BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0028.p (291 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8INT5.1 D8INT5_HERSS Transmembrane protein 396 e-108 A6T1Y0.1 A6T1Y0_JANMA Dinucleotide-utilizing enzymes involved in... 394 e-108 A4G885.1 A4G885_HERAR Putative uncharacterized protein 387 e-105 F1VW08.1 F1VW08_9BURK Dinucleotide-utilizing enzymes involved in... 374 e-101 D5WCC5.1 D5WCC5_BURSC UBA/THIF-type NAD/FAD binding protein 324 1e-86 >D8INT5.1 D8INT5_HERSS Transmembrane protein Length = 285 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/279 (74%), Positives = 234/279 (83%), Gaps = 8/279 (2%) Query: 14 DIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNL 73 DID++RRFGG+ARLYGA L RFR A +CVVGVGGVGSWIVEALARSAIG +T++DLDNL Sbjct: 9 DIDYERRFGGVARLYGAAALQRFRQARVCVVGVGGVGSWIVEALARSAIGHLTLVDLDNL 68 Query: 74 AESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDY 133 AESNVNRQIHALT TLG+AKVTALHERI QINP C VTE+EDF+ PDNV +M+G RFDY Sbjct: 69 AESNVNRQIHALTTTLGQAKVTALHERIRQINPTCVVTEVEDFVDPDNVEKMLGGERFDY 128 Query: 134 VVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKR 193 V+DAIDNV AKVA+IA+CR++ +P++T G AGGQIDPT+IEIRDLCRTEQEPLLAKVRKR Sbjct: 129 VIDAIDNVPAKVAMIAWCRKNGMPMVTIGSAGGQIDPTQIEIRDLCRTEQEPLLAKVRKR 188 Query: 194 LRAWHKFPRGTKNKFGIDAVFSTEPLRFP---EGEVCEV-DTDDAADGLDTVDADGRKQD 249 LRA H FPRGTKNKF IDAVFSTEPLRFP EGE CE+ +D G D D+ Sbjct: 189 LRAQHGFPRGTKNKFHIDAVFSTEPLRFPELAEGEACEIAPAEDIDVGEDAADS----TQ 244 Query: 250 AGVTGLNCAGFGSAMVVTASFGLVAAGFVLRKIVERPDA 288 AGVTGLNCAGFGSAMVVTASFGLVAA VL+K+ E+ A Sbjct: 245 AGVTGLNCAGFGSAMVVTASFGