BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0060.p (1149 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQD8.1 D8IQD8_HERSS DNA polymerase III (Alpha chain) protein E... 2044 0.0 F1W087.1 F1W087_9BURK DNA polymerase III alpha subunit 1890 0.0 A4G2D5.1 A4G2D5_HERAR DNA polymerase III, alpha subunit EC=2.7.7.7 1877 0.0 A6SVC7.1 A6SVC7_JANMA DNA polymerase III alpha subunit 1868 0.0 C3X7L4.1 C3X7L4_OXAFO DNA polymerase III alpha subunit 1641 0.0 >D8IQD8.1 D8IQD8_HERSS DNA polymerase III (Alpha chain) protein EC=2.7.7.7 Length = 1152 Score = 2044 bits (5296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 976/1152 (84%), Positives = 1069/1152 (92%), Gaps = 3/1152 (0%) Query: 1 MTTPQFVHLRLHSEYSIVDGLVRIDDVVKAAAKDGQAALAITDLANLFGMVKFYKGARGK 60 MTTPQFVHLR+HSEYSIVDGLVRIDD+VKAAAKDGQAALA+TDLANLF MV+FYK ARGK Sbjct: 1 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK 60 Query: 61 GVKPIAGCDVWISNDDDRDKPTRLLLLVKDHHGYLQLCDLLSRAWLTNLHRGRAELRPEW 120 GVKPIAGCD+WI+ND DR+KP RLL+L+K+ HGYLQLC++LS+AWL N ++GRAE+R EW Sbjct: 61 GVKPIAGCDLWITNDADREKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEW 120 Query: 121 LEQLRHDEGGNGLIALSGAHFGDVGIAIENGNVAAAERAAQRWSEVFPGAFYVEIQRANQ 180 L+ LRH EGGNGLIALSGA GD+G AI+NGN+A AE A+RW+E+FPGAFY+E+QRA Q Sbjct: 121 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQ 180 Query: 181 PNMEVQVRQSVALAARLALPVVATHPIQFLSQDEFVAHEARTCIAEGEILANARRVRRFN 240 NMEVQVRQSVAL A+L LP VATHPIQF S +EF+AHEARTCIAEGEI+ANARRVRRFN Sbjct: 181 ANMEVQVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN 240 Query: 241 EQQNFKTQAEMAALFADLPGAVQNTIEIAKRCNLMLTLGKPQLPNFPTPDGMTIDDFLVA 300 EQQ FK+QAEM LFADLPGAV NT+EIAKRCNL+L LGKPQLP+FPTPDGMTIDDFLVA Sbjct: 241 EQQYFKSQAEMVELFADLPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA 300 Query: 301 ETKIGLEARLKHLYPDEARREKERPRYEARLKFENDTIIKMKFPGYFLIVADFIQWAKNN 360 +TK GLE RLK L+P+EA REK+RPRYEARL+FEN+TIIKMKFPGYFLIVADFIQWAKNN Sbjct: 301 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN 360 Query: 361 GVPVGPGRGSGAGSLVAYALSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY L ITDLDPL YNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 361 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA Sbjct: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMX---VLIAPGKLTDFCPLYTQG 537 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGM VLIAPGKLTDFCPLYTQG Sbjct: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 Query: 538 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKQLDPAMADFDLARLPLTDR 597 GD+GVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYI+ LDPAMADFDLA+LPL DR Sbjct: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR 600 Query: 598 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 657 SY+LLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH