BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0060.p (365 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q1LCN1.1 Q1LCN1_RALME Aminotransferase, DegT/DnrJ/EryC1/StrS family 513 e-143 D5CN07.1 D5CN07_SIDLE DegT/DnrJ/EryC1/StrS aminotransferase 507 e-141 B9CIL6.1 B9CIL6_9BURK DegT/DnrJ/EryC1/StrS aminotransferase 503 e-140 B9C0C5.1 B9C0C5_9BURK DegT/DnrJ/EryC1/StrS aminotransferase 503 e-140 B3PVC4.1 B3PVC4_RHIE6 Putative nucleotide sugar transaminase pro... 501 e-140 >Q1LCN1.1 Q1LCN1_RALME Aminotransferase, DegT/DnrJ/EryC1/StrS family Length = 381 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 247/360 (68%), Positives = 291/360 (80%), Gaps = 1/360 (0%) Query: 3 VTQPFLPPLEEFVAYLQQIWANKHITNNGPFHQQLEAALADYLGVKYVCLFSNGTLALIT 62 VTQP LPPL+EF+ YLQQIW ++ +TN GPFHQQ E L +YLGV Y+ LF+NGTLAL+T Sbjct: 20 VTQPHLPPLDEFLPYLQQIWNSRVLTNGGPFHQQFERELCEYLGVPYLSLFANGTLALVT 79 Query: 63 ALQALGITGEAITSPYSFVATSHALIWNGIKPVFADIDKDTLLLDPAKIEAAITEHTTAI 122 ALQAL ITGE IT+PYSFVAT+H+L+WNG+KPVF DID T+ LDPAKIEAAIT TTAI Sbjct: 80 ALQALRITGEVITTPYSFVATAHSLLWNGVKPVFVDIDPHTMNLDPAKIEAAITPQTTAI 139 Query: 123 VPVHCYGYPCKVEAIQKIADKYKLKVIYDAAHAFGVQYKSSSVLTYGDLSILSFHATKVF 182 +PVHCYG+PC V+AIQKIAD Y L+VIYDAAHAFGV+ +S S+L +GDLSILS HATKVF Sbjct: 140 MPVHCYGHPCDVDAIQKIADNYNLRVIYDAAHAFGVRNESGSILKHGDLSILSLHATKVF 199 Query: 183 NTFEGGAIICHNAEMKLRIDQLKNFGTVDEVTVVAAGINGKMSEVNAAMGLLQLQYMDEI 242 NTFEGGAIIC +A+ K RID LKNFG VDEVTVVAAGINGKMSE+NAA GLLQLQ++DE Sbjct: 200 NTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAAGINGKMSEINAAFGLLQLQHIDEA 259 Query: 243 LTQRKAIDAQYRSLLSAVKHIDCLQPPEHTSAWNYSYFPILVRPGYPISRDALYTKMREQ 302 L +RKAIDA+YR LL + I C T+A NY+YFPI V YPISRDAL+ K REQ Sbjct: 260 LERRKAIDARYRELLRNIPGIRCQADAGETTA-NYAYFPIHVEADYPISRDALFDKFREQ 318 Query: 303 NIFPRRYFYPLISEFPMYRNLASSVPENLPVATEITQQILCLPIYPGLNIDHIRQVADII 362 IF RRYFYPLIS+FPMYR L S+ NLP+A+E ++LCLPIYP L + +++V II Sbjct: 319 GIFARRYFYPLISDFPMYRGLPSASRHNLPIASEAALKVLCLPIYPALTEEQVQRVVSII 378 >D5CN07.1 D5CN07_SIDLE DegT/DnrJ/EryC1/StrS aminotransferase Length = 370 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 243/360 (67%), Positives = 287/360 (79%), Gaps = 1/360 (0%) Query: 3 VTQPFLPPLEEFVAYLQQIWANKHITNNGPFHQQLEAALADYLGVKYVCLFSNGTLALIT 62 VT+P LPPLEEF+ YLQQIW ++ +TN G FHQQLE AL +YLGVKY+ LF+NGT+ L+T Sbjct: 10 VTKPVLPPLEEFLPYLQQIWDSRILTNGGSFHQQLEQALCEYLGVKYISLFTNGTIGLVT 69 Query: 63 ALQALGITGEAITSPYSFVATSHALIWNGIKPVFADIDKDTLLLDPAKIEAAITEHTTAI 122 ALQAL ITGE IT+PYSFVAT+H+L+WNGIKPVF DID DTL LDPAKIEAAIT TTAI Sbjct: 70 ALQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPDTLNLDPAKIEAAITPSTTAI 129 Query: 