BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0088.p (269 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0Z3.1 D8J0Z3_HERSS 2-keto-3-deoxygalactonate kinase protein E... 301 8e-80 Q6J672.1 Q6J672_9BURK 2-keto-3-deoxy-galactonokinase 283 2e-74 Q21ZV9.1 Q21ZV9_RHOFD 2-keto-3-deoxygalactonate kinase EC=2.7.1.58 283 3e-74 D4X3H8.1 D4X3H8_9BURK 2-dehydro-3-deoxygalactonate kinase EC=2.7... 281 5e-74 E5U507.1 E5U507_ALCXX 2-keto-3-deoxy-galactonokinase 281 7e-74 >D8J0Z3.1 D8J0Z3_HERSS 2-keto-3-deoxygalactonate kinase protein EC=2.7.1.58 Length = 319 Score = 301 bits (770), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 159/246 (64%), Positives = 182/246 (73%), Gaps = 11/246 (4%) Query: 13 LIALDWGTTSLRAYRFDADGRVADRRALPWGVMNLPPAEDGAGASANSANSADAGFRRAL 72 LIALDWGT+SLR YR+D G+V +RRA PWG+MNLP E G + A A +R AL Sbjct: 10 LIALDWGTSSLRCYRYDGSGQVVERRAHPWGIMNLPAVEHG--------DDAQAPYRAAL 61 Query: 73 QAACGDWLRDSPATPLIAAGMVGSKQGWREAPYLDVPLAVSEVGNTMTIVDTGFGVPLHI 132 +AACGDW+ +P LIAAGMVGSKQGWREA YL VPLA +G +T VDTG G L I Sbjct: 62 EAACGDWIAAAPEAALIAAGMVGSKQGWREAAYLTVPLAPDGIGRKLTEVDTGLGRSLWI 121 Query: 133 VPGLLQRSALPNVMRGEETQVAGILDQLQVDDILIGLPGTHSKWVHVRGKRIEHFDTFMT 192 +PGLLQ SALPNVMRGEETQV G L Q + ++LIGLPGTHSKWV V RIEHFDTFMT Sbjct: 122 IPGLLQNSALPNVMRGEETQVIGALQQQRQSELLIGLPGTHSKWVRVVEGRIEHFDTFMT 181 Query: 193 GEMYAVLSNHSILGRTMQRDGAVDATDDAAFVRGALVAKSSDGRAGMLSNIFSSRTLGLT 252 GE+Y L H+ILGRTM + D DDAAFVRGA VA+ G+AG+LSNIFSSRTLGLT Sbjct: 182 GEVYGALCGHTILGRTMHKP---DVPDDAAFVRGARVAQGPQGQAGVLSNIFSSRTLGLT 238 Query: 253 GELSPR 258 GEL+P Sbjct: 239 GELAPE 244 >Q6J672.1 Q6J672_9BURK 2-keto-3-deoxy-galactonokinase Length = 341 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 147/262 (56%), Positives = 184/262 (70%), Gaps = 18/262 (6%) Query: 6 PSTSSTGLIALDWGTTSLRAYRFDADGRVADRRALPWGVMNLPPAEDGAGASANSANSAD 65 P+ T LIALDWGT+SLRAYR A G+ + RALP G+M LP A G A+ + Sbjct: 3 PAPHQTHLIALDWGTSSLRAYRLGAHGQTLELRALPCGIMQLPAAASGDKAAL------E 56 Query: 66 AGFRRALQAACGDWLRDSPATPLIAAGMVGSKQGWREAPYLDVPLAVSEVGNTMTIVDTG 125 A F A + ACGDWLR P TP+IAAGMVGS+QGW E PYL+VP+AV +G +++++ Sbjct: 57 ADFEAAFEQACGDWLRAEPGTPVIAAGMVGSRQGWLEVPYLEVPIAVDRIGASLSLLRNR 116 Query: 126 FGVPLHIVPGLLQRSALPNVMRGEETQVAGILDQLQVD----DILIGLPGTHSKWVHVR- 180 G P+H+VPGL++ + LPNVMRGEETQV G+L+ L D D+LIGLPGTHSKWV +R Sbjct: 117 HGQPIHLVPGLIENAMLPNVMRGEETQVVGVLNALNQDTAETDVLIGLPGTHSKWVQIRR 176 Query: 181 -GK--RIEHFDTFMTGEMYAVLSNHSILGRTMQRDGAVDATD----DAAFVRGALVAKSS 233 GK ++ HFDTFMTGE++A LS H+ILGR MQ D D AF RGALVA+S+ Sbjct: 177 AGKLCQLAHFDTFMTGEVFAALSGHTILGRGMQAGEGKDKDDAGAGQQAFERGALVARSA 236 Query: 234 DGRAGMLSNIFSSRTLGLTGEL 255 G+AG+LS IFS+RTLGLTG L Sbjct: 237 AGQAGVLSTIFSTRTLGLTGVL 258 >Q21ZV9.1 Q21ZV9_RHOFD 2-keto-3-deoxygalactonate kinase EC=2.7.1.58 Length = 351 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/266 (56%), Positives = 180/266 (67%), Gaps = 24/266 (9%) Query: 9 SSTGLIALDWGTTSLRAYRFDADGRVADRRALPWGVMNLPPAEDGAGASANSANSADAGF 68 T LIALDWGT+SLRAYR A GRV + R+LPWGVM LP NS + AGF Sbjct: 