Sbjct: 601 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 660 Query: 658 GEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 717 GE FDYPDPRTEGILSETYGIMVYQEQVMQMAQV+GGYSLGGADLLRRAMGKKKAEEMA+ Sbjct: 661 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK 720 Query: 718 HRNIFREGAAKDGLSQEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 777 HR +FREGAAK+GL Q KADEIFDLMEKFAGYGFNKSHAAAYALLSY+TAYLKAHHPAAF Sbjct: 721 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF 780 Query: 778 MAANLSLAMDDTEKIKILVEDSLDVCGLSLLPPDINLSDYRFIPVGEPGKKAVHIRYGLG 837 MAANLSLAM+DT+K+KIL+ED++D+C L++LPPDIN SDYRF+PVGEPGKKA IRYGLG Sbjct: 781 MAANLSLAMEDTDKVKILIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG 840 Query: 838 AVKGSGQSAIEAIIAARQDGPFKDLFDFAKRVDKKQINRRTVDSLIRAGAFDCFGVDRAI 897 AVKG+GQ+AIEAI+ AR+ GPFKDLFDFAKRVDKKQINRRT+DSLIRAGAFDCF VDRA+ Sbjct: 841 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAV 900 Query: 898 LQATVGLAWENAEQMEASANQVSLFGGDDSDLETPLEYVQVRPWSDKQRLTEEKTALGFY 957 LQA+V LAWE+AEQ E SANQVSLFGGDDSDLE PLEYVQV PWSDKQRLTEEK ALGFY Sbjct: 901 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFY 960 Query: 958 LSGHLFDAYEKEVRQFVRTKISSLEPSRDPRSLAGIITGIRVQMTQRGKLLIVSLDDGSG 1017 LSGHLF AYEKEVR+FVRTKI+SLEPS +PRSLAGIITG+RVQMTQRGKL+I +LDDG+G Sbjct: 961 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG 1020 Query: 1018 TVDVTVYGELAEPNKAFFKEDELLIVQGKVSEDRFNGGLRISAEKVMDIGAARIQYGQRV 1077 ++ T+Y EL EP K KEDELL+V GKVSEDRFNGGLR++A+KVMD+GAARIQYG R+ Sbjct: 1021 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM 1080 Query: 1078 VVSLNKSVDPVHLRDTLSSYRQPQGLPFVMKYVQSGVGCEVMLGDAWRVVPSDGLQVSLR 1137 VVS+NK++DP HLRDTLS++RQ QGLPFVM+Y Q+ CEV+LGDAWR+ PSD LQ +L Sbjct: 1081 VVSINKAIDPNHLRDTLSAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLV 1140 Query: 1138 ESFGQEAVVVEY 1149 SFG+EAVVVEY Sbjct: 1141 ASFGKEAVVVEY 1152 >F1W087.1 F1W087_9BURK DNA polymerase III alpha subunit Length = 1177 Score = 1890 bits (4895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 928/1152 (80%), Positives = 1027/1152 (89%), Gaps = 6/1152 (0%) Query: 1 MTTPQFVHLRLHSEYSIVDGLVRIDDVVKAAAKDGQAALAITDLANLFGMVKFYKGARGK 60 MT+PQF HLRLHSEYSIVDGL+RIDDVV AAA D Q +LAITDLANLFGMVKFYK AR K Sbjct: 28 MTSPQFTHLRLHSEYSIVDGLIRIDDVVDAAAADSQPSLAITDLANLFGMVKFYKAARKK 87 Query: 61 GVKPIAGCDVWISNDDDRDKPTRLLLLVKDHHGYLQLCDLLSRAWLTNLHRGRAELRPEW 120 G+KPI GCDVWI+NDDDRDKP+RLLLL K+ GYLQLC+L+S+AWL+NLHRGRAE+R EW Sbjct: 88 GIKPIIGCDVWITNDDDRDKPSRLLLLAKNAAGYLQLCELISQAWLSNLHRGRAEIRTEW 147 Query: 121 LEQLRHDEGGNGLIALSGAHFGDVGIAIENGNVAAAERAAQRWSEVFPGAFYVEIQRANQ 180 LE+L NGLIAL+GAHFGDVGIAIENGN+ AAER AQRWS +FPG FY+EIQRA Q Sbjct: 148 LEKL---SPANGLIALAGAHFGDVGIAIENGNLPAAERNAQRWSRIFPGHFYIEIQRAGQ 204 Query: 181 