BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0066.p (381 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9TEH4.1 B9TEH4_RICCO UDP-4-amino-4-deoxy-L-arabinose--oxoglutar... 254 1e-65 E1QIZ3.1 E1QIZ3_DESB2 DegT/DnrJ/EryC1/StrS aminotransferase 251 1e-64 Q8YZC3.1 Q8YZC3_NOSS1 DegT/DnrJ/EryC1/StrS family 192 8e-47 Q39T67.1 Q39T67_GEOMG DegT/DnrJ/EryC1/StrS aminotransferase 187 3e-45 Q748I1.1 Q748I1_GEOSL DegT/DnrJ/EryC1/StrS family protein 184 2e-44 >B9TEH4.1 B9TEH4_RICCO UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase, putative Length = 352 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 152/345 (44%), Positives = 200/345 (57%), Gaps = 5/345 (1%) Query: 22 FRDIFTRQYYTNHGPLAQRLEARLAEYLSVAHAMCITNEAIALCLAAQALRLHGKVLVPG 81 RDIF R+YYTN GPLA+ EARL +L V HA+C+ N I L +A AL G LVP Sbjct: 1 MRDIFERRYYTNQGPLAREFEARLQRFLDVHHAVCVANATIGLMMAFDALAARGCALVPA 60 Query: 82 ISDIFTAQSLAWADAEPVFCDVDADTGMLSAEAAKIHLEKGGINAILAVNAWGGAADASA 141 + +LAW V CD + G LS E A + G + ++ N WGGA DA+A Sbjct: 61 AGNPALLHALAWCGVGAVACDAETANGQLSIERAARLIADGKPDVLVGANLWGGACDAAA 120 Query: 142 LQELADRYDIPLYFDSSQAFGSSTDGVSLGGRGRLEVFSLQSAHVLSCGEGAFIATNDDD 201 L+ L D++ IP+ FDS QAFGS+ GV G G +EVFS VL G GA + T+DD Sbjct: 121 LRSLGDQHRIPVLFDSLQAFGSTVSGVRAGAAGCIEVFSFGLDDVLYAGGGACVVTDDDA 180 Query: 202 LAAHVRNIRSNYGMGRPVPVVKTSNGRFSEAQAAIALMSFDDLEIHIANNGLLAARYAAS 261 +AA +RNIRS+YG G PV V +TSNGR SEAQAA+ L+ DD H A+N L Y Sbjct: 181 IAARLRNIRSSYGAGAPVSVERTSNGRMSEAQAALGLIGLDDFATHQAHNRKLFDAYRDG 240 Query: 262 LSGIPGVTIRKAVGVDRSNQQCLMLAIDEVQFGLSAQALRKVLRAENIESSSRLASGWYR 321 L+ I GV + + RSN Q L+ ID G++ L ++L A ++E+ + +A+G R Sbjct: 241 LASIAGVRVIEPSRAVRSNHQTLVCEIDVDSCGVTRDQLIQILSANHVEARA-VAAGEVR 299 Query: 322 HGTHAVSVGALPIADSLCASLLELPIGAKTDADKVALIADIIRQA 366 G HA S LP A + AS L LPIGA+ VA+I ++I A Sbjct: 300 -GAHAQS---LPAAARIGASWLLLPIGARVSVADVAVIVELIASA 340 >E1QIZ3.1 E1QIZ3_DESB2 DegT/DnrJ/EryC1/StrS aminotransferase Length = 407 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 138/366 (37%), Positives = 210/366 (57%), Gaps = 5/366 (1%) Query: 3 QLLRPGQEYFPEWSRYEIAFRDIFTRQYYTNHGPLAQRLEARLAEYLSVAHAMCITNEAI 62 Q L GQ P+W R++ AF ++F R+++TNHGPL ++LE RLAE+L V H +C+TN + Sbjct: 19 QPLHVGQLNLPDWPRFQQAFEELFRRRWFTNHGPLVRQLEQRLAEFLDVRHVVCMTNGTL 78 Query: 63 ALCLAAQALRLHGKVLVPGISDIFTAQSLAWADAEPVFCDVDADTGMLSAEAAKIHLEKG 122 AL +A QAL L G+V+ P + T Q+L WA EP+FCDVD +++A+ A+ +E G Sbjct: 79 ALMVALQALDLRGRVIAPAFTFPATVQALTWAGLEPLFCDVDEKRHVITADLARPLIEDG 138 Query: 123 