BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0042.p (436 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IVQ4.1 D8IVQ4_HERSS Periplasmic trypsin-like serine endoprotea... 695 0.0 Q46PM8.1 Q46PM8_CUPPJ Peptidase S1C, Do 590 e-166 B2AHX0.1 B2AHX0_CUPTR PERIPLASMIC PROTEASE; contains two PDZ dom... 585 e-165 Q1LH84.1 Q1LH84_RALME Multifunctional enzyme (Serine-type endope... 581 e-164 Q8XPT5.1 Q8XPT5_RALSO Probable protease signal peptide protein E... 580 e-163 >D8IVQ4.1 D8IVQ4_HERSS Periplasmic trypsin-like serine endoprotease protein Length = 494 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/433 (80%), Positives = 395/433 (91%), Gaps = 2/433 (0%) Query: 5 TDFSGIVERAGPAVVNISVTGKAKRVSDDASDDVDPNDPFSEFFKRFGPQFQQPPRTPQI 64 TDFSGIV+R GPAVVNISVTGKA++V+DD + +DPNDPFSEFFKRFGPQ Q P + P+I Sbjct: 63 TDFSGIVQRYGPAVVNISVTGKARKVADDDDNGLDPNDPFSEFFKRFGPQLQMP-QQPRI 121 Query: 65 MRGLGSGFIISPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGADKQSDIAVIRIAAK 124 M GLGSGFIISPDGLILTNAHVVDGAQEV VKLTDRREFKAKVLG DKQSDIAVIRI AK Sbjct: 122 MHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDAK 181 Query: 125 DLPTVQIGNPALMKVGEPVLAIGSPYGFDNTATAGIVSAKSRALPDDNYVPFIQTDVAVN 184 +LPTVQIG+P+ +KVG+PVLAIGSPYGFDNTATAGI+SAKSR+LPDDNYVPFIQTDVAVN Sbjct: 182 NLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAVN 241 Query: 185 PGNSGGPLFNLKGQVVGINSQIYSQTGGYQGLSFSIPIDVAMKVEQQLVQHGKVTRGRLG 244 PGNSGGPLF+L GQV+GINSQIYSQTGG+QGLSFSIPIDVAMKVEQQLV HGKVTRGRLG Sbjct: 242 PGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRLG 301 Query: 245 VSVQEINQALAESFGLKKSEGALVSSVEKGSPAEKAGVQAGDVILRFNGQAIDHSVDLPT 304 VSVQ++NQAL++SFGLKK+EGALVSSVEKGSPA+KAG+QAGDVI+ FNG AIDHSVDLPT Sbjct: 302 VSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLPT 361 Query: 305 LVADTAPGTTQKIEVMRNGALKSLNITVGELKPTK-EAAASRNEPQGRLGLAVRPLDKSE 363 LVADT PG+T+ +EVMR G ++++N+TVGE+K K +A AS+++ QGRLGLAVRPLDK E Sbjct: 362 LVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKDE 421 Query: 364 QQQIGVHGGLLVEDVNGPAAVAGIQSGDVILSLNGNAVTSVEQLRSLVSKAGKSVALLVE 423 Q Q+G GLLVEDV+GPAAVAGIQSGDVIL++NG V+SV QLR L + AGK+VALLVE Sbjct: 422 QAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLVE 481 Query: 424 RGDDKIFVPVYLN 436 RGD+KIFVP+ LN Sbjct: 482 RGDEKIFVPLALN 494 >Q46PM8.1 Q46PM8_CUPPJ Peptidase S1C, Do Length = 488 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 302/436 (69%), Positives = 360/436 (82%), Gaps = 