PNMEVQVRQSVALAARLALPVVATHPIQFLSQDEFVAHEARTCIAEGEILANARRVRRFN 240 PN E QVRQ VALAARL LPVVATHPIQFL+++EF+AHEARTCI+EGE+LAN+RRVRRFN Sbjct: 205 PNQEAQVRQLVALAARLQLPVVATHPIQFLTKEEFIAHEARTCISEGEMLANSRRVRRFN 264 Query: 241 EQQNFKTQAEMAALFADLPGAVQNTIEIAKRCNLMLTLGKPQLPNFPTPDGMTIDDFLVA 300 ++Q F TQAEMA LFADLP A+QN+ EIAKRCNL L LGKP+LP+FPTP+GMTI DFLVA Sbjct: 265 DRQCFTTQAEMAGLFADLPAALQNSNEIAKRCNLTLQLGKPRLPDFPTPEGMTIGDFLVA 324 Query: 301 ETKIGLEARLKHLYPDEARREKERPRYEARLKFENDTIIKMKFPGYFLIVADFIQWAKNN 360 E + GLE RL LYPDE +RE ER RY RL FE +TIIKM FPGYFLIVADFIQWAKNN Sbjct: 325 EARSGLERRLLQLYPDETKREAERQRYADRLDFETNTIIKMGFPGYFLIVADFIQWAKNN 384 Query: 361 GVPVGPGRGSGAGSLVAYALSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY+LSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 385 GVPVGPGRGSGAGSLVAYSLSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 444 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKDRYGKEAVSQIATFGTMAAKGA+RDVGRVLD+GYNFCDGISKLIPFKPGK VT+A Sbjct: 445 IQYVKDRYGKEAVSQIATFGTMAAKGAIRDVGRVLDMGYNFCDGISKLIPFKPGKQVTIA 504 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMX---VLIAPGKLTDFCPLYTQG 537 DAI EEPLL ER ENE+EV+QL+ LAQQVEGIARNIGM V+IAPGKLTDFCPLYTQG Sbjct: 505 DAILEEPLLAERQENEDEVRQLLDLAQQVEGIARNIGMHAGGVVIAPGKLTDFCPLYTQG 564 Query: 538 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKQLDPAMADFDLARLPLTDR 597 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILD AVRYIK+LDPAMADF L +LPL D+ Sbjct: 565 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAVRYIKRLDPAMADFSLEKLPLNDK 624 Query: 598 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 657 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKH Sbjct: 625 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKH 684 Query: 658 GEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 717 GE+FDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE Sbjct: 685 GERFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 744 Query: 718 HRNIFREGAAKDGLSQEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 777 HR IFR+GAAKDGLS+ KADEIFDLMEKFAGYGFNKSHAAAYALL+YHTAYLKAHHPAAF Sbjct: 745 HRQIFRDGAAKDGLSEAKADEIFDLMEKFAGYGFNKSHAAAYALLAYHTAYLKAHHPAAF 804 Query: 778 MAANLSLAMDDTEKIKILVEDSLDVCGLSLLPPDINLSDYRFIPVGEPGKKAVHIRYGLG 837 MAANLSLAMDDTEKI+ILVED +DVC ++LLPPDIN SDYRF PVGEPGK+A IRYGLG Sbjct: 805 MAANLSLAMDDTEKIRILVEDVIDVCAMTLLPPDINQSDYRFTPVGEPGKRAKQIRYGLG 864 Query: 838 AVKGSGQSAIEAIIAARQDGPFKDLFDFAKRVDKKQINRRTVDSLIRAGAFDCFGVDRAI 897 AVKGSGQ AIEAI+AAR GPF DLFDFAKRVDK+Q+NRRTVDSLIRAGAFDCF VDRA+ Sbjct: 865 AVKGSGQGAIEAIVAARASGPFTDLFDFAKRVDKRQVNRRTVDSLIRAGAFDCFEVDRAV 924 Query: 898 LQATVGLAWENAEQMEASANQVSLFGGDDSDLETPLEYVQVRPWSDKQRLTEEKTALGFY 957 L A+V LA E AEQ EAS NQVSLFGGDDSDL+T EY++V PW+DKQRLTEEKTALGFY Sbjct: 925 LLASVALALEAAEQHEASINQVSLFGGDDSDLDTQPEYLKVAPWTDKQRLTEEKTALGFY 