BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0064.p (297 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1WS08.1 GLUQ_VEREI Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- 427 e-118 D8IQE3.1 D8IQE3_HERSS Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- 426 e-117 A4G2D0.1 A4G2D0_HERAR Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- 408 e-112 A6SVC2.1 GLUQ_JANMA Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- 402 e-110 Q142Q0.1 Q142Q0_BURXL Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- 328 5e-88 >A1WS08.1 GLUQ_VEREI Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- Length = 292 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/286 (73%), Positives = 231/286 (80%) Query: 6 HYVGRFAPSPSGPLHAGSLAAAMASYLDARVHGGRWLLRIEDIDETRTVDGAAHEIETAL 65 HY GRFAPSPSGPLHAGSL AAMASYLDAR H GRWLLR+ED+DE RTV GAA +I +L Sbjct: 5 HYTGRFAPSPSGPLHAGSLVAAMASYLDARAHQGRWLLRMEDVDEARTVQGAAQDIAASL 64 Query: 66 HTLGMRWDGPVLVQSERKQRYLDACTRLSGHVYPCGCTRKEIADSSLGTGADGAAIYPGT 125 LGM WDGPVLVQS R+Q Y AC +L VY CGCTRKEIADS LG ADGAAIYPGT Sbjct: 65 SQLGMHWDGPVLVQSRRQQHYQRACAQLGERVYACGCTRKEIADSRLGMAADGAAIYPGT 124 Query: 126 CRHGLAPGKQARTVRLRVPDTGEENEEISFMDRWLGRQRQHLATQAGDFVLKRADGFWAY 185 CR GLA GK+A +R+RVP+ G+ E+I F DRW G QRQHLA+ GDFVL+RADGFWAY Sbjct: 125 CRSGLAAGKRAHALRVRVPEPGQALEQIDFEDRWQGWQRQHLASAVGDFVLRRADGFWAY 184 Query: 186 QLAVVVDDAEQGVTHVVRGADLLGSTARQIYLQRLLGYPTPAYLHVPLVLHNDGEKLSKQ 245 QLAVVVDDAEQGVTH+VRGADLLGSTARQIYLQ LLGYPTP YLH+PLV H DGEKLSKQ Sbjct: 185 QLAVVVDDAEQGVTHIVRGADLLGSTARQIYLQSLLGYPTPTYLHLPLVTHADGEKLSKQ 244 Query: 246 NGAQALDLARPLEELQRAATFLGLDMTTATEVAAFWEQALPAWQRR 291 NGAQAL+L R L L AA FLGL++ VAAFWE A+ AW+RR Sbjct: 245 NGAQALNLNRSLTLLHEAARFLGLEVARVDGVAAFWELAVLAWRRR 290 >D8IQE3.1 D8IQE3_HERSS Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- Length = 294 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 211/286 (73%), Positives = 231/286 (80%) Query: 7 YVGRFAPSPSGPLHAGSLAAAMASYLDARVHGGRWLLRIEDIDETRTVDGAAHEIETALH 66 YVGRFAPSPSGPLHAGSL AA+ASYLDARVH GRWLLRIEDIDETRTV GAA +I L Sbjct: 6 YVGRFAPSPSGPLHAGSLVAALASYLDARVHAGRWLLRIEDIDETRTVQGAAQDIIATLA 65 Query: 67 TLGMRWDGPVLVQSERKQRYLDACTRLSGHVYPCGCTRKEIADSSLGTGADGAAIYPGTC 126 L MR DGPVLVQS+RK RY A RL YPCGC+RKEIADS +GT +DGAA+YPGTC Sbjct: 66 ALDMRSDGPVLVQSQRKARYQLARDRLGALAYPCGCSRKEIADSRVGTASDGAALYPGTC 125 Query: 127 RHGLAPGKQARTVRLRVPDTGEENEEISFMDRWLGRQRQHLATQAGDFVLKRADGFWAYQ 186 RHGLAPGKQART+RLRVPD G+ E + F DRWLG Q QHLA + GDFVL+RADGFWAYQ Sbjct: 126 RHGLAPGKQARTLRLRVPDPGQAGELVQFEDRWLGPQAQHLAAEVGDFVLQRADGFWAYQ 185 Query: 187 LAVVVDDAEQGVTHVVRGADLLGSTARQIYLQRLLGYPTPAYLHVPLVLHNDGEKLSKQN 246 LAVVVDDAEQGVT +VRGADLL STARQIYLQ LLGYPTP YLHVPL+++ GEK SKQN Sbjct: 186 LAVVVDDAEQGVTDIVRGADLLDSTARQIYLQGLLGYPTPRYLHVPLLMNETGEKFSKQN 245 Query: 247 GAQALDLARPLEELQRAATFLGLDMTTATEVAAFWEQALPAWQRRL 292 GAQALDL +PL+ LQ+AA FLGLD A + FW AL WQ R Sbjct: 246 GAQALDLNQPLQALQQAAAFLGLDTGAARDREGFWALALTGWQARF 291 >A4G2D0.1 A4G2D0_HERAR Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- Length = 319 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 202/291 (69%), Positives = 225/291 (77%) Query: 2 NNIEHYVGRFAPSPSGPLHAGSLAAAMASYLDARVHGGRWLLRIEDIDETRTVDGAAHEI 61 N I Y GRFAPSPSGPLHAGSL AAMASYLDA+ H G WLLRIEDIDETRTV GA I Sbjct: 26 NPINPYTGRFAPSPSGPLHAGSLVAAMASYLDAKAHRGLWLLRIEDIDETRTVPGAIAAI 85 Query: 62 ETALHTLGMRWDGPVLVQSERKQRYLDACTRLSGHVYPCGCTRKEIADSSLGTGADGAAI 121 AL GM+ DG VLVQS+RK Y A RL+GHVYPCGCTRKEI+DS LG DGAAI Sbjct: 86 MQALAIFGMQHDGEVLVQSQRKDVYQAAFDRLAGHVYPCGCTRKEISDSRLGIAPDGAAI 145 Query: 122 YPGTCRHGLAPGKQARTVRLRVPDTGEENEEISFMDRWLGRQRQHLATQAGDFVLKRADG 181 YPGTCR GL GK +RT+R+RVPD G+E+E I+F DRWLG Q QHLAT+ GDFVLKRADG Sbjct: 146 YPGTCRDGLNAGKVSRTLRVRVPDIGQEDESITFNDRWLGPQTQHLATEVGDFVLKRADG 205 Query: 182 FWAYQLAVVVDDAEQGVTHVVRGADLLGSTARQIYLQRLLGYPTPAYLHVPLVLHNDGEK 241 +WAYQLAVVVDDAEQGVTH+VRG DLL STARQIYLQ +LG TP+Y+HVP+VL+ GEK Sbjct: 206 YWAYQLAVVVDDAEQGVTHIVRGTDLLESTARQIYLQHMLGLATPSYMHVPVVLNEVGEK 265 Query: 242 LSKQNGAQALDLARPLEELQRAATFLGLDMTTATEVAAFWEQALPAWQRRL 292 LSKQ GAQALDLA PL EL AA FL L A + +FW+ A+ W R Sbjct: 266 LSKQTGAQALDLAHPLNELLHAARFLELQSGRANSIESFWQGAIAEWAHRF 316 >A6SVC2.1 GLUQ_JANMA Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- Length = 293 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/286 (68%), Positives = 222/286 (77%) Query: 7 