5/436 (1%) Query: 3 TPTDFSGIVERAGPAVVNISVTGKAKRVSDDASDDVDPNDPFSEFFKRFGPQFQQPPRTP 62 TP DFSGIV++ GPAVVNISVT +A+R + A +DP+DP +FFKRFGPQFQ P Sbjct: 54 TPMDFSGIVDQYGPAVVNISVTARAQRTAMQAPSGMDPDDPLFQFFKRFGPQFQGPQSGQ 113 Query: 63 QIMRGLGSGFIISPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGADKQSDIAVIRIA 122 Q+++GLGSGFI+SPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLG D Q+D+AVIRI Sbjct: 114 QLVKGLGSGFIVSPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGTDPQTDVAVIRID 173 Query: 123 AKDLPTVQIGNPALMKVGEPVLAIGSPYGFDNTATAGIVSAKSRALPDDNYVPFIQTDVA 182 AKDLPTV++G+PA +KVGEPVLAIGSPYGF+NT TAGIVSAKSR+LPDD YVPFIQTDVA Sbjct: 174 AKDLPTVRLGDPARVKVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVA 233 Query: 183 VNPGNSGGPLFNLKGQVVGINSQIYSQTGGYQGLSFSIPIDVAMKVEQQLVQHGKVTRGR 242 VNPGNSGGPLFN +G+V+GINSQIYSQTGGYQGLSF+IPI+VA KVEQQLV HGKVTRGR Sbjct: 234 VNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAIPINVATKVEQQLVAHGKVTRGR 293 Query: 243 LGVSVQEINQALAESFGLKKSEGALVSSVEKGSPAEKAGVQAGDVILRFNGQAIDHSVDL 302 LG+SVQE+NQALA+SFGL K GALV+SVE SPA KAGV+ GDVI++ + IDHS DL Sbjct: 294 LGISVQEVNQALAQSFGLPKPSGALVNSVEADSPAAKAGVKPGDVIVQLDDDVIDHSGDL 353 Query: 303 PTLVADTAPGTTQKIEVMRNGALKSLNITVGELKPTKEAAASR-NEPQ--GRLGLAVRPL 359 P VAD PGT ++++R G +L + VG K +E+ A + N+ Q GRLGLAVR L Sbjct: 354 PEHVADIKPGTQTTLKIIRKGQPMTLAVKVGAAK--EESVAQKGNDSQAGGRLGLAVRSL 411 Query: 360 DKSEQQQIGVHGGLLVEDVNGPAAVAGIQSGDVILSLNGNAVTSVEQLRSLVSKAGKSVA 419 SE+++ G+ GGL+VEDV GPAA GIQ GDVILSLNG +TS +QLR+LV+K+GK VA Sbjct: 412 TPSERRESGIDGGLVVEDVAGPAARVGIQPGDVILSLNGTPITSADQLRALVAKSGKQVA 471 Query: 420 LLVERGDDKIFVPVYL 435 LLV+R + +IF+P+ L Sbjct: 472 LLVQRDEARIFIPLDL 487 >B2AHX0.1 B2AHX0_CUPTR PERIPLASMIC PROTEASE; contains two PDZ domain EC=3.4.21.- Length = 511 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 297/434 (68%), Positives = 353/434 (81%), Gaps = 2/434 (0%) Query: 4 PTDFSGIVERAGPAVVNISVTGKAKRVSDDASDDVDPNDPFSEFFKRFGPQFQQPPR-TP 62 P DFSGIV + GPAVVNISVT +A+R + +DP+DP +FFKRFGPQFQ P Sbjct: 77 PMDFSGIVAQYGPAVVNISVTARAQRTAVQMPPGIDPDDPLFQFFKRFGPQFQGPQGGAQ 136 Query: 63 QIMRGLGSGFIISPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGADKQSDIAVIRIA 122 Q++RG GSGFI+SPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLG D Q+D+AVIRI Sbjct: 137 QLVRGQGSGFIVSPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGTDPQTDVAVIRID 196 Query: 123 AKDLPTVQIGNPALMKVGEPVLAIGSPYGFDNTATAGIVSAKSRALPDDNYVPFIQTDVA 