query: 121 VRRAPDARFALVTPSHQSPLGVTLSLERRMALLEWAGKAGSWIIEDDYDSEFRYQGRPLP 180 R +P A+FA+VTPSHQSPLGVTLSLERRMALLEWA +AGSWIIEDDYDSEFRYQGRPLP Sbjct: 242 KRLSPYAKFAMVTPSHQSPLGVTLSLERRMALLEWASEAGSWIIEDDYDSEFRYQGRPLP 301 Query: 181 ALKSLDRADRVIYCGTFSKVMFPGLRLSYVVVPLGAVQRFHAVCASLNAGCPYLFQAGVA 240 ALKSLDR DRVIY GTFSKVMFPGLRL+YVV P+ AV RF +V +LNAGCPYLFQA VA Sbjct: 302 ALKSLDRNDRVIYSGTFSKVMFPGLRLAYVVAPVSAVARFQSVSYNLNAGCPYLFQASVA 361 Query: 241 DFIAQGHFSRHLKRMRLLYAERRAVFVRALEQVFGNRLQIELQPGGLHIVAGLAAHEDDV 300 DFIA+GHFSRHLK+MR LYAERR V + ++V G+R++I+L+PGGLH++A L HE+DV Sbjct: 362 DFIAEGHFSRHLKKMRSLYAERRLVTQQVFQEVLGDRIRIDLRPGGLHMLAKLGEHENDV 421 Query: 301 LMAERARAAGFGIKSLSSWYLDNEPQRGLLLGFANVADAAMAKRLALKLKKAME 354 L+A++AR AG + LS WY++ +PQ+GLLLGFANV D AKR+ALKLK+A+E Sbjct: 422 LLADKAREAGLALHPLSRWYVNAKPQQGLLLGFANVVDEKDAKRIALKLKQALE 475 >F2LQS0.1 F2LQS0_BURGA Transcriptional regulator, GntR family protein Length = 490 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 236/351 (67%), Positives = 273/351 (77%), Gaps = 5/351 (1%) Query: 1 LPALDAFPRKVWNRIAGHRLRTGEPLAMAYPDPAGYGPLRERIATYLGLSRGVACLPEQV 60 LPALDAFPRKVWNR+ +RLR EP A+AYP P G+ PLRE+IA+YLG+SRGVAC PEQV Sbjct: 131 LPALDAFPRKVWNRLVAYRLRRAEPAALAYPAPLGHAPLREKIASYLGVSRGVACTPEQV 190 Query: 61 FVTAGYRATLELVLRSLATPDDVFWFEDPGYLQAQLFLRNAGAKLAPVPVDGHGLMVEEG 120 FVT+GYRATLELVLR+LA+P D W+EDPGYL A+ FL +AG L PVPVD GL VE G Sbjct: 191 FVTSGYRATLELVLRALASPGDRVWYEDPGYLLARRFLVDAGVSLVPVPVDAQGLDVERG 250 Query: 121 VRRAPDARFALVTPSHQSPLGVTLSLERRMALLEWAGKAGSWIIEDDYDSEFRYQGRPLP 180 + P ARFA+VTPSHQSPLGVTLSL RR+ALL+WA ++GSWIIEDDYDSEFRY GRPLP Sbjct: 251 IALDPQARFAVVTPSHQSPLGVTLSLARRIALLDWASRSGSWIIEDDYDSEFRYTGRPLP 310 Query: 181 ALKSLDRADRVIYCGTFSKVMFPGLRLSYVVVPLGAVQRFHAVCASLNAGCPYLFQAGVA 240 ALKSLDR DRVIYCGTFSKVM PGLRL+YVVVP A+ R +C S+NAG PYL QAGVA Sbjct: 311 ALKSLDRHDRVIYCGTFSKVMVPGLRLAYVVVPERAIARMRRICQSMNAGSPYLLQAGVA 370 Query: 241 DFIAQGHFSRHLKRMRLLYAERRAVFVRALEQVFGNRLQIELQPGGLHIVAGL--AAHED 298 DFIAQGHF+RHLKRMR LYAERR AL + FG RL++EL GG+H+ G +A D Sbjct: 371 DFIAQGHFARHLKRMRTLYAERREFMAEALREAFGARLRVELPAGGMHLAVGFEASAELD 430 Query: 299 DVLMAERARAAGFGIKSLSSWYLDNEPQ---RGLLLGFANVADAAMAKRLA 346 D+ A +AR AG GI +LS WY + + RG +LGFANVA A+ LA Sbjct: 431 DLAFAAQAREAGLGISALSEWYANGRAKPARRGFVLGFANVASRDEARGLA 