BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0040.p (410 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q397U9.1 Q397U9_BURS3 Citrate synthase EC=2.3.3.1 283 3e-74 D8INW5.1 D8INW5_HERSS Citrate synthase protein EC=2.3.3.1 280 3e-73 F0Q9U5.1 F0Q9U5_ACIAP Citrate synthase 277 2e-72 A9BMJ2.1 A9BMJ2_DELAS Citrate synthase 263 3e-68 B2UH00.1 B2UH00_RALPJ DNA binding domain protein, excisionase fa... 242 7e-62 >Q397U9.1 Q397U9_BURS3 Citrate synthase EC=2.3.3.1 Length = 429 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 144/219 (65%), Positives = 166/219 (75%), Gaps = 3/219 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A+G G L+R+LAA LL TR APIHEQCA+AW + GA L+RMALVLCADHELNASSF Sbjct: 171 AQGCGDLVRILAACLLRTRIDTAPIHEQCARAWGVGPAGAELIRMALVLCADHELNASSF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 T RC+AST SLRA V+ GLA L+G +HG ATAR EAL DE+ G D+ + RLAR Sbjct: 231 TGRCIASTNASLRAVVVGGLAGLSGERHGAATARGEALWDEL---GNKDVEQKMGERLAR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 GD LPGFGH LYPDGDVRA LL+ +LP HP W+ +I A L+GQ PSLD ALVALRRH Sbjct: 288 GDGLPGFGHALYPDGDVRATYLLSRILPRHPQWKRMIDAGSALVGQKPSLDLALVALRRH 347 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXAL 328 L+LPVGAAFGLFALGR +GWIA LEQR +LIRP A+ Sbjct: 348 LRLPVGAAFGLFALGRSIGWIAHGLEQREQSDLIRPRAV 386 >D8INW5.1 D8INW5_HERSS Citrate synthase protein EC=2.3.3.1 Length = 431 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/219 (65%), Positives = 167/219 (76%), Gaps = 3/219 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A+G G L+R+LAA LL TRP +PIH QCA+AW + G L+RMALVLCADHELNASSF Sbjct: 171 AQGCGDLVRILAACLLRTRPDTSPIHVQCARAWGVGRAGGELIRMALVLCADHELNASSF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 T+RCVAST SLRA VIAGLA L+GG+HG T RVEAL DE+ G D+ ++ RL+R Sbjct: 231 TSRCVASTDASLRAVVIAGLAGLSGGRHGATTGRVEALWDEL---GTRDVDRKMRERLSR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 GDDLPGFGH LYPDGD RA+ LL+++LP H W +I A L GQ PS+DFALVALRRH Sbjct: 288 GDDLPGFGHTLYPDGDPRASYLLSQILPRHSPWAAMIDAGITLTGQKPSVDFALVALRRH 347 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXAL 328 L+LPVGAAFGLFALGR +GWIA LEQR LIRP A+ Sbjct: 348 LRLPVGAAFGLFALGRSIGWIAHGLEQREQHHLIRPRAV 386 >F0Q9U5.1 F0Q9U5_ACIAP Citrate synthase Length = 428 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/219 (65%), Positives = 165/219 (75%), Gaps = 3/219 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A+G G L+R+LAA LL TRP PIHEQCA+AW LD GA L+R ALVL ADHELNAS+F Sbjct: 171 AQGCGDLVRILAACLLRTRPDTRPIHEQCARAWGLDPAGAELIRKALVLGADHELNASTF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 T RCVAST SLRA VI GLA L+GG+HG TARVEAL DE+ G DI ++ RL+R Sbjct: 231 TGRCVASTDASLRAVVIGGLAGLSGGRHGATTARVEALWDEL---GTRDIERRMRDRLSR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 GDDLPGFGH LYPDGD RA LLA ++P HP W +I A L+GQ PS+D ALVALRRH Sbjct: 288 GDDLPGFGHSLYPDGDARAAYLLARLMPRHPPWARMIDAGTALVGQKPSMDLALVALRRH 347 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXAL 328 L+LP+GAAFGLFALGR +GWIA LEQR LIRP A+ Sbjct: 348 LRLPMGAAFGLFALGRSIGWIAHGLEQRGQPGLIRPRAV 386 >A9BMJ2.1 A9BMJ2_DELAS Citrate synthase Length = 397 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 153/218 (70%), Positives = 172/218 (78%), Gaps = 4/218 (1%) Query: 110 AEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCADHELNASSF 169 A G GAL+RLLAA LLGT P APIH QCA+AW LD GA LVRMALVLCADHELNAS F Sbjct: 171 AAGCGALLRLLAACLLGTAPDKAPIHLQCAQAWALDTQGADLVRMALVLCADHELNASGF 230 Query: 170 TARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAAGLQRRLAR 229 TARCVASTG SLRA+V+ GLAALTGG+HGG TARVEAL DE+ G+A A L++RLAR Sbjct: 231 TARCVASTGASLRAAVVGGLAALTGGRHGGTTARVEALWDEL---GEAQAPARLRQRLAR 287 Query: 230 GDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRDIIAAARNLIGQHPSLDFALVALRRH 289 G+ LPGFGHHLYP+GDVRA ALL E+LP + A L G PS+DFALVALRRH Sbjct: 288 GETLPGFGHHLYPEGDVRA-ALLLEMLPRQGPAAALAAEVMALTGLAPSVDFALVALRRH 346 Query: 290 LQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXA 327 LQLP G+AFGLFALGR GW+AQALEQRA+ ++IRP A Sbjct: 347 LQLPTGSAFGLFALGRCAGWLAQALEQRATRQIIRPRA 384 >B2UH00.1 B2UH00_RALPJ DNA binding domain protein, excisionase family Length = 410 Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 139/230 (60%), Positives = 163/230 (70%), Gaps = 10/230 (4%) Query: 102 DQARLVGAAEGSGALMRLLAASLLGTRPSPAPIHEQCAKAWKLDAHGAALVRMALVLCAD 161 D AR A +GAL+R++ A++LG +P AP+H QC +AW LDAH A +R+ALVLCAD Sbjct: 166 DSAR---TARDAGALLRVVFAAMLGRKPDTAPVHLQCQQAWNLDAHAAEAIRVALVLCAD 222 Query: 162 HELNASSFTARCVASTGTSLRASVIAGLAALTGGKHGGATARVEALLDEIDANGKADIAA 221 HELNASSF AR VASTG SL A V AGLAAL+GG+HGG TARVEALL E++ GK +A Sbjct: 223 HELNASSFAARVVASTGASLGAVVSAGLAALSGGRHGGTTARVEALLSELE--GKRSVAT 280 Query: 222 GLQRRLARGDDLPGFGHHLYPDGDVRANALLAEVLPHHPAWRD----IIAAARNLIGQHP 277 L+RRL RGD LPGFGH LY D RA A+LA LP A R ++ A L G P Sbjct: 281 ALRRRLDRGDTLPGFGHPLYRHADPRAEAILAH-LPKTGAVRKRLQTVMDAVAGLTGDGP 339 Query: 278 SLDFALVALRRHLQLPVGAAFGLFALGRGMGWIAQALEQRASGELIRPXA 327 S+DFALVA RR L LP G+ FGLFA GR GWIA ALEQRA+G+LIRP A Sbjct: 340 SVDFALVATRRVLGLPAGSGFGLFAAGRTAGWIAHALEQRAAGQLIRPRA 389