BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0023.p         (60 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IVP6.1 D8IVP6_HERSS Cytochrome c family protein                      79   2e-13
A4GAB4.1 A4GAB4_HERAR Putative cytochrome c                            77   6e-13
A6T414.1 A6T414_JANMA Cytochrome c family protein                      75   5e-12
Q0K5Q0.1 Q0K5Q0_CUPNH Cytochrome c555                                  69   2e-10
F1W1A5.1 F1W1A5_9BURK Putative cytochrome c5                           69   2e-10

>D8IVP6.1 D8IVP6_HERSS Cytochrome c family protein
          Length = 189

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/51 (78%), Positives = 44/51 (86%), Gaps = 1/51 (1%)

Query: 1  MSDAHNEHHESAIKTPKQLIAAVSAGFLIPIVCIVLLVEYVTNGQTTGAGS 51
          M  A +EH ESAIKTPKQLIAAV AGF++PIVCIVLLV+YVTNG  TGAGS
Sbjct: 1  MRSAQHEH-ESAIKTPKQLIAAVVAGFMVPIVCIVLLVQYVTNGPKTGAGS 50


>A4GAB4.1 A4GAB4_HERAR Putative cytochrome c
          Length = 181

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 43/51 (84%), Gaps = 2/51 (3%)

Query: 1  MSDAHNEHHESAIKTPKQLIAAVSAGFLIPIVCIVLLVEYVTNGQTTGAGS 51
          MSDAH  H ESAIKTPKQLI A+ AGFL+PI+CIVLLV YVTN +T GAGS
Sbjct: 1  MSDAH--HEESAIKTPKQLIMAILAGFLVPIICIVLLVLYVTNDKTIGAGS 49


>A6T414.1 A6T414_JANMA Cytochrome c family protein
          Length = 187

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 43/51 (84%), Gaps = 1/51 (1%)

Query: 1  MSDAHNEHHESAIKTPKQLIAAVSAGFLIPIVCIVLLVEYVTNGQTTGAGS 51
          MSDAH+E  ESAIKTPKQLI A+ AGFL+PIVCIVLLV YVTN +  GAGS
Sbjct: 1  MSDAHHEE-ESAIKTPKQLIMAILAGFLVPIVCIVLLVLYVTNEKHIGAGS 50


>Q0K5Q0.1 Q0K5Q0_CUPNH Cytochrome c555
          Length = 297

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 2/54 (3%)

Query: 1  MSDAHNEH--HESAIKTPKQLIAAVSAGFLIPIVCIVLLVEYVTNGQTTGAGSA 52
          MSD HNEH  HES IKTPKQLIA V A FL+PI+ I+LLV +V +G T  AG+A
Sbjct: 1  MSDVHNEHDEHESPIKTPKQLIAVVIAAFLVPIIVIILLVNFVGHGSTESAGAA 54


>F1W1A5.1 F1W1A5_9BURK Putative cytochrome c5
          Length = 289

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 1/51 (1%)

Query: 1  MSDAHNEHHESAIKTPKQLIAAVSAGFLIPIVCIVLLVEYVTNGQTTGAGS 51
          MSD H++H  S IKTPKQLIAAV AGF++PI+ IVLLV+YV+N    G GS
Sbjct: 1  MSDTHDDH-SSGIKTPKQLIAAVVAGFIVPIIGIVLLVQYVSNADKVGDGS 50