481 >C5AK05.1 C5AK05_BURGB Transcriptional regulator, GntR family protein Length = 492 Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust. Identities = 240/359 (66%), Positives = 280/359 (77%), Gaps = 5/359 (1%) Query: 1 LPALDAFPRKVWNRIAGHRLRTGEPLAMAYPDPAGYGPLRERIATYLGLSRGVACLPEQV 60 LPALDAFPRKVW+R+ +RLR E ++AYPDP GY LRE+IATYLGLSRGVAC P+QV Sbjct: 133 LPALDAFPRKVWSRLVAYRLRRAETASLAYPDPRGYLLLREKIATYLGLSRGVACTPDQV 192 Query: 61 FVTAGYRATLELVLRSLATPDDVFWFEDPGYLQAQLFLRNAGAKLAPVPVDGHGLMVEEG 120 FVT GYRATLELVLR+LA P + WFEDPGYL A+ FL +AG +L PVPVD GLMVE G Sbjct: 193 FVTGGYRATLELVLRALAAPGERMWFEDPGYLLARRFLVDAGMELVPVPVDAEGLMVERG 252 Query: 121 VRRAPDARFALVTPSHQSPLGVTLSLERRMALLEWAGKAGSWIIEDDYDSEFRYQGRPLP 180 AP+ARFA+VTPSHQSPLGVTLSL RRMALL+WA +AGSW+IEDDYDSEFRY GRPLP Sbjct: 253 AALAPEARFAVVTPSHQSPLGVTLSLSRRMALLDWASRAGSWVIEDDYDSEFRYAGRPLP 312 Query: 181 ALKSLDRADRVIYCGTFSKVMFPGLRLSYVVVPLGAVQRFHAVCASLNAGCPYLFQAGVA 240 ALKSLDR DRVIYCGTFSKVM PGLRL+YVVVP A R +C ++NA PYL QAGVA Sbjct: 313 ALKSLDRHDRVIYCGTFSKVMVPGLRLAYVVVPERATARLLRICQTMNAASPYLLQAGVA 372 Query: 241 DFIAQGHFSRHLKRMRLLYAERRAVFVRALEQVFGNRLQIELQPGGLHIVAGL--AAHED 298 DFIAQGHF+RHLKRMR LYAERR + V AL FG RL+I++ PGG+H+ G AA D Sbjct: 373 DFIAQGHFARHLKRMRALYAERRGLMVEALRDAFGARLRIDVPPGGMHLAIGFEGAAAID 432 Query: 299 DVLMAERARAAGFGIKSLSSWYLDN---EPQRGLLLGFANVADAAMAKRLALKLKKAME 354 D+ A RARAAG G+ +LS WY ++ + +RG +LGFANV D A+R A L++ + Sbjct: 433 DLDFAARARAAGLGVSALSEWYANSRAKQTRRGAVLGFANVIDREAAQRYARALRQVYD 491 >E1T9Q4.1 E1T9Q4_BURSG Transcriptional regulator, GntR family with aminotransferase domain Length = 488 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/364 (64%), Positives = 280/364 (76%), Gaps = 11/364 (3%) Query: 1 LPALDAFPRKVWNRIAGHRLRTGEPLAMAYPDPAGYGPLRERIATYLGLSRGVACLPEQV 60 LPALDAFPRKVW+RI HR R+ + ++ YPDPAG+GPLRER+ATYLGLSRGV C PEQV Sbjct: 127 LPALDAFPRKVWSRIIAHRARSVDLASLTYPDPAGFGPLRERVATYLGLSRGVECAPEQV 186 Query: 61 FVTAGYRATLELVLRSLATPDDVFWFEDPGYLQAQLFLRNAGAKLAPVPVDGHGLMVEEG 120 FVT+GYRA+LEL+LRSL P+D WFE+PGY A+ FL AG KLAPVPVD G+ V+ G Sbjct: 187 FVTSGYRASLELILRSLGKPNDSAWFEEPGYFLARDFLNQAGLKLAPVPVDHDGIDVDAG 246 Query: 121 VRRAPDARFALVTPSHQSPLGVTLSLERRMALLEWAGKAGSWIIEDDYDSEFRYQGRPLP 180 AP ARFA+VTPSHQSPLG TLSL RRM LL+WA + GSWI+EDDYDSEFRY