BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0038.p         (128 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

E3HKU7.1 E3HKU7_ACHXA Copper resistance protein C                     163   9e-39
A9BPX2.1 A9BPX2_DELAS Copper resistance protein CopC                  163   9e-39
E2EKI0.1 E2EKI0_9BURK CopC                                            163   9e-39
Q58AD8.1 Q58AD8_RALME Copper resistance C signal peptide protein      161   2e-38
Q1LA53.1 Q1LA53_RALME CopC Copper resistance protein, ''E set do...   161   3e-38

>E3HKU7.1 E3HKU7_ACHXA Copper resistance protein C
          Length = 128

 Score =  163 bits (412), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 92/128 (71%)

Query: 1   MSYQFFIAKTAGAIAAAAFATAAFAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSG 60
           M+   FIAK    IAA  FATAAFAHP L+ STP D S VSAP  IEL+FSE L  QFS 
Sbjct: 1   MTRSHFIAKLVAPIAAGLFATAAFAHPSLVSSTPADKSQVSAPATIELKFSETLVPQFSA 60

Query: 61  ASLMMTSMPGMNHAAPMKVGAKISGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPIT 120
           ASL+MT MPGM    PMK+ A ++GA D KTM+ITP Q L PG Y ++WRAVSSDTHPIT
Sbjct: 61  ASLVMTGMPGMASHGPMKINASVAGAGDGKTMVITPAQALQPGDYRVEWRAVSSDTHPIT 120

Query: 121 GKVTFAVK 128
           G VTF VK
Sbjct: 121 GNVTFKVK 128


>A9BPX2.1 A9BPX2_DELAS Copper resistance protein CopC
          Length = 128

 Score =  163 bits (412), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 92/128 (71%)

Query: 1   MSYQFFIAKTAGAIAAAAFATAAFAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSG 60
           M+   FIAK    IAA  FATAAFAHP L+ STP D S VSAP  IEL+FSE L  QFS 
Sbjct: 1   MTRSHFIAKLVAPIAAGLFATAAFAHPSLVSSTPADKSQVSAPATIELKFSETLVPQFSA 60

Query: 61  ASLMMTSMPGMNHAAPMKVGAKISGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPIT 120
           ASL+MT MPGM    PMK+ A ++GA D KTM+ITP Q L PG Y ++WRAVSSDTHPIT
Sbjct: 61  ASLVMTGMPGMASHGPMKINASVAGAGDGKTMVITPAQALQPGDYRVEWRAVSSDTHPIT 120

Query: 121 GKVTFAVK 128
           G VTF VK
Sbjct: 121 GNVTFKVK 128


>E2EKI0.1 E2EKI0_9BURK CopC
          Length = 128

 Score =  163 bits (412), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 82/128 (64%), Positives = 92/128 (71%)

Query: 1   MSYQFFIAKTAGAIAAAAFATAAFAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSG 60
           M+   FIAK    IAA  FATAAFAHP L+ STP D S VSAP  IEL+FSE L  QFS 
Sbjct: 1   MTRSHFIAKLVAPIAAGLFATAAFAHPSLVSSTPADKSQVSAPATIELKFSETLVPQFSA 60

Query: 61  ASLMMTSMPGMNHAAPMKVGAKISGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPIT 120
           ASL+MT MPGM    PMK+ A ++GA D KTM+ITP Q L PG Y ++WRAVSSDTHPIT
Sbjct: 61  ASLVMTGMPGMASHGPMKINASVAGAGDGKTMVITPAQALQPGDYRVEWRAVSSDTHPIT 120

Query: 121 GKVTFAVK 128
           G VTF VK
Sbjct: 121 GNVTFKVK 128


>Q58AD8.1 Q58AD8_RALME Copper resistance C signal peptide protein
          Length = 128

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/105 (67%), Positives = 88/105 (83%)

Query: 24  FAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSGASLMMTSMPGMNHAAPMKVGAKI 83
           FAHP+LL STP D + V+AP+KIEL+FSENLS QFSGA+L+MT MPGM   +PMK+ AK+
Sbjct: 24  FAHPKLLTSTPADKAEVAAPQKIELKFSENLSTQFSGANLLMTGMPGMADHSPMKIAAKV 83

Query: 84  SGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPITGKVTFAVK 128
           +G +DPKTM++TPTQPL PG Y ++WRAVSSDTHPI G +TF VK
Sbjct: 84  AGGDDPKTMVVTPTQPLSPGNYRVEWRAVSSDTHPINGNITFTVK 128


>Q1LA53.1 Q1LA53_RALME CopC Copper resistance protein, ''E set domains''
           superfamily CopC Cu(II) binding protein
          Length = 132

 Score =  161 bits (407), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 71/105 (67%), Positives = 88/105 (83%)

Query: 24  FAHPRLLGSTPEDNSTVSAPEKIELRFSENLSKQFSGASLMMTSMPGMNHAAPMKVGAKI 83
           FAHP+LL STP D + V+AP+KIEL+FSENLS QFSGA+L+MT MPGM   +PMK+ AK+
Sbjct: 28  FAHPKLLTSTPADKAEVAAPQKIELKFSENLSTQFSGANLLMTGMPGMADHSPMKIAAKV 87

Query: 84  SGAEDPKTMIITPTQPLMPGVYSIDWRAVSSDTHPITGKVTFAVK 128
           +G +DPKTM++TPTQPL PG Y ++WRAVSSDTHPI G +TF VK
Sbjct: 88  AGGDDPKTMVVTPTQPLSPGNYRVEWRAVSSDTHPINGNITFTVK 132