984 Query: 958 LSGHLFDAYEKEVRQFVRTKISSLEPSRDPRSLAGIITGIRVQMTQRGKLLIVSLDDGSG 1017 LSGHLF++Y +EVR+F RTK+SSLEPSRDPR +AGII +RVQMTQRGK++IV+LDD S Sbjct: 985 LSGHLFNSYAEEVRRFARTKLSSLEPSRDPRMIAGIIVSLRVQMTQRGKMVIVTLDDSSA 1044 Query: 1018 TVDVTVYGELAEPNKAFFKEDELLIVQGKVSEDRFNGGLRISAEKVMDIGAARIQYGQRV 1077 TVDVTVY E+ + NK FKEDE L V GKVSEDRF+GGLRI+AEKVMDI AARIQYG+++ Sbjct: 1045 TVDVTVYNEIYDANKRMFKEDEFLCVSGKVSEDRFSGGLRITAEKVMDIAAARIQYGKQI 1104 Query: 1078 VVSLNKSVDPVHLRDTLSSYRQPQGLPFVMKYVQSGVGCEVMLGDAWRVVPSDGLQVSLR 1137 ++ + +D ++ L+ YR GLPF+++Y Q+G CE+ L D W+V+P+DGL+ +L Sbjct: 1105 TLAHSGKLDAAQIKTLLTPYRSEAGLPFLLRYTQAGAECELRLADEWKVLPADGLKQALA 1164 Query: 1138 ESFGQEAVVVEY 1149 E G+E V EY Sbjct: 1165 EKMGRECVEFEY 1176 >A4G2D5.1 A4G2D5_HERAR DNA polymerase III, alpha subunit EC=2.7.7.7 Length = 1153 Score = 1877 bits (4861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 903/1152 (78%), Positives = 1014/1152 (88%), Gaps = 3/1152 (0%) Query: 1 MTTPQFVHLRLHSEYSIVDGLVRIDDVVKAAAKDGQAALAITDLANLFGMVKFYKGARGK 60 M +PQF+HLRLHSEYSIVDGLVRIDDV+ AAA D Q +LAITDLANLFGMVKFYK AR K Sbjct: 1 MISPQFIHLRLHSEYSIVDGLVRIDDVIAAAAADAQPSLAITDLANLFGMVKFYKEARSK 60 Query: 61 GVKPIAGCDVWISNDDDRDKPTRLLLLVKDHHGYLQLCDLLSRAWLTNLHRGRAELRPEW 120 G+KPI GCDVWISND+DRDKP+RLLLLVK+ GYLQLC+LLS+AWLTNLHRGRAE+RPEW Sbjct: 61 GIKPIVGCDVWISNDNDRDKPSRLLLLVKNKTGYLQLCELLSKAWLTNLHRGRAEIRPEW 120 Query: 121 LEQLRHDEGGNGLIALSGAHFGDVGIAIENGNVAAAERAAQRWSEVFPGAFYVEIQRANQ 180 LEQL + NGLI LSGAHFGD+G+AI+NGN+AAAER A+RW+++FPG FY+E+QRA Q Sbjct: 121 LEQLAAEGKPNGLIVLSGAHFGDIGMAIDNGNLAAAERHAKRWADMFPGHFYIEVQRAEQ 180 Query: 181 PNMEVQVRQSVALAARLALPVVATHPIQFLSQDEFVAHEARTCIAEGEILANARRVRRFN 240 PNM+ VRQ+ LAA+L LP+VATHP+QFL Q+EF AHEARTCI+EGEILAN RR++RFN Sbjct: 181 PNMDAHVRQASVLAAKLNLPLVATHPVQFLDQNEFTAHEARTCISEGEILANPRRIKRFN 240 Query: 241 EQQNFKTQAEMAALFADLPGAVQNTIEIAKRCNLMLTLGKPQLPNFPTPDGMTIDDFLVA 300 E+Q F TQAEMA LFAD+P A+QN++EIAKRCNLML LGKP+LPNFPTPDG +ID+FLV Sbjct: 241 ERQRFTTQAEMAELFADMPNALQNSVEIAKRCNLMLELGKPKLPNFPTPDGSSIDEFLVK 300 Query: 301 ETKIGLEARLKHLYPDEARREKERPRYEARLKFENDTIIKMKFPGYFLIVADFIQWAKNN 360 E + GLE RL+HLYPD +REK R RY+ARLKFE DTII M FPGYFLIVADFI+WAKNN Sbjct: 301 EAQRGLEGRLQHLYPDPEQREKNRERYQARLKFETDTIIHMGFPGYFLIVADFIKWAKNN 360 Query: 361 GVPVGPGRGSGAGSLVAYALSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY+L ITDLDPL+YNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 361 GVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKD+YGK+AVSQIATFGTMAAKGAVRDVGRVLD GYNFCDGISKLIPFKPGKLVT+A Sbjct: 421 IQYVKDQYGKDAVSQIATFGTMAAKGAVRDVGRVLDFGYNFCDGISKLIPFKPGKLVTIA 480 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMX---VLIAPGKLTDFCPLYTQG 537 DAI+EEPLL ERLENEEEVKQL+ LAQ+VEGIARNIGM VLIAPGKLTDFCPLYTQG Sbjct: 481 