GRPLP Sbjct: 247 QAHAPHARFAIVTPSHQSPLGATLSLARRMKLLDWARRTGSWIVEDDYDSEFRYAGRPLP 306 Query: 181 ALKSLDRADRVIYCGTFSKVMFPGLRLSYVVVPLGAVQRFHAVCASLNAGCPYLFQAGVA 240 ALKSLD RVIYCGTFSKV+FPGLRLSYVVVP A+ RF + AS+NAG PYL QA VA Sbjct: 307 ALKSLDVDGRVIYCGTFSKVLFPGLRLSYVVVPERAIARFAQLTASMNAGPPYLLQAAVA 366 Query: 241 DFIAQGHFSRHLKRMRLLYAERRAVFVRALEQVFGNRLQIELQPGGLHI------VAGLA 294 DFI QGHF+RHLKRMR LYAERR + RALE+ FG +++IE GG+H+ V+G+ Sbjct: 367 DFIVQGHFARHLKRMRALYAERREICARALEKAFGEKVRIERPSGGMHLVMLFNNVSGVP 426 Query: 295 AHEDDVLMAERARAAGFGIKSLSSWYLDNEPQ---RGLLLGFANVADAAMAKRLALKLKK 351 DD+ +A RA+ AG + +LSSW++ + RG++LGFANVAD A A RL +L++ Sbjct: 427 V--DDLAIAARAQEAGLAVSALSSWHIGARTKRTLRGVVLGFANVADEAEATRLVGQLRR 484 Query: 352 AMEG 355 A +G Sbjct: 485 AYDG 488 >B2TF56.1 B2TF56_BURPP Transcriptional regulator, GntR family with aminotransferase domain Length = 509 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 241/362 (66%), Positives = 272/362 (75%), Gaps = 7/362 (1%) Query: 1 LPALDAFPRKVWNRIAGHRLRTGEPLAMAYPDPAGYGPLRERIATYLGLSRGVACLPEQV 60 LPALDAFPRKVWNR+ R R+GE +AYPDP+GY PLRE IATYLGLSRGV CLPEQV Sbjct: 148 LPALDAFPRKVWNRLVAQRARSGERAMLAYPDPSGYRPLREHIATYLGLSRGVTCLPEQV 207 Query: 61 FVTAGYRATLELVLRSLATPDDVFWFEDPGYLQAQLFLRNAGAKLAPVPVDGHGLMVEEG 120 FVT G+RATLELVLRSLA DD WFEDPGYL A+ FL G +L PVPVDG G+ VE G Sbjct: 208 FVTGGFRATLELVLRSLARADDRVWFEDPGYLLARDFLTETGVQLVPVPVDGEGIDVERG 267 Query: 121 VRRAPDARFALVTPSHQSPLGVTLSLERRMALLEWAGKAGSWIIEDDYDSEFRYQGRPLP 180 ARFA+VTPSHQSPLG TLSL RRMALL+WAGKA WIIEDDYDSEFRY GRPLP Sbjct: 268 TLLDAQARFAVVTPSHQSPLGHTLSLARRMALLDWAGKASRWIIEDDYDSEFRYLGRPLP 327 Query: 181 ALKSLDRADRVIYCGTFSKVMFPGLRLSYVVVPLGAVQRFHAVCASLNAGCPYLFQAGVA 240 ALKSLDR DRVIYCGTFSKVMFPGLRL+YVVVP AV+R V S+NAG P L QA VA Sbjct: 328 ALKSLDRRDRVIYCGTFSKVMFPGLRLAYVVVPERAVERVGKVAHSMNAGSPMLLQAAVA 387 Query: 241 DFIAQGHFSRHLKRMRLLYAERRAVFVRALEQVFGNRLQIELQPGGLHIVAGLAAHE--- 297 DFIAQGHF+RHLKRMR LYAERR + V ALE+ FG RL ++L PGG+ A Sbjct: 388 DFIAQGHFARHLKRMRALYAERRVLIVHALEKAFGERLIVDLPPGGIQFAVQFAEGPDGP 447 Query: 298 -DDVLMAERARAAGFGIKSLSSWYLDN---EPQRGLLLGFANVADAAMAKRLALKLKKAM 353 DDV +A RAR AG + LS W+ ++ +RGL++GFAN+ADA A RLA L+ + Sbjct: 448 VDDVAVAARARKAGLAVLPLSIWHANSRARRTRRGLVMGFANIADADEAGRLARTLRACL 507 Query: 354 EG 355 +G Sbjct: 508 DG 509