6 CQTQLIALDWGTSSLRAYRLGAAGRVLELRSLPWGVMKLPEVV----LPENSGDDGKAGF 61 Query: 69 RRALQAACGDWLRDSPATPLIAAGMVGSKQGWREAPYLDVPLAVSEVGNTMTIVDTGFGV 128 A + ACGDW+R +P P+IAAGMVGS+QGWREAPYL +P+AV +G+T++ V T G Sbjct: 62 EFAFEEACGDWIRAAPHAPVIAAGMVGSRQGWREAPYLSLPIAVDRIGSTLSTVHTRNGQ 121 Query: 129 PLHIVPGLLQRSALPNVMRGEETQVAGILDQL-------------QVDDILIGLPGTHSK 175 +HIVPGL++ SALPNVMRGEETQV G L L + ++ILIGLPG+HSK Sbjct: 122 IVHIVPGLIENSALPNVMRGEETQVIGALSMLDFGKTPSRAEQQNEQNEILIGLPGSHSK 181 Query: 176 WVHVRGK------RIEHFDTFMTGEMYAVLSNHSILGRTMQRDGAVDATDDAAFVRGALV 229 WV VR + IEHF TFMTGE+YA L H+ILGR M V+ D AAF RG LV Sbjct: 182 WVQVRIQHREVQSHIEHFHTFMTGEVYAALCEHTILGRGMPTSD-VNGDDHAAFDRGVLV 240 Query: 230 AKSSDGRAGMLSNIFSSRTLGLTGEL 255 ++ GRAG+LS IFS+RTLGLTGEL Sbjct: 241 PQTPAGRAGVLSTIFSTRTLGLTGEL 266 >D4X3H8.1 D4X3H8_9BURK 2-dehydro-3-deoxygalactonate kinase EC=2.7.1.58 Length = 349 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 152/268 (56%), Positives = 183/268 (68%), Gaps = 23/268 (8%) Query: 1 MTQATPSTSSTGLIALDWGTTSLRAYRFDADGRVADRRALPWGVMNLP-PAEDGAGASAN 59 MT +TP+ ++ LIALDWGT+SLRAYR D GR D R LPWG+M LP P +DGA Sbjct: 1 MTPSTPARAA--LIALDWGTSSLRAYRLDNAGRTLDTRHLPWGIMRLPQPLQDGA----- 53 Query: 60 SANSADAGFRRALQAACGDWLRDSPATPLIAAGMVGSKQGWREAPYLDVPLAVSEVGNTM 119 A++ +GF A ACGDWLR P P+IA GMVGS QGW+EA YLDVP+ + +G + Sbjct: 54 -ASTPLSGFDLAFDQACGDWLRAEPTLPVIACGMVGSAQGWQEAAYLDVPVDLERIGTLL 112 Query: 120 TIVDTGFG----VPLHIVPGLLQRSALPNVMRGEETQVAGIL-------DQLQVDDILIG 168 T+V+ PLHIVPGL+QR LPNVMRGEETQV G++ D D++LIG Sbjct: 113 TVVERPAAGPNATPLHIVPGLIQRHGLPNVMRGEETQVFGVMFDQTRGSDAHPADNVLIG 172 Query: 169 LPGTHSKWVHVRGKRIEHFDTFMTGEMYAVLSNHSILGRTMQRDGAVDATDDAAFVRGAL 228 LPGTHSKWV+ R R+ HFDTFMTGE+YAVL H+ILGRTM A D AAF RG Sbjct: 173 LPGTHSKWVNARRGRVTHFDTFMTGEVYAVLRGHTILGRTMSE---APAPDMAAFERGVK 229 Query: 229 VAKSSDGRAGMLSNIFSSRTLGLTGELS 256 VA + GRAG+LS IFS+R LGLTGEL+ Sbjct: 230 VAGAPAGRAGVLSTIFSTRALGLTGELA 257 >E5U507.1 E5U507_ALCXX 2-keto-3-deoxy-galactonokinase Length = 338 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 150/260 (57%), Positives = 181/260 (69%), Gaps = 14/260 (5%) Query: 1 MTQATPSTSSTGLIALDWGTTSLRAYRFDADGRVADRRALPWGVMNLP-PAEDGAGASAN 59 MT +P+ ++ LIALDWGT+SLRAYR D GR D R LPWG+M LP P +DGA Sbjct: 1 MTTGSPARAA--LIALDWGTSSLRAYRLDGAGRTLDTRHLPWGIMRLPQPLQDGA----- 53 Query: 60 SANSADAGFRRALQAACGDWLRDSPATPLIAAGMVGSKQGWREAPYLDVPLAVSEVGNTM 119 + S +GF A + ACGDWLR P P+IA GMVGS QGW+EA YLDVP+ ++ +G + Sbjct: 54 ATPSGQSGFELAFEQACGDWLRAEPQLPVIACGMVGSAQGWQEAAYLDVPVDLARIGTLL 113 Query: 120 TIVDTGFGVPLHIVPGLLQRSALPNVMRGEETQVAGIL-DQL--QVDDILIGLPGTHSKW 176 T V+ P+HIVPGL+QR LPNVMRGEETQV G+L DQ D +LIGLPGTHSKW Sbjct: 114 TRVERNGATPVHIVPGLIQRHGLPNVMRGEETQVFGVLFDQAGDPADSVLIGLPGTHSKW 173 Query: 177 VHVRGKRIEHFDTFMTGEMYAVLSNHSILGRTMQRDGAVDATDDAAFVRGALVAKSSDGR 236 V+ R ++ HFDTFMTGE+YA L H+ILGRTM A+D AAF RG VA GR Sbjct: 174 VNARRGQVTHFDTFMTGEVYAALRGHTILGRTMVE---APASDMAAFERGLKVAGVPAGR 230 Query: 237 AGMLSNIFSSRTLGLTGELS 256 AG+LS IFS+R LGLTGEL+ Sbjct: 231 AGVLSTIFSTRALGLTGELA 250