BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0051.p         (197 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B7QPV6.1 B7QPV6_9RHOB Transcriptional regulator, XRE family with...   108   4e-22
A9DEU4.1 A9DEU4_9RHIZ Transcriptional regulator, XRE family with...   105   3e-21
A0LHE5.1 A0LHE5_SYNFM Transcriptional regulator, XRE family           103   1e-20
Q28QP9.1 Q28QP9_JANSC Transcriptional regulator, XRE family with...   102   4e-20
E3EYB0.1 E3EYB0_KETVY Transcriptional regulator, XRE family with...   101   5e-20

>B7QPV6.1 B7QPV6_9RHOB Transcriptional regulator, XRE family with cupin
           sensor
          Length = 204

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 9/180 (5%)

Query: 4   QIGSRIRECRRAKNITLQVLSDETALSTGFLSKLERGEASASIANLISISKYLGLSLQDL 63
           ++G  IR+ R+  N+TLQ L D + +S G+LS++ER  A+ S+  L  I+  L + L D 
Sbjct: 11  KVGPTIRKRRKQLNMTLQALCDASGVSVGYLSQVERDNATPSLGTLAQIAAALEVGL-DY 69

Query: 64  FQTSTEAAPPPPDYVLSKAKARNDEAPLSAAGYTFHRSCGDLPGQQLAAFELEFPANQEN 123
           F ++++     P   L++A +R   A L  +   +     + PG +++++ L  PA   +
Sbjct: 70  FISASK-----PSDGLTRAGSRPLFA-LDNSSLRYEALGAEFPGSEMSSYVLHIPAGYTS 123

Query: 124 QPVLVSHEGEEVLYMLDGKLEFHIGDDVLILERGDCLHFNCEKPHMGRNIGAKTARLMMV 183
           +   VSHEGEE++Y+LDG++E  +GD    +  GDCLH+  + PH  RN   +TAR++  
Sbjct: 124 E--TVSHEGEEIIYVLDGEIEQTLGDQTFRMTVGDCLHYRGDTPHAWRNPTDQTARILWT 181


>A9DEU4.1 A9DEU4_9RHIZ Transcriptional regulator, XRE family with cupin
           sensor
          Length = 203

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 100/184 (54%), Gaps = 15/184 (8%)

Query: 6   GSRIRECRRAKNITLQVLSDETALSTGFLSKLERGEASASIANLISISKYLGLSLQDLFQ 65
           G RIRE R    +TLQ L+D++ +S GFLS++ER +A+ S+  L S++  LG+ + D+F 
Sbjct: 23  GERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDV-DVFI 81

Query: 66  TSTEAAPPPPDYVLSKAKARNDEAP---LSAAGYTFHRSCGDLPGQQLAAFELEFPANQE 122
           ++    P P D V      R  E P   L+ +   + R    LPG  L++  +  P    
Sbjct: 82  ST----PKPADSV-----TREGERPSFVLADSSLQYERISTVLPGGTLSSLIVHIPVGYA 132

Query: 123 NQPVLVSHEGEEVLYMLDGKLEFHIGDDVLILERGDCLHFNCEKPHMGRNIGAKTARLMM 182
           ++  + +H GEE++ +LDG +   +GD   +L  GD LHF  + PH   N+G   ARL+ 
Sbjct: 133 SE--ITAHVGEELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLW 190

Query: 183 VVSS 186
             +S
Sbjct: 191 TGTS 194


>A0LHE5.1 A0LHE5_SYNFM Transcriptional regulator, XRE family
          Length = 204

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 5/186 (2%)

Query: 2   AIQIGSRIRECRRAKNITLQVLSDETALSTGFLSKLERGEASASIANLISISKYLGLSLQ 61
           A  IG+++RE R+  ++TLQ L+ +T LS  FLS++E  +    +A L  +++ L ++L 
Sbjct: 15  AFNIGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALG 74

Query: 62  DLFQTSTEAAPPPPDYVLSKAKARNDEAPLSAAG---YTFHRSCGDLPGQQLAAFELEFP 118
             FQ S E           K + R D  P    G   Y +         + +  F +EFP
Sbjct: 75  HFFQESVEDDRIA--ITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEFP 132

Query: 119 ANQENQPVLVSHEGEEVLYMLDGKLEFHIGDDVLILERGDCLHFNCEKPHMGRNIGAKTA 178
             ++ + V +SHEGEE LY+++G++EF   D V  L+ GD ++   E  H  R +G +TA
Sbjct: 133 TQEKEEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETA 192

Query: 179 RLMMVV 184
           R + VV
Sbjct: 193 RALAVV 198


>Q28QP9.1 Q28QP9_JANSC Transcriptional regulator, XRE family with cupin
           sensor
          Length = 205

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 9/179 (5%)

Query: 5   IGSRIRECRRAKNITLQVLSDETALSTGFLSKLERGEASASIANLISISKYLGLSLQDLF 64
           +G+ IR+ R+  ++TLQ L D+  LS G+LS++ERG+A+ S+  L  I++ L + L+   
Sbjct: 12  LGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSVELEYFI 71

Query: 65  QTSTEAAPPPPDYVLSKAKARNDEAPLSAAGYTFHRSCGDLPGQQLAAFELEFPANQENQ 124
            T      P P   LS+  AR  +  +  +   +     D PG +L+ + L  P    ++
Sbjct: 72  AT------PKPADSLSRGGAR-PQFSIDGSSILYESVGADFPGAELSCYILHVPPGYASE 124

Query: 125 PVLVSHEGEEVLYMLDGKLEFHIGDDVLILERGDCLHFNCEKPHMGRNIGAKTARLMMV 183
             +V HEGEE++++L G++   +G    IL++GD LH++   PH   N    T R++  
Sbjct: 125 --VVHHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWT 181


>E3EYB0.1 E3EYB0_KETVY Transcriptional regulator, XRE family with cupin
           sensor
          Length = 214

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 88/178 (49%), Gaps = 9/178 (5%)

Query: 6   GSRIRECRRAKNITLQVLSDETALSTGFLSKLERGEASASIANLISISKYLGLSLQDLFQ 65
           GSRIRE R+   +TLQ LSD   LS GFLS+LER +A  S+ +L  +++ L + +     
Sbjct: 30  GSRIRELRKKNGLTLQQLSDRAGLSVGFLSQLERDKAVPSLGSLARLAQVLQVDIDHFIS 89

Query: 66  TSTEAAPPPPDYVLSKAKARNDEAPLSAAGYTFHRSCGDLPGQQLAAFELEFPANQENQP 125
           T      P P   LS+A  R D          + R    +PG  L    +  P     + 
Sbjct: 90  T------PRPSDSLSRAAGR-DSFGTGPGRARYERVTTVMPGSNLTGIIIHMPPGCRLE- 141

Query: 126 VLVSHEGEEVLYMLDGKLEFHIGDDVLILERGDCLHFNCEKPHMGRNIGAKTARLMMV 183
              SH GEE + ML+G++E  +GD  + + + D LHF  + PH  R IG   ARL+  
Sbjct: 142 -TTSHPGEEFILMLEGEIEVTLGDVTMRMVKDDALHFMGDVPHSSRTIGKAEARLLWT 198