123 VPVHCYGYPCKVEAIQKIADKYKLKVIYDAAHAFGVQYKSSSVLTYGDLSILSFHATKVF 182 + VH YG+PC V+AIQKIAD Y L+VIYDAAHAFGVQY S S+L +GDLS+LSFHATKVF Sbjct: 130 LAVHVYGHPCAVDAIQKIADNYNLRVIYDAAHAFGVQYHSGSLLNHGDLSVLSFHATKVF 189 Query: 183 NTFEGGAIICHNAEMKLRIDQLKNFGTVDEVTVVAAGINGKMSEVNAAMGLLQLQYMDEI 242 NTFEGGAI+ +A+ K RID LKNFG VDEVTVVA GINGKMSE NAA+GLLQL+ +D Sbjct: 190 NTFEGGAIVSPDAKTKQRIDHLKNFGFVDEVTVVAPGINGKMSEFNAALGLLQLKGIDAA 249 Query: 243 LTQRKAIDAQYRSLLSAVKHIDCLQPPEHTSAWNYSYFPILVRPGYPISRDALYTKMREQ 302 + QRK IDA+YR V+ I C H NY+YFPILV+PGYP+SRD LY K+RE Sbjct: 250 MQQRKVIDARYRKAFDNVQGIRCFS-AVHEDVANYAYFPILVQPGYPLSRDELYRKLREH 308 Query: 303 NIFPRRYFYPLISEFPMYRNLASSVPENLPVATEITQQILCLPIYPGLNIDHIRQVADII 362 NIF RRYFYPLIS+FPMYR L S+ NL VA++ +++LCLPIYPGL + + V +I Sbjct: 309 NIFARRYFYPLISDFPMYRGLPSAAQSNLRVASQAAKEVLCLPIYPGLTDEQLDSVIGLI 368 >B9CIL6.1 B9CIL6_9BURK DegT/DnrJ/EryC1/StrS aminotransferase Length = 380 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 1/360 (0%) Query: 3 VTQPFLPPLEEFVAYLQQIWANKHITNNGPFHQQLEAALADYLGVKYVCLFSNGTLALIT 62 VTQP LPPLE+F+ YLQ+IW ++ +TN GPFHQQ E AL +YLGV Y+ LF+NGTLAL+T Sbjct: 20 VTQPHLPPLEDFLPYLQKIWESRTLTNGGPFHQQFERALCEYLGVPYLSLFANGTLALVT 79 Query: 63 ALQALGITGEAITSPYSFVATSHALIWNGIKPVFADIDKDTLLLDPAKIEAAITEHTTAI 122 ALQAL I GE IT+PYSFVAT+H+L+WNGIKPVF D+ TL LDPA+IEAAIT TTAI Sbjct: 80 ALQALRINGEVITTPYSFVATAHSLLWNGIKPVFVDVTPGTLNLDPARIEAAITPQTTAI 139 Query: 123 VPVHCYGYPCKVEAIQKIADKYKLKVIYDAAHAFGVQYKSSSVLTYGDLSILSFHATKVF 182 +PVHCYG PC VEAIQKIAD Y L+VIYDAAHAFGV+ + SVLT+GDLS+LSFHATKVF Sbjct: 140 MPVHCYGNPCDVEAIQKIADNYNLRVIYDAAHAFGVRTDTGSVLTHGDLSVLSFHATKVF 199 Query: 183 NTFEGGAIICHNAEMKLRIDQLKNFGTVDEVTVVAAGINGKMSEVNAAMGLLQLQYMDEI 242 NTFEGGAIIC +A+ K RID LKNFG VDEVTVVA GINGKMSE+NAA G+LQLQ++D Sbjct: 200 NTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAPGINGKMSEINAAFGMLQLQHIDAA 259 Query: 243 LTQRKAIDAQYRSLLSAVKHIDCLQPPEHTSAWNYSYFPILVRPGYPISRDALYTKMREQ 302 L +R+ ID YR+LLS V+ I CL +H A NY+YF ILV YP+ RDALY K+R+ Sbjct: 260 LARRREIDTLYRTLLSDVRGIRCLPRGDHAVA-NYAYFAILVDEAYPLDRDALYRKLRDY 318 Query: 303 NIFPRRYFYPLISEFPMYRNLASSVPENLPVATEITQQILCLPIYPGLNIDHIRQVADII 362 +++ RRYF+PLISEFPMYR L S+ +NLPVA+E ++++LCLPIYP L + ++ D+I Sbjct: 319 DVYARRYFHPLISEFPMYRGLPSANRDNLPVASEASRKVLCLPIYPALTDAMVHRIVDLI 378 >B9C0C5.1 B9C0C5_9BURK DegT/DnrJ/EryC1/StrS aminotransferase Length = 380 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 239/360 (66%), Positives = 291/360 (80%), Gaps = 1/360 (0%) Query: 3 VTQPFLPPLEEFVAYLQQIWANKHITNNGPFHQQLEAALADYLGVKYVCLFSNGTLALIT 62 VTQP LPPLE+F+ YLQ+IW ++ +TN GPFHQQ E AL +YLGV Y+ LF+NGTLAL+T Sbjct: 20 