DAIKEEPLLAERLENEEEVKQLLELAQKVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 Query: 538 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKQLDPAMADFDLARLPLTDR 597 GD+GVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIK LDPAMADF L +LPL DR Sbjct: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKDLDPAMADFSLEKLPLNDR 600 Query: 598 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 657 SYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKH Sbjct: 601 PSYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKH 660 Query: 658 GEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 717 GE+F+YPDPRTE ILSETYGIMVYQEQVMQMAQV+GGYSLGGADLLRRAMGKKKAEEMA+ Sbjct: 661 GERFEYPDPRTEAILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAQ 720 Query: 718 HRNIFREGAAKDGLSQEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 777 HR +FR GAAK+ LS EKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF Sbjct: 721 HRELFRAGAAKNDLSAEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 780 Query: 778 MAANLSLAMDDTEKIKILVEDSLDVCGLSLLPPDINLSDYRFIPVGEPGKKAVHIRYGLG 837 MAANLSLAMDDT+KIKILVED+LDVCGL+LLPPDIN SDYRF PVG PGKKA IRYGLG Sbjct: 781 MAANLSLAMDDTDKIKILVEDTLDVCGLTLLPPDINQSDYRFTPVGVPGKKATQIRYGLG 840 Query: 838 AVKGSGQSAIEAIIAARQDGPFKDLFDFAKRVDKKQINRRTVDSLIRAGAFDCFGVDRAI 897 AVKGSG+ AI+AI+ ARQ PF DLFDF KRVDK+QINRRT+DSLIRAGAFDCF +DRA+ Sbjct: 841 AVKGSGKGAIDAIVNARQGKPFVDLFDFCKRVDKRQINRRTIDSLIRAGAFDCFNIDRAV 900 Query: 898 LQATVGLAWENAEQMEASANQVSLFGGDDSDLETPLEYVQVRPWSDKQRLTEEKTALGFY 957 L A+VG A E AEQ EASANQVSLFGGDDSD+ETP EYV+ PWSDKQ+LTEEK ALGFY Sbjct: 901 LLASVGFAMECAEQAEASANQVSLFGGDDSDMETPPEYVKASPWSDKQKLTEEKAALGFY 960 Query: 958 LSGHLFDAYEKEVRQFVRTKISSLEPSRDPRSLAGIITGIRVQMTQRGKLLIVSLDDGSG 1017 LSGHLFDAY +EVR+F RTK+S+LEPSR+PR++AG+I+G+R QMTQRG+++IV+LDDGS Sbjct: 961 LSGHLFDAYAEEVRRFARTKLSNLEPSREPRTIAGVISGVRTQMTQRGRMIIVTLDDGSA 1020 Query: 1018 TVDVTVYGELAEPNKAFFKEDELLIVQGKVSEDRFNGGLRISAEKVMDIGAARIQYGQRV 1077 TVDVTVY E+ + N+ FKEDE L V GK+SEDRF+GGLRI+AEKVMDI A RIQY + + Sbjct: 1021 TVDVTVYNEVFDANRNLFKEDEFLAVSGKISEDRFSGGLRITAEKVMDIAAVRIQYAKCI 1080 Query: 1078 VVSLNKSVDPVHLRDTLSSYRQPQGLPFVMKYVQSGVGCEVMLGDAWRVVPSDGLQVSLR 1137 +SL S D L TL + + G P V++Y E+ + WR+ P D + L Sbjct: 1081 YLSLQASADVNTLMATLQAAARADGSPVVIQYQNQKGVSELRFAEQWRINPDDNTKQKLI 1140 Query: 1138 ESFGQEAVVVEY 1149 + + ++ V + Y Sbjct: 1141 DLYSEKNVQIAY 1152 >A6SVC7.1 A6SVC7_JANMA DNA polymerase III alpha subunit Length = 1152 Score = 1868 bits (4839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 906/1152 (78%), Positives = 1011/1152 (87%), Gaps = 4/1152 (0%) Query: 1 MTTPQFVHLRLHSEYSIVDGLVRIDDVVKAAAKDGQAALAITDLANLFGMVKFYKGARGK 60 M +PQF+HLRLHSEYSIVDGL+RIDDV++AAA D Q ALAI+DLANLFGMVKFYK AR Sbjct: 1 MISPQFIHLRLHSEYSIVDGLIRIDDVIQAAAADMQPALAISDLANLFGMVKFYKEARSN 60 Query: 