BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0090.p (317 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRZ2.1 D8IRZ2_HERSS ABC-type glutamate/aspartate transport sys... 345 7e-93 F1VZ16.1 F1VZ16_9BURK Glutamate Aspartate periplasmic binding pr... 344 8e-93 A4Z0X2.1 A4Z0X2_BRASO Glutamate/aspartate ABC transporter (Subst... 287 1e-75 Q11MM9.1 Q11MM9_MESSB Amino acid ABC transporter substrate-bindi... 283 2e-74 Q2RSK8.1 Q2RSK8_RHORT Extracellular solute-binding protein, fami... 280 2e-73 >D8IRZ2.1 D8IRZ2_HERSS ABC-type glutamate/aspartate transport system, periplasmic component protein Length = 315 Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 172/314 (54%), Positives = 227/314 (72%), Gaps = 8/314 (2%) Query: 4 IVMALCLMSSQVAHIAHAAPDEDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEGY 63 +V A LMSS HA E+ TG LKKIK+ G L LGVRDS+ PFSYL+DKQSY+GY Sbjct: 10 LVGASVLMSS-----VHA---EEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQGY 61 Query: 64 AVDLCLAIAKNIQRKLGVSQLTISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIVE 123 ++DLCL A IQ+KLG++ L I M+PVTS++RIPLI NGT DI C + TN ER N V Sbjct: 62 SIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQVA 121 Query: 124 FSPTYYVSGSRILSKRSSNIKTLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIASR 183 FS T +V+ ++ LSK+++N+KTL DL+GK + SGT+++K ++ LN E+ LG++I+A++ Sbjct: 122 FSVTEFVTANKFLSKKAANLKTLEDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAAK 181 Query: 184 DTAEGMLLVETGRAAAFINDDIVLASLAGGSKISSELVVGKEALSVEPFGLIYRKNDPAF 243 D AE L+VETGRAAAF+ DDI+L+SLA SK + V EALSVEP+GLI K D F Sbjct: 182 DHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPGDYQVSSEALSVEPYGLILPKGDKEF 241 Query: 244 KQIVDTSISTIFKSGDINKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNPADY 303 K +VD +++ ++K DI KIYAKWFQSP P G NLN PMSP+ QA +AK T+S +PA Y Sbjct: 242 KTVVDDALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAAY 301 Query: 304 AAIPKEQLSTIKKK 317 A +P+ Q + KKK Sbjct: 302 AVVPEAQKNMGKKK 315 >F1VZ16.1 F1VZ16_9BURK Glutamate Aspartate periplasmic binding protein gltI Length = 313 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 168/316 (53%), Positives = 235/316 (74%), Gaps = 3/316 (0%) Query: 1 MKKIVMALCLMSSQVAHIAHAAPDEDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSY 60 MK M L L+ S + IA AA ++ TGTLKKIK+ G + LGVRDS+ PFSYL+DKQSY Sbjct: 1 MKLAKMMLVLIGSGL--IASAAQAQE-TGTLKKIKDSGQITLGVRDSSIPFSYLDDKQSY 57 Query: 61 EGYAVDLCLAIAKNIQRKLGVSQLTISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQN 120 +GY++D+C+ I +IQ++LG++ L + + PVTS++RIPL+ NGTVD+ CG+ TN ERQ Sbjct: 58 QGYSIDICMKIVTSIQKELGMTSLNVKLNPVTSATRIPLMANGTVDLVCGSATNNIERQK 117 Query: 121 IVEFSPTYYVSGSRILSKRSSNIKTLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDII 180 V F+PT +V+ +R+L+K+SSNIKTL D++GK L SGT+++K + LN ++ LG++++ Sbjct: 118 QVSFAPTTFVTANRLLAKKSSNIKTLDDMKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVM 177 Query: 181 ASRDTAEGMLLVETGRAAAFINDDIVLASLAGGSKISSELVVGKEALSVEPFGLIYRKND 240 ++D AE L+VETGRA AF DDI+LASLA SK ++ + EALS EP+G++ R+ D Sbjct: 178 TAKDHAEAFLMVETGRAVAFGMDDILLASLAASSKSPADYSITTEALSTEPYGIMLRRED 237 Query: 241 PAFKQIVDTSISTIFKSGDINKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNP 300 PAFK+ VDT++ +FKSGDIN+IYAKWFQSP P G NLN PMS + +A IA T+S +P Sbjct: 238 PAFKKSVDTAVINLFKSGDINRIYAKWFQSPIPPKGINLNIPMSDQLKAVIAHPTDSGDP 297 Query: 301 ADYAAIPKEQLSTIKK 316 A YAA+P+ Q + KK Sbjct: 298 AAYAAVPEAQKGSTKK 313 >A4Z0X2.1 A4Z0X2_BRASO Glutamate/aspartate ABC transporter (Substrate binding protein) Length = 304 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 136/280 (48%), Positives = 198/280 (70%), Gaps = 1/280 (0%) Query: 25 EDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEGYAVDLCLAIAKNIQRKLGVSQL 84 EDLTGTLK IKE G + LGVRDS+ PFSYL+D Q G+A+D+C+ I ++++L + +L Sbjct: 23 EDLTGTLKTIKETGAITLGVRDSSIPFSYLDDNQKPVGFAIDICMGIVDAVKKELKLDKL 82 Query: 85 TISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIVEFSPTYYVSGSRILSKRSSNIK 144 + + PVTSS+RIPL+ NGT+D+ECG+TTN AERQ + F+ T++++ SR +SK++SNI Sbjct: 83 EVKLNPVTSSTRIPLLANGTIDLECGSTTNNAERQKQISFTNTHFLTASRYVSKKASNIT 142 Query: 145 TLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIASRDTAEGMLLVETGRAAAFINDD 204 + DL+GK + +GTT+IK ++ N + LGI+II ++D AE L+VET RA AF+ DD Sbjct: 143 KIDDLKGKPVVSTAGTTNIKQLTEANAARGLGINIIPAKDHAEAFLMVETDRAVAFVMDD 202 Query: 205 IVLASLAGGSKISSELVVGKEALS-VEPFGLIYRKNDPAFKQIVDTSISTIFKSGDINKI 263 I+LASL SK + V+ +A S EP+G++ RK+DP FK++VD + + I+ SG+ K+ Sbjct: 203 ILLASLVASSKDPAAYVISSDAFSKPEPYGIMLRKDDPQFKKVVDAATAKIYTSGEGAKL 262 Query: 264 YAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNPADY 303 Y KWF P G NLN P+S E +A AK ++SP+P Y Sbjct: 263 YDKWFMQKIPPKGLNLNTPISAELKAEFAKPSDSPDPESY 302 >Q11MM9.1 Q11MM9_MESSB Amino acid ABC transporter substrate-binding protein, PAAT family Length = 303 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 204/297 (68%), Gaps = 1/297 (0%) Query: 8 LCLMSSQVAHIAHAAPDEDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEGYAVDL 67 LC + + + A +DLTGTLKKIK+ GV+ +G RDS+ PFSYL+DKQ GYAVD+ Sbjct: 5 LCAFAVVMTAMCGGASADDLTGTLKKIKDTGVITVGNRDSSVPFSYLDDKQQPVGYAVDI 64 Query: 68 CLAIAKNIQRKLGVSQLTISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIVEFSPT 127 CL + ++ +L + +L + PVTS++RIPLI NGTVD+ECG+T NTAERQ V FS T Sbjct: 65 CLKVVDAVKERLKLDKLEVRFNPVTSATRIPLIANGTVDLECGSTFNTAERQKQVAFSNT 124 Query: 128 YYVSGSRILSKRSSNIKTLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIASRDTAE 187 Y+++ +R ++K+SSN+ ++ADL+G+ + SGT +I+ ++ +N Q+LG++IIA+ D AE Sbjct: 125 YFLTANRFVAKKSSNLNSIADLKGQSVVSTSGTVNIQELNEVNTAQQLGMNIIAANDHAE 184 Query: 188 GMLLVETGRAAAFINDDIVLASLAGGSKISSELVVGKEALS-VEPFGLIYRKNDPAFKQI 246 L+VETGRAAAF+ DDI+LASL GS+ S + ++A S +P+ ++ R++D FK++ Sbjct: 185 AFLMVETGRAAAFVMDDILLASLVAGSRDPSGYAISQDAFSNPQPYAIMLRRDDAEFKEL 244 Query: 247 VDTSISTIFKSGDINKIYAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNPADY 303 VD + + ++KS ++ IY KWF P G NLN P+ P + A ++S + A Y Sbjct: 245 VDDATAALYKSPEMLDIYNKWFNQAIPPRGLNLNVPLDPALKRAFENPSDSADTASY 301 >Q2RSK8.1 Q2RSK8_RHORT Extracellular solute-binding protein, family 3 Length = 305 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 201/282 (71%), Gaps = 1/282 (0%) Query: 25 EDLTGTLKKIKEKGVLVLGVRDSTKPFSYLNDKQSYEGYAVDLCLAIAKNIQRKLGVSQL 84 E+LTGTLKKIKE G + +G RDS+ PFSYL+D Q GYA+D+C + + ++ +L + L Sbjct: 23 EELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELKLDTL 82 Query: 85 TISMLPVTSSSRIPLIQNGTVDIECGNTTNTAERQNIVEFSPTYYVSGSRILSKRSSNIK 144 + + PVTS++RIPLI NGTVD+ECG+TTN +RQ F+ +++++ SR +SK++SN+K Sbjct: 83 AVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQASFTNSHFLTASRFVSKKTSNLK 142 Query: 145 TLADLRGKKLAINSGTTHIKMVSTLNDEQKLGIDIIASRDTAEGMLLVETGRAAAFINDD 204 ++ DL+GK + +GTT+IK V+ LN + LGI II ++D AEG L+VET RA AF DD Sbjct: 143 SIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPAKDHAEGFLMVETDRAVAFAMDD 202 Query: 205 IVLASLAGGSKISSELVVGKEALSV-EPFGLIYRKNDPAFKQIVDTSISTIFKSGDINKI 263 I+LA+L GSK S V+ ++A S+ EP+G++ RK+DPAFK +VD + + ++ S + K+ Sbjct: 203 ILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDPAFKAVVDRATAALYTSPEGPKL 262 Query: 264 YAKWFQSPALPHGQNLNWPMSPETQAAIAKITNSPNPADYAA 305 +AKWF++P P G N+N P++ + A+A ++S +P Y A Sbjct: 263 FAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSADPKAYLA 304