VTQPHLPPLEDFLPYLQKIWESRTLTNGGPFHQQFERALCEYLGVPYLSLFANGTLALVT 79 Query: 63 ALQALGITGEAITSPYSFVATSHALIWNGIKPVFADIDKDTLLLDPAKIEAAITEHTTAI 122 ALQAL I GE IT+PYSFVAT+H+L+WNGIKPVF D+ TL LDPA+IEAAIT TTAI Sbjct: 80 ALQALRINGEVITTPYSFVATAHSLLWNGIKPVFVDVTPGTLNLDPARIEAAITPQTTAI 139 Query: 123 VPVHCYGYPCKVEAIQKIADKYKLKVIYDAAHAFGVQYKSSSVLTYGDLSILSFHATKVF 182 +PVHCYG PC VEAIQKIAD Y L+VIYDAAHAFGV+ + SVLT+GDLS+LSFHATKVF Sbjct: 140 MPVHCYGNPCDVEAIQKIADNYNLRVIYDAAHAFGVRTDTGSVLTHGDLSVLSFHATKVF 199 Query: 183 NTFEGGAIICHNAEMKLRIDQLKNFGTVDEVTVVAAGINGKMSEVNAAMGLLQLQYMDEI 242 NTFEGGAIIC +A+ K RID LKNFG VDEVTVVA GINGKMSE+NAA G+LQLQ++D Sbjct: 200 NTFEGGAIICPDAKTKQRIDHLKNFGFVDEVTVVAPGINGKMSEINAAFGMLQLQHIDAA 259 Query: 243 LTQRKAIDAQYRSLLSAVKHIDCLQPPEHTSAWNYSYFPILVRPGYPISRDALYTKMREQ 302 L +R+ ID YR+LLS V+ I CL +H A NY+YF ILV YP+ RDALY K+R+ Sbjct: 260 LARRREIDTLYRTLLSDVRGIRCLPRGDHAVA-NYAYFAILVDEAYPLDRDALYRKLRDY 318 Query: 303 NIFPRRYFYPLISEFPMYRNLASSVPENLPVATEITQQILCLPIYPGLNIDHIRQVADII 362 +++ RRYF+PLISEFPMYR L S+ +NLPVA+E ++++LCLPIYP L + ++ D+I Sbjct: 319 DVYARRYFHPLISEFPMYRGLPSANRDNLPVASEASRKVLCLPIYPALTDAMVHRIVDLI 378 >B3PVC4.1 B3PVC4_RHIE6 Putative nucleotide sugar transaminase protein Length = 369 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 239/362 (66%), Positives = 291/362 (80%), Gaps = 1/362 (0%) Query: 3 VTQPFLPPLEEFVAYLQQIWANKHITNNGPFHQQLEAALADYLGVKYVCLFSNGTLALIT 62 VT+P LPPLEEF+ L+ IW N+ +TN GPFH+QLE L ++LGVK++ LFSN T+AL+T Sbjct: 8 VTKPSLPPLEEFIPSLEAIWNNRILTNGGPFHEQLEQELCNHLGVKHISLFSNATVALLT 67 Query: 63 ALQALGITGEAITSPYSFVATSHALIWNGIKPVFADIDKDTLLLDPAKIEAAITEHTTAI 122 ALQAL +TGE IT+PYSFVATSH+L+WNG+KPVF DID TL LDPAKIEAAIT+ TTAI Sbjct: 68 ALQALRVTGEVITTPYSFVATSHSLLWNGLKPVFVDIDPVTLNLDPAKIEAAITQQTTAI 127 Query: 123 VPVHCYGYPCKVEAIQKIADKYKLKVIYDAAHAFGVQYKSSSVLTYGDLSILSFHATKVF 182 +PVHCYG+PC V++IQKIAD Y LKVIYDAAHAFGV+ + S+L +GDLSILSFHATKVF Sbjct: 128 MPVHCYGHPCDVDSIQKIADLYNLKVIYDAAHAFGVEDERGSILNHGDLSILSFHATKVF 187 Query: 183 NTFEGGAIICHNAEMKLRIDQLKNFGTVDEVTVVAAGINGKMSEVNAAMGLLQLQYMDEI 242 NTFEGGAIIC + + K RIDQLKNFG VDEVTVVA G NGKMSE NAA+GLLQL+Y++ Sbjct: 188 NTFEGGAIICPDVKTKTRIDQLKNFGYVDEVTVVAPGTNGKMSEFNAALGLLQLKYINFA 247 Query: 243 LTQRKAIDAQYRSLLSAVKHIDCLQPPEHTSAWNYSYFPILVRPGYPISRDALYTKMREQ 302 L +R IDA YR L V I+CL T + N+SYFPILVRP YPISRDALY ++E Sbjct: 248 LERRGLIDAAYRERLRGVAGIECLNRSGETVS-NFSYFPILVRPDYPISRDALYEILKEN 306 Query: 303 NIFPRRYFYPLISEFPMYRNLASSVPENLPVATEITQQILCLPIYPGLNIDHIRQVADII 362 NI PRRYFYPLIS F MYR+L S+ P NLP+A++ QQ+LCLPIYP + ++ + ++ +I Sbjct: 307 NIHPRRYFYPLISSFSMYRSLPSAQPANLPIASDAAQQVLCLPIYPDMEMEIVEKICALI 366 Query: 363 QS 364 +S Sbjct: 367 ES 368