BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0107.p (249 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q4ZMU7.1 Q4ZMU7_PSEU2 Beta-lactamase 226 2e-57 Q881P9.1 Q881P9_PSESM Beta-lactamase 218 8e-55 C3KD51.1 C3KD51_PSEFS Putative betalactamase 217 1e-54 Q4KD02.1 Q4KD02_PSEF5 Beta-lactamase 215 4e-54 Q1GFD3.1 Q1GFD3_SILST Beta-lactamase 190 2e-46 >Q4ZMU7.1 Q4ZMU7_PSEU2 Beta-lactamase Length = 301 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/212 (55%), Positives = 139/212 (65%) Query: 38 APWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLRHGAGVPNYSELGSYAQAV 97 APWWSFTKTVLAA A+SLV DG + LDAP+P +P+TLRQLLRH AG+ +Y EL Y AV Sbjct: 21 APWWSFTKTVLAATALSLVRDGLIGLDAPIPDQPFTLRQLLRHEAGLADYGELAEYHTAV 80 Query: 98 ARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRLVENATGLSLQHALDQLVL 157 A GD WPA+EM+ R D L ++P GWRYSN GY + RL+E T L+L A+ Q L Sbjct: 81 ASGDPAWPADEMMRRLDGTRLRYSPGTGWRYSNLGYLFIGRLIERLTDLTLDDAVIQRAL 140 Query: 158 TPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAPAAAALLLDRLLTTDFLPP 217 +PLGI NV A+T DL + G+ Y P WVYHGLL+G + AAL LDRLL D L Sbjct: 141 SPLGISNVRFAKTRADLQTTHQGSTSNYDPAWVYHGLLIGPISQAALFLDRLLCADLLST 200 Query: 218 ALLAEMLRKTPLGESLPGRPARNFGYGAGLMN 249 LL EM LG +PGRP GYG GLM Sbjct: 201 GLLQEMQTARTLGGPIPGRPWITPGYGLGLMQ 232 >Q881P9.1 Q881P9_PSESM Beta-lactamase Length = 320 Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 117/232 (50%), Positives = 146/232 (62%) Query: 17 HTAIAIVRDGQLVRGDLQASPAPWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQ 76 H + + +G+ + + PWWSFTK VLA AA+SLV DG + LD P+ P+TLRQ Sbjct: 19 HMFCSTILNGRHLPTEHSDVVVPWWSFTKPVLATAALSLVRDGLIQLDDPVQEGPFTLRQ 78 Query: 77 LLRHGAGVPNYSELGSYAQAVARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLV 136 LL+H AG+ +YSEL Y AVA G PWPA EM+ R DA L +AP WRYSN GY LV Sbjct: 79 LLKHQAGLADYSELPEYHAAVAEGHIPWPAAEMMQRLDATRLRYAPGTAWRYSNVGYLLV 138 Query: 137 RRLVENATGLSLQHALDQLVLTPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLL 196 RL+E T LSL+ AL + VL PLG+ V A+T +DLA + YHP WVYHGLL+ Sbjct: 139 ARLIERITELSLEDALARRVLLPLGVTQVRFAKTQEDLAEVHPASLSSYHPGWVYHGLLV 198 Query: 197 GAPAAAALLLDRLLTTDFLPPALLAEMLRKTPLGESLPGRPARNFGYGAGLM 248 G + + +LLDRLLT LP +LL +M LG +PGRP GYG GLM Sbjct: 199 GPLSESTILLDRLLTGQLLPISLLQDMQHAIALGGPIPGRPWATPGYGLGLM 250 >C3KD51.1 C3KD51_PSEFS Putative betalactamase Length = 319 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 115/229 (50%), Positives = 142/229 (62%) Query: 21 AIVRDGQLVRGDLQASPAPWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLRH 80 ++V +GQL D PWWSFTKTVLAA