61 GVKPIAGCDVWISNDDDRDKPTRLLLLVKDHHGYLQLCDLLSRAWLTNLHRGRAELRPEW 120 G+KPI GCDVWISND+DRDKP+RLLLLVK+ GYLQLC+LLS+AWLTNLHRGRAE+RPEW Sbjct: 61 GIKPIVGCDVWISNDNDRDKPSRLLLLVKNKDGYLQLCELLSKAWLTNLHRGRAEIRPEW 120 Query: 121 LEQLRHDEGGNGLIALSGAHFGDVGIAIENGNVAAAERAAQRWSEVFPGAFYVEIQRANQ 180 LEQ+ D G NGLI LSGAHFGDVGIAI+NGN+ AAER AQRW+E+FPG FY+E+QRA Q Sbjct: 121 LEQVAAD-GKNGLIVLSGAHFGDVGIAIDNGNLGAAERCAQRWAELFPGHFYIEVQRAGQ 179 Query: 181 PNMEVQVRQSVALAARLALPVVATHPIQFLSQDEFVAHEARTCIAEGEILANARRVRRFN 240 PNM+ VRQ+ LAA+L LP+VATHP+QFL +EF AHEARTCI+EGEILAN RR++RFN Sbjct: 180 PNMDGHVRQASVLAAKLGLPLVATHPVQFLGLEEFTAHEARTCISEGEILANPRRIKRFN 239 Query: 241 EQQNFKTQAEMAALFADLPGAVQNTIEIAKRCNLMLTLGKPQLPNFPTPDGMTIDDFLVA 300 EQQ FKTQAEMA LFAD+P A+QN++EIAKRCNL+L LGKP+LPNFPTPDG +ID+FLV Sbjct: 240 EQQRFKTQAEMAELFADMPNALQNSVEIAKRCNLVLELGKPKLPNFPTPDGSSIDEFLVK 299 Query: 301 ETKIGLEARLKHLYPDEARREKERPRYEARLKFENDTIIKMKFPGYFLIVADFIQWAKNN 360 E + GL+ R++HLYPD A REK R RY+ARLKFE DTIIKM FPGYFLIVADFI+WAKNN Sbjct: 300 EAQRGLDQRMEHLYPDPAAREKHRERYQARLKFETDTIIKMGFPGYFLIVADFIKWAKNN 359 Query: 361 GVPVGPGRGSGAGSLVAYALSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY+L ITDLDPL+YNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 360 GVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 419 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKD+YGK+AVSQIATFGTMAAKGAVRDVGRVLD GYNFCDGISKLIPFKPGKLVT++ Sbjct: 420 IQYVKDQYGKDAVSQIATFGTMAAKGAVRDVGRVLDFGYNFCDGISKLIPFKPGKLVTIS 479 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMX---VLIAPGKLTDFCPLYTQG 537 DAI+EEPLL ERLENEEEVKQL+ LAQQVEGIARNIGM VLIAPGKLTDFCPLYTQG Sbjct: 480 DAIKEEPLLAERLENEEEVKQLLDLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 539 Query: 538 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKQLDPAMADFDLARLPLTDR 597 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIK LDPAMADF L +LPL DR Sbjct: 540 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKDLDPAMADFALEKLPLNDR 599 Query: 598 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 657 SY+LLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKH Sbjct: 600 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKH 659 Query: 658 GEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 717 GE+F+YPDPRTE ILSETYGIMVYQEQVMQMAQV+GGYSLGGADLLRRAMGKKKAEEMAE Sbjct: 660 GERFEYPDPRTESILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAE 719 Query: 718 HRNIFREGAAKDGLSQEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 777 HR +FR GA+K+ LS EKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF Sbjct: 720 HRELFRAGASKNDLSAEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 779 Query: 778 MAANLSLAMDDTEKIKILVEDSLDVCGLSLLPPDINLSDYRFIPVGEPGKKAVHIRYGLG 837 MAANLSLAMDDT+KIKILVED++D+CGLSLLPPDIN SDYRF PVG PGKKA IRYGLG