GINAILAVNAWGGAADASALQELADRYDIPLYFDSSQAFGSSTDGVSLGGRGRLEVFSLQ 182 ++AIL V+ WG D AL +LA R+ + L FD++ AFG + +G +GG GR+E+FS Sbjct: 139 -VSAILGVHLWGRPCDPEALADLAQRHGLALLFDAAHAFGCAHNGRLIGGLGRVEIFSFH 197 Query: 183 SAHVLSCGEGAFIATNDDDLAAHVRNIRSNYGMGRPVPVVKTSNGRFSEAQAAIALMSFD 242 + VL+ EG T+DD++AA +R +R+ + V N + SEAQAA+AL+S + Sbjct: 198 ATKVLNAAEGGCATTDDDEMAARLRTVRNFHNQETFARVGARINAKMSEAQAAMALLSLE 257 Query: 243 DLEIHIANNGLLAARYAASLSGIPGVTIRKAVGVDRSNQQCLMLAIDEVQFGLSAQALRK 302 D + N YA L+G+PG+ + N+Q ++L +D Q GLS L Sbjct: 258 DYPRNAQANQRALDAYAHGLAGLPGLELLDPNLPQAHNRQFVVLDVDAQQAGLSRDELTA 317 Query: 303 VLRAENIESSSRLASGWYR----HGTHAVSVGALPIADSLCASLLELPIGAKTDADKVAL 358 L AEN+ + G +R + + V LP+ D L A L++LP G +A Sbjct: 318 ALEAENVLARRYFMPGIHRSPPYNRLYPHFVEGLPVTDRLSARLMQLPSGQAVAEHDIAT 377 Query: 359 IADIIR 364 + + R Sbjct: 378 VCALTR 383 >Q8YZC3.1 Q8YZC3_NOSS1 DegT/DnrJ/EryC1/StrS family Length = 406 Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 115/367 (31%), Positives = 188/367 (51%), Gaps = 21/367 (5%) Query: 24 DIFTRQYYTNHGPLAQRLEARLAEYLSVAHAMCITNEAIALCLAAQALRLHGKVLVPGIS 83 DI R++ TN+G Q E ++AE++ V H + N +AL +A +A+ G+V++P + Sbjct: 40 DILDRKWLTNNGIYVQEFERQIAEFVGVKHCIATCNATVALEIAIRAVGFTGEVIIPSFT 99 Query: 84 DIFTAQSLAWADAEPVFCDVDADTGMLSAEAAKIHLEKGGINAILAVNAWGGAADASALQ 143 I TA +L W + PVFCD+D T + + I+ V+ WG + AL Sbjct: 100 FIATAHALKWQEIIPVFCDIDPHTHNIDPNKI-VQSITPRTTGIIGVHLWGRPCNVEALS 158 Query: 144 ELADRYDIPLYFDSSQAFGSSTDGVSLGGRGRLEVFSLQSAHVLSCGEGAFIATNDDDLA 203 E+AD +++ L FD++ AFG S G +G G EVFS + L+ EG I TN D+LA Sbjct: 159 EIADTHNLKLMFDAAHAFGCSHQGRMIGSFGDAEVFSFHATKFLNTFEGGAIVTNSDELA 218 Query: 204 AHVRNIRSNYGM-GRPVPVVKTSNGRFSEAQAAIALMSFDDLEIHIANNGLLAARYAASL 262 +R + +N+G G + +NG+ +E AA+ L D+L+ I N Y +L Sbjct: 219 EKIR-LMTNFGFAGYDRVIYIGTNGKMNEVSAAMGLTGLDNLDEFIFINCRNYKYYERAL 277 Query: 263 SGIPGVTIRKAVGVDRSNQQCLMLAIDEVQFGLSAQALRKVLRAENIESSSRLASGWYRH 322 IPG+ + V++SN Q ++L IDEV G+S L ++L+AEN+ +A ++ Sbjct: 278 KDIPGIKLINYDEVEKSNYQYIILEIDEVLMGISRDKLLEILQAENV-----MARRYFYP 332 Query: 323 GTHAV---------SVGALPIADSLCASLLELPIGAKTDADKVALIADIIR----QAHIQ 369 G H + S LP ++L ++ LP G + + I +II+ + Sbjct: 333 GCHNMEPYRSYFPYSKLLLPETENLTKRIMSLPTGTSVSLEDITKIVEIIKLVVENNNFL 392 Query: 370 ADRVRNV 376 D++RN+ Sbjct: 393 QDKLRNL 399 >Q39T67.1 Q39T67_GEOMG DegT/DnrJ/EryC1/StrS aminotransferase Length = 404 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 119/345 (34%), Positives = 174/345 (50%), Gaps = 7/345 (2%) Query: 25 IFTRQYYTNHGPLAQRLEARLAEYLSVAHAMCITNEAIALCLAAQALRLHGKVLVPGISD 84 I R++ TN+G Q E RL L V H + + N +AL + +AL + G+V+VP + Sbjct: 43 ILDRRWLTNNGICVQEFERRLEALLGVKHCIAMCNATVALEITIRALGMTGEVIVPSFTF 102 Query: 85 IFTAQSLAWADAEPVFCDVDADTGMLSAEAAKIHLEKGGINAILAVNAWGGAADASALQE 144 + T SL W PVFCD+D +T + + L I+ V+ WG AL E Sbjct: 103 VATPHSLQWQQITPVFCDIDPETHSIDPRRVE-SLITPRTTGIIGVHLWGKPCKIEALAE 161 Query: 145 LADRYDIPLYFDSSQAFGSSTDGVSLGGRGRLEVFSLQSAHVLSCGEGAFIATNDDDLAA 204 +A R ++ L FD++ AFG S +G +G G EVFS + + EG +ATNDDDLAA Sbjct: 162 IAGRRNLRLLFDAAHAFGCSHNGRMIGSFGDAEVFSFHATKFFNTFEGGAVATNDDDLAA 221 Query: 205 HVRNIRSNYGM-GRPVPVVKTSNGRFSEAQAAIALMSFDDLEIHIANNGLLAARYAASLS 263 +R + N+G G V +NG+ SE AA+ L S D LE I N A YA+ L+ Sbjct: 222 RIR-LMKNFGFAGYDNVVYIGTNGKMSEISAAMGLTSLDHLEEIITINRRNYAAYASGLA 280 Query: 264 GIPGVTIRKAVGVDRSNQQCLMLAIDEVQFGLSAQALRKVLRAENIESSSRLASGWYR-- 321 + G+ + G DR N Q ++L +DE G+ L + L AENI + G +R Sbjct: 281 NVQGIRLVPYEGADRYNYQYVVLEVDEQAAGIHRDMLLQALHAENIMARRYFYPGCHRME 340 Query: 322 -HGTHAVSVGA-LPIADSLCASLLELPIGAKTDADKVALIADIIR 364 + ++ + G LP + L +L LP G + + I IIR Sbjct: 341 PYRSYFPNAGMLLPETERLAERVLSLPTGTAVSEEDIVDICSIIR 385 >Q748I1.1 Q748I1_GEOSL DegT/DnrJ/EryC1/StrS family protein Length = 394 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/347 (30%), Positives = 183/347 (52%), Gaps = 7/347 (2%) Query: 24 DIFTRQYYTNHGPLAQRLEARLAEYLSVAHAMCITNEAIALCLAAQALRLHGKVLVPGIS 83 D+ R++ TN+GP Q LE +++E+L V + + + N IAL + +AL + G+V+VP + Sbjct: 42 DMLDRRWLTNNGPFVQELEQKMSEFLGVRNCIAMCNATIALEITTRALGMSGEVIVPPFT 101 Query: 84 DIFTAQSLAWADAEPVFCDVDADTGMLSAEAAKIHLEKGGINAILAVNAWGGAADASALQ 143 + TA +L W + PVFCD+D T + + + + I+ V+ WG + L Sbjct: 102 FVATAHALQWQEITPVFCDIDPTTHHIDPKKIESMITP-RTTGIVGVHLWGRPCAVNTLT 160 Query: 144 ELADRYDIPLYFDSSQAFGSSTDGVSLGGRGRLEVFSLQSAHVLSCGEGAFIATNDDDLA 203 E+A ++ + L FD++ AFG S G +GG G EVFS + + EG +AT++D+LA Sbjct: 161 EIAAKHKLKLIFDAAHAFGCSHGGRMIGGFGDAEVFSFHATKFFNTFEGGLVATDNDELA 220 Query: 204 AHVRNIRSNYGM-GRPVPVVKTSNGRFSEAQAAIALMSFDDLEIHIANNGLLAARYAASL 262 +R + N+G G + +NG+ +E AA+ L + + L+ I N RY L Sbjct: 221 QKIR-LMKNFGFEGYDNVIYIGTNGKMTEICAAMGLTNLESLDEFIQTNHTNYYRYRQGL 279 Query: 263 SGIPGVTIRKAVGVDRSNQQCLMLAIDEVQFGLSAQALRKVLRAENIESSSRLASGWYRH 322 SG+PGV++ + +R+N Q ++L IDE G+S L + L A+N+ + G +R Sbjct: 280 SGLPGVSVIEYNEAERNNYQYVVLEIDEKMAGVSRDRLVEALHAKNVIARRYFYPGCHRM 339 Query: 323 GTHAV----SVGALPIADSLCASLLELPIGAKTDADKVALIADIIRQ 365 + S LP + L ++ LP G + + + I +I++ Sbjct: 340 EPYRSYFPHSRLLLPKTERLARRVMLLPTGTAVELEHIDAICVLIKR 386