YVGRFAPSPSGPLHAGSLAAAMASYLDARVHGGRWLLRIEDIDETRTVDGAAHEIETALH 66 Y+GRFAPSPSGPLHAGSL AAMASYLDA+ H G+WL+RIEDIDETRTV A I AL Sbjct: 5 YIGRFAPSPSGPLHAGSLVAAMASYLDAKAHQGQWLVRIEDIDETRTVADATTAIMDALA 64 Query: 67 TLGMRWDGPVLVQSERKQRYLDACTRLSGHVYPCGCTRKEIADSSLGTGADGAAIYPGTC 126 GM+ DG V+VQS+RK Y A RL VYPCGCTR+EIADS LG ADGAAIYPGTC Sbjct: 65 VFGMQHDGEVVVQSQRKDLYQAAFERLKDLVYPCGCTRREIADSRLGVAADGAAIYPGTC 124 Query: 127 RHGLAPGKQARTVRLRVPDTGEENEEISFMDRWLGRQRQHLATQAGDFVLKRADGFWAYQ 186 RHGLA GK ART R+RVPD E NE I+F DRWLG QHLA++ GDFVLKRADGFWAYQ Sbjct: 125 RHGLAAGKTARTWRVRVPDANENNEAINFDDRWLGPLTQHLASEVGDFVLKRADGFWAYQ 184 Query: 187 LAVVVDDAEQGVTHVVRGADLLGSTARQIYLQRLLGYPTPAYLHVPLVLHNDGEKLSKQN 246 LAVVVDDA+Q VTH+VRG DLL ST RQIYLQR+LG+PTP Y+HVP+VL++ GEKLSKQ Sbjct: 185 LAVVVDDADQEVTHIVRGTDLLESTGRQIYLQRMLGFPTPHYMHVPVVLNDVGEKLSKQT 244 Query: 247 GAQALDLARPLEELQRAATFLGLDMTTATEVAAFWEQALPAWQRRL 292 GA ALDLA P++EL +AA FL L + + FW A+ AW RR Sbjct: 245 GALALDLAHPMDELMKAARFLELSLPPVNSITEFWRVAIAAWARRF 290 >Q142Q0.1 Q142Q0_BURXL Glutamyl-Q tRNA(Asp) synthetase EC=6.1.1.- Length = 296 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 180/292 (61%), Positives = 209/292 (71%), Gaps = 9/292 (3%) Query: 7 YVGRFAPSPSGPLHAGSLAAAMASYLDARVHGGRWLLRIEDIDETRTVDGAAHEIETALH 66 Y GRFAPSP+GPLH GSL +A+AS+LDAR H G WL+RIEDID RTV GAA +I L Sbjct: 3 YRGRFAPSPTGPLHFGSLVSALASWLDARAHRGAWLVRIEDIDRPRTVPGAAEDILATLE 62 Query: 67 TLGMRWDGPVLVQSERKQRYLDACTRL--SGHVYPCGCTRKEIADSSLGTGADGAAI-YP 123 GMR D P + QS R RY A +L +G +YPCGCTRKEIADS L A + YP Sbjct: 63 RFGMRADEPPVWQSTRLARYEQALEQLKAAGLIYPCGCTRKEIADSLLHAHARNTTLAYP 122 Query: 124 GTCRHGLAPGKQARTVRLRVPDTGEENEEISFMDRWLGRQRQHLATQAGDFVLKRADGFW 183 GTCR GL GK AR RLRVPD + I+F DRW GRQ Q+LAT+ GDFVLKRAD W Sbjct: 123 GTCRAGLH-GKPARAWRLRVPDG--DAAIITFEDRWQGRQTQNLATEVGDFVLKRADDQW 179 Query: 184 AYQLAVVVDDAEQGVTHVVRGADLLGSTARQIYLQRLLGYPTPAYLHVPLVLHNDGEKLS 243 AYQLAVVVDDA+ G+TH+VRGADL+ STARQIYLQR LG PTP YLHVP+V ++ GEKLS Sbjct: 180 AYQLAVVVDDADAGITHIVRGADLMDSTARQIYLQRCLGVPTPEYLHVPVVTNDHGEKLS 239 Query: 244 KQNGAQALDLARPLEELQRAATFLGLDMTTA---TEVAAFWEQALPAWQRRL 292 KQNGA ALD +PLE L AA LGLD+ +A T +A F+ A AW +R+ Sbjct: 240 KQNGATALDKDKPLEALSAAARHLGLDLQSAAAHTTLAGFYAAATVAWAKRM 291