182 A+DLPTV++G+P+ ++VGEPVLAIGSPYGF+NT TAGIVSAKSR+LPDD YVPFIQTDVA Sbjct: 197 ARDLPTVRLGDPSQVRVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVA 256 Query: 183 VNPGNSGGPLFNLKGQVVGINSQIYSQTGGYQGLSFSIPIDVAMKVEQQLVQHGKVTRGR 242 VNPGNSGGPLFN +G+VVGINSQIYSQTGGYQGLSF+IPIDVA KV+QQLV HGKVTRGR Sbjct: 257 VNPGNSGGPLFNQRGEVVGINSQIYSQTGGYQGLSFAIPIDVATKVQQQLVAHGKVTRGR 316 Query: 243 LGVSVQEINQALAESFGLKKSEGALVSSVEKGSPAEKAGVQAGDVILRFNGQAIDHSVDL 302 LG+SVQE+NQALA+SFGL K GALV+SVE SPA +AG++ GDVI++ N IDHS DL Sbjct: 317 LGISVQEVNQALAQSFGLPKPTGALVNSVEPDSPAARAGLKPGDVIVQLNNDVIDHSGDL 376 Query: 303 PTLVADTAPGTTQKIEVMRNGALKSLNITVGELKPTKEA-AASRNEPQGRLGLAVRPLDK 361 P VAD PGT ++++R G +L++TVG + A A E GRLGLAVRPL Sbjct: 377 PEHVADIKPGTQSSLKIIRKGQPMTLSVTVGSARDQAVAQKAGGKEANGRLGLAVRPLSP 436 Query: 362 SEQQQIGVHGGLLVEDVNGPAAVAGIQSGDVILSLNGNAVTSVEQLRSLVSKAGKSVALL 421 +E+++ G+ GGL+VEDV GPAA GIQ GDVILSLNG + SV+QLR+LV K+GK VALL Sbjct: 437 AEKRESGIEGGLVVEDVTGPAARVGIQPGDVILSLNGTPIASVDQLRTLVGKSGKQVALL 496 Query: 422 VERGDDKIFVPVYL 435 V+R D +IF+P+ L Sbjct: 497 VQRDDARIFIPLDL 510 >Q1LH84.1 Q1LH84_RALME Multifunctional enzyme (Serine-type endopeptidase / oxidoreductase) (DegP / mucD-like) EC=1.3.1.74 EC=3.4.21.- Length = 487 Score = 581 bits (1498), Expect = e-164, Method: Compositional matrix adjust. Identities = 300/439 (68%), Positives = 356/439 (81%), Gaps = 6/439 (1%) Query: 1 LATPTDFSGIVERAGPAVVNISVTGKAKRVSDDASDDVDPNDPFSEFFKRFGPQFQQPPR 60 +ATPTDFS IV++ GPAVVNISVT +A+R S VDP+DP +FFKRFGPQFQ P Sbjct: 50 VATPTDFSSIVDQYGPAVVNISVTARAQRTSAQVPQGVDPDDPLFQFFKRFGPQFQGPQN 109 Query: 61 T-PQIMRGLGSGFIISPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGADKQSDIAVI 119 PQ++RGLGSGFI+S DGLILTNAHVVD A EVTVKLTDRREFKAKVLG+D Q+DIAVI Sbjct: 110 AQPQLVRGLGSGFIVSQDGLILTNAHVVDNATEVTVKLTDRREFKAKVLGSDPQTDIAVI 169 Query: 120 RIAAKDLPTVQIGNPALMKVGEPVLAIGSPYGFDNTATAGIVSAKSRALPDDNYVPFIQT 179 RI AK+LPTV++G+P+ +VGEPVLAIGSPYGF+NT TAGIVSAKSR+LPDD YVPFIQT Sbjct: 170 RIDAKNLPTVRLGDPSKTRVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQT 229 Query: 180 DVAVNPGNSGGPLFNLKGQVVGINSQIYSQTGGYQGLSFSIPIDVAMKVEQQLVQHGKVT 239 DVAVNPGNSGGPLFN +G+V+GINSQIYSQTGGYQGLSF+IPI+VA KVE+QLV HGKVT Sbjct: 230 DVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAIPINVATKVEEQLVAHGKVT 289 Query: 240 RGRLGVSVQEINQALAESFGLKKSEGALVSSVEKGSPAEKAGVQAGDVILRFNGQAIDHS 299 RGRLG+SVQE+NQALA+SF L K GALV+SVE SPA K GV+AGDVI++ IDHS Sbjct: 290 