A+SLV DG + LD P+ +P+TLRQLLRH Sbjct: 28 SLVSNGQLQAADRSELMVPWWSFTKTVLAATALSLVRDGLVGLDDPVLDQPFTLRQLLRH 87 Query: 81 GAGVPNYSELGSYAQAVARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRLV 140 AG+ +Y EL Y AV + WPA+EM+ R D L ++P GWRYSN GY LV L+ Sbjct: 88 EAGLADYGELAEYHSAVKNSEPAWPADEMMQRLDGARLRYSPGNGWRYSNVGYLLVGWLI 147 Query: 141 ENATGLSLQHALDQLVLTPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAPA 200 E T L L A+ Q L+PLG+ +V A+T DL + G+A Y P WVYHGLL+G + Sbjct: 148 ERLTDLKLDEAVIQRTLSPLGLSSVRFAKTRADLQTTHLGSASNYDPAWVYHGLLIGDIS 207 Query: 201 AAALLLDRLLTTDFLPPALLAEMLRKTPLGESLPGRPARNFGYGAGLMN 249 AAL LDRL D L LL EM R LG +PGRP GYG G+M Sbjct: 208 QAALFLDRLFCADLLSTDLLQEMQRARTLGGPIPGRPWITPGYGLGVMQ 256 >Q4KD02.1 Q4KD02_PSEF5 Beta-lactamase Length = 293 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 121/228 (53%), Positives = 144/228 (63%) Query: 21 AIVRDGQLVRGDLQASPAPWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLRH 80 A++ +GQ + PWWSFTKTVL+AAA++LV DG L LD PLP P+TLRQLLRH Sbjct: 4 ALIHNGQPLAPQQPQPLVPWWSFTKTVLSAAALTLVRDGLLGLDEPLPQGPFTLRQLLRH 63 Query: 81 GAGVPNYSELGSYAQAVARGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRLV 140 AG+ +YSEL Y AV R + WP +ML R DA L +AP + WRYSN GY V +L+ Sbjct: 64 QAGLADYSELSDYHDAVLRNEDAWPGAQMLQRLDASRLRYAPGSQWRYSNVGYLFVAQLI 123 Query: 141 ENATGLSLQHALDQLVLTPLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAPA 200 + AT L L AL Q VL PLG+ LA T +DL G YHP WVYHGLL+G A Sbjct: 124 QQATDLPLHLALQQRVLAPLGLSRTRLAVTREDLRDVDLGQLGDYHPGWVYHGLLVGPLA 183 Query: 201 AAALLLDRLLTTDFLPPALLAEMLRKTPLGESLPGRPARNFGYGAGLM 248 AALLLDRLL+ LPPALLA M + LG + GRP GY GLM Sbjct: 184 EAALLLDRLLSGALLPPALLAGMQQAQVLGGPMAGRPWVAPGYAMGLM 231 >Q1GFD3.1 Q1GFD3_SILST Beta-lactamase Length = 297 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 100/211 (47%), Positives = 125/211 (59%) Query: 39 PWWSFTKTVLAAAAMSLVCDGQLTLDAPLPGKPYTLRQLLRHGAGVPNYSELGSYAQAVA 98 P+WSFTKTV+A A+ +V DG+L LDAPL G ++LR LL H AG+P+Y L +Y AVA Sbjct: 29 PYWSFTKTVIAICALRMVQDGRLDLDAPLAGFDFSLRHLLDHTAGLPDYFTLPAYGAAVA 88 Query: 99 RGDAPWPAEEMLARTDADTLLFAPDAGWRYSNTGYFLVRRLVENATGLSLQHALDQLVLT 158 + + PW AE + A T A LFAP GW YSN G+ + R L+E G S L QL+ Sbjct: 89 QNEEPWSAEALRAATMAQGRLFAPGTGWSYSNLGFMVARDLLEEVAGQSFSDLLQQLICA 148 Query: 159 PLGIRNVMLAQTPDDLAISVWGNARGYHPQWVYHGLLLGAPAAAALLLDRLLTTDFLPPA 218 PL +R++ LAQT D W A+ YHP WVYHG L G A AA LL L L Sbjct: 149 PLELRSITLAQTRRDFERVHWAAAKRYHPGWVYHGCLTGTAADAARLLQGLFEGTLLDAE 208 Query: 219 LLAEMLRKTPLGESLPGRPARNFGYGAGLMN 249 +L EM + PLG + GRP GY GLM+ Sbjct: 209 MLREMRKSHPLGGVIEGRPWTECGYALGLMS 239