Sbjct: 780 MAANLSLAMDDTDKIKILVEDAIDICGLSLLPPDINQSDYRFTPVGVPGKKATQIRYGLG 839 Query: 838 AVKGSGQSAIEAIIAARQDGPFKDLFDFAKRVDKKQINRRTVDSLIRAGAFDCFGVDRAI 897 AVKGSG+ AI+A+I AR++ PF DLFDFAKRVDK+QINRRT+DSLIRAGAFDCF VDRAI Sbjct: 840 AVKGSGKGAIDAVIEARKERPFTDLFDFAKRVDKRQINRRTIDSLIRAGAFDCFDVDRAI 899 Query: 898 LQATVGLAWENAEQMEASANQVSLFGGDDSDLETPLEYVQVRPWSDKQRLTEEKTALGFY 957 L A+V A E AEQ EA+ANQVSLFGGDDSDLETP EYV+V PWSDKQ+LTEEK ALGFY Sbjct: 900 LLASVAFAMECAEQAEAAANQVSLFGGDDSDLETPPEYVKVSPWSDKQKLTEEKAALGFY 959 Query: 958 LSGHLFDAYEKEVRQFVRTKISSLEPSRDPRSLAGIITGIRVQMTQRGKLLIVSLDDGSG 1017 LSGHLF+AY E R+F R K+SSLEPSR+PR++AG+I+G+R QMTQRG++ IV+LDDGS Sbjct: 960 LSGHLFNAYADEARRFARAKLSSLEPSREPRTIAGVISGLRTQMTQRGRITIVTLDDGSA 1019 Query: 1018 TVDVTVYGELAEPNKAFFKEDELLIVQGKVSEDRFNGGLRISAEKVMDIGAARIQYGQRV 1077 TVDVTVY EL + N+ FKEDE L V GKVSEDRF+GGLRI+AEKVMDI RIQY V Sbjct: 1020 TVDVTVYNELYDANRHMFKEDEFLAVTGKVSEDRFSGGLRITAEKVMDIAGVRIQYANCV 1079 Query: 1078 VVSLNKSVDPVHLRDTLSSYRQPQGLPFVMKYVQSGVGCEVMLGDAWRVVPSDGLQVSLR 1137 +SL S D L+ TL + G P V++Y E+ + WR+ P D ++ L Sbjct: 1080 RLSLPASTDINVLKATLQPAARADGSPVVIQYQNPKGVSELCFAEQWRINPDDNIKQKLI 1139 Query: 1138 ESFGQEAVVVEY 1149 + + + V + Y Sbjct: 1140 DLYSDKNVQIAY 1151 >C3X7L4.1 C3X7L4_OXAFO DNA polymerase III alpha subunit Length = 1153 Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust. Identities = 806/1153 (69%), Positives = 951/1153 (82%), Gaps = 8/1153 (0%) Query: 1 MTTPQFVHLRLHSEYSIVDGLVRIDDVVKAAAKDGQAALAITDLANLFGMVKFYKGARGK 60 M +FVHLRLHSEYSIVDGLVRI+DV+ AAAKDGQ A+A+TDLANLFG++KFYK AR K Sbjct: 1 MNNTRFVHLRLHSEYSIVDGLVRIEDVIAAAAKDGQPAMALTDLANLFGLIKFYKAARKK 60 Query: 61 GVKPIAGCDVWISNDDDRDKPTRLLLLVKDHHGYLQLCDLLSRAWLTNLHRGRAELRPEW 120 GVKPI GCDVWI+ND DR+KP+RLLLLVKD GYL LC+LLSR+WL N RGRAE+R EW Sbjct: 61 GVKPIGGCDVWITNDADREKPSRLLLLVKDRTGYLNLCELLSRSWLENQWRGRAEIRIEW 120 Query: 121 LEQLRHDEGGNGLIALSGAHFGDVGIAIENGNVAAAERAAQRWSEVFPGAFYVEIQRANQ 180 LE+L G GLIALSGA GD+G+A E AE+ A+RW+ +FP FY+EIQR Sbjct: 121 LEELSKKTGDMGLIALSGAKQGDIGMAFEASGFDNAEKCARRWASIFPDNFYIEIQRTGH 180 Query: 181 PNMEVQVRQSVALAARLALPVVATHPIQFLSQDEFVAHEARTCIAEGEILANARRVRRFN 240 ME +R +V LA +L LPVVATHP+QFLSQ+EF AHEARTCI+EGEIL+N RR FN Sbjct: 181 SGMEQYLRHAVELADKLQLPVVATHPVQFLSQEEFAAHEARTCISEGEILSNKRRAHNFN 240 Query: 241 EQQNFKTQAEMAALFADLPGAVQNTIEIAKRCNLMLTLGKPQLPNFPTPDGMTIDDFLVA 300 E+Q F TQ EMA LFADLPGA+QN++EIA+RCNL+L LG +LP FPTPDGMT+D+FL + Sbjct: 241 ERQYFYTQEEMAELFADLPGAIQNSVEIARRCNLVLELGHHKLPEFPTPDGMTLDEFLTS 300 Query: 301 ETKIGLEARLKHLYPDEARREKERPRYEARLKFENDTIIKMKFPGYFLIVADFIQWAKNN 360 E K GLE RL+ L+PDE R+ +RPRY+ RL +E TII M F GYFLIVADFI+WAKNN Sbjct: 301 EAKHGLEKRLEELFPDEEERKTQRPRYDERLDYEIGTIINMGFSGYFLIVADFIRWAKNN 360 Query: 361 GVPVGPGRGSGAGSLVAYALSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY+L