RGRLGISVQEVNQALAQSFNLPKPAGALVNSVEPDSPAAKGGVKAGDVIVQLGDDVIDHS 349 Query: 300 VDLPTLVADTAPGTTQKIEVMRNGALKSLNITVGELKPTKEAAASR---NEPQGRLGLAV 356 DLP VAD PGT K++V+R G +L + VG +K ++A A + + GRLGLAV Sbjct: 350 GDLPEHVADLKPGTETKLKVIRKGQPMTLTVQVGAVK--EDALAQKGNGGQDGGRLGLAV 407 Query: 357 RPLDKSEQQQIGVHGGLLVEDVNGPAAVAGIQSGDVILSLNGNAVTSVEQLRSLVSKAGK 416 R L +E++ G+ GGL+VEDV GPAA GIQ GDVILSLNG ++S EQLR+LVSK+GK Sbjct: 408 RQLTPAEKRDSGIDGGLVVEDVTGPAARVGIQPGDVILSLNGTPISSAEQLRTLVSKSGK 467 Query: 417 SVALLVERGDDKIFVPVYL 435 VALLV+R D +IF+P+ L Sbjct: 468 QVALLVQRDDARIFIPLDL 486 >Q8XPT5.1 Q8XPT5_RALSO Probable protease signal peptide protein EC=3.4.-.- Length = 490 Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust. Identities = 301/437 (68%), Positives = 357/437 (81%), Gaps = 3/437 (0%) Query: 1 LATPTDFSGIVERAGPAVVNISVTGKAKRVS-DDASDDVDPNDPFSEFFKRFGPQFQQPP 59 +A P DFS IVER GPAVVNIS T +A+R S V P+DPF+EFF+RF PQ Q Sbjct: 54 VAVPMDFSAIVERYGPAVVNISTTARAQRTSIQGLPPGVSPDDPFAEFFRRFMPQAPQQ- 112 Query: 60 RTPQIMRGLGSGFIISPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGADKQSDIAVI 119 + Q+++GLGSGFI+SPDGLILTNAHVVDGAQEV+VKLTDRREFKAKVLG DKQSD+AV+ Sbjct: 113 QGDQVVKGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRREFKAKVLGVDKQSDVAVL 172 Query: 120 RIAAKDLPTVQIGNPALMKVGEPVLAIGSPYGFDNTATAGIVSAKSRALPDDNYVPFIQT 179 RIAA +LPTVQIG+PA KVGEPVLAIGSPYGF+NT TAGIVSAKSR+LPDD YVPFIQT Sbjct: 173 RIAASNLPTVQIGSPAGTKVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQT 232 Query: 180 DVAVNPGNSGGPLFNLKGQVVGINSQIYSQTGGYQGLSFSIPIDVAMKVEQQLVQHGKVT 239 DVAVNPGNSGGPLFN +G+V+GINSQIYSQTGGYQGLSF++PIDVAMKVEQQLV GKVT Sbjct: 233 DVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMKVEQQLVATGKVT 292 Query: 240 RGRLGVSVQEINQALAESFGLKKSEGALVSSVEKGSPAEKAGVQAGDVILRFNGQAIDHS 299 RGRLG+SVQE++Q+LA+SF L K EGALV++VEK PA KAG+Q GDVIL+ I HS Sbjct: 293 RGRLGISVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDVILQIGDVHIGHS 352 Query: 300 VDLPTLVADTAPGTTQKIEVMRNGALKSLNITVGELKPTKEAAASRNEP-QGRLGLAVRP 358 DLP VA+ PG+T ++++R+G +L++TVGE K K AA + P +GRLGLAVRP Sbjct: 353 GDLPEQVAEIKPGSTVPLQIIRHGKPTALSVTVGEAKDAKVAANTSAAPDKGRLGLAVRP 412 Query: 359 LDKSEQQQIGVHGGLLVEDVNGPAAVAGIQSGDVILSLNGNAVTSVEQLRSLVSKAGKSV 418 L E++Q G+ GGL+V D +GPAA AGIQ GDVILSLNG V+S ++LR+LV +AGK V Sbjct: 413 LQAEEKRQSGLPGGLVVMDSSGPAAKAGIQPGDVILSLNGTPVSSAQELRALVDRAGKHV 472 Query: 419 ALLVERGDDKIFVPVYL 435 ALLV+R D KIFVP+ L Sbjct: 473 ALLVQRDDAKIFVPLDL 489