IT+LDPL YNL+FERFLNPERVSMPDFD+DFCQ GRD+V Sbjct: 361 GVPVGPGRGSGAGSLVAYSLLITNLDPLAYNLIFERFLNPERVSMPDFDVDFCQHGRDKV 420 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKDRYGK+AVSQIATFGTMAAK AVRDVGRVLDLGYNFCDGISKLIPFKPGK VT+A Sbjct: 421 IQYVKDRYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYNFCDGISKLIPFKPGKQVTIA 480 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMX---VLIAPGKLTDFCPLYTQG 537 +A +EEPLL ER E+EEEVKQL+ LA+QVEGI RN+GM VLIAPGKLTDFCPLYTQG Sbjct: 481 EAKKEEPLLAEREESEEEVKQLLALAEQVEGITRNVGMHAGGVLIAPGKLTDFCPLYTQG 540 Query: 538 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKQLDPAMADFDLARLPLTDR 597 G+AGVVS +DK DVEAVGLVKFDFLGLTTLTILD AV+YI+QLDP MA+F+L +PL D+ Sbjct: 541 GEAGVVSHFDKSDVEAVGLVKFDFLGLTTLTILDLAVKYIRQLDPEMANFNLDTIPLDDK 600 Query: 598 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 657 A+YDLL KAKTVAVFQLESRGMQGMLKDA+PDRFEDIIALVALYRPGPMDLIPDFC+RKH Sbjct: 601 ATYDLLIKAKTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPDFCRRKH 660 Query: 658 GEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 717 GEKF+YPD RT+GILSETYGIMVYQEQVMQMAQV+GGY+LGGADLLRRAMGKK A EMA Sbjct: 661 GEKFEYPDERTKGILSETYGIMVYQEQVMQMAQVIGGYTLGGADLLRRAMGKKDANEMAR 720 Query: 718 HRNIFREGAAKDGLSQEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 777 HR IFR+GAAK+ L++ KADEIFDLMEKFAGYGFNKSHAAAYALLSY TA+LK HH AAF Sbjct: 721 HRQIFRDGAAKNDLTEAKADEIFDLMEKFAGYGFNKSHAAAYALLSYQTAFLKQHHAAAF 780 Query: 778 MAANLSLAMDDTEKIKILVEDSLDVCGLSLLPPDINLSDYRFIPVGEP---GKKAVH-IR 833 MAAN+SLAMDDT+K+K+LVED+++VCGL++LPPDIN S+Y F PVGE KK V IR Sbjct: 781 MAANMSLAMDDTDKVKVLVEDAVEVCGLTILPPDINHSEYYFTPVGEAPSVSKKPVSAIR 840 Query: 834 YGLGAVKGSGQSAIEAIIAARQDGPFKDLFDFAKRVDKKQINRRTVDSLIRAGAFDCFGV 893 YGLGAVKGSG+SAIEAI+ AR++ PF DLFDF RVDK QINRRT++SLIRAGAFDCF V Sbjct: 841 YGLGAVKGSGESAIEAIVKARKERPFTDLFDFCMRVDKHQINRRTIESLIRAGAFDCFNV 900 Query: 894 DRAILQATVGLAWENAEQMEASANQVSLFGGDDSDLETPLEYVQVRPWSDKQRLTEEKTA 953 DRA+L A+V LA E AEQ EASANQVSLFG +++ + T +EYVQV W++K +LTEEK Sbjct: 901 DRAVLLASVDLAIEAAEQAEASANQVSLFGEEEAVINT-VEYVQVPHWTEKHKLTEEKGV 959 Query: 954 LGFYLSGHLFDAYEKEVRQFVRTKISSLEPSRDPRSLAGIITGIRVQMTQRGKLLIVSLD 1013 LGF LSGHLF+AY E RQF +T+I LEPSRDP+ +AG+I+G R QMTQRGK++IV+LD Sbjct: 960 LGFCLSGHLFNAYAAEARQFAKTRIIELEPSRDPKWVAGVISGNRTQMTQRGKMMIVTLD 1019 Query: 1014 DGSGTVDVTVYGELAEPNKAFFKEDELLIVQGKVSEDRFNGGLRISAEKVMDIGAARIQY 1073 DGSGT++VT++ EL + + FKEDE L V GKVSEDRF+GGLR++A+ +DI +R+ + Sbjct: 1020 DGSGTIEVTIFSELMDQKRPIFKEDEFLAVFGKVSEDRFSGGLRLNADDALDISGSRLHF 1079 Query: 1074 GQRVVVSLNKSVDPVHLRDTLSSYRQPQGLPFVMKYVQSGVGCEVMLGDAWRVVPSDGLQ 1133 GQ + +L + + L++T++ ++ G+ + Y+ G C + G + P+D Sbjct: 1080 GQHISFTLPEKFNLAKLKETITPWQTEDGMQLIADYIVDGNKCRIDFGANCLLGPNDECL 1139 Query: 1134 VSLRESFGQEAVV 1146 SL + F V Sbjct: 1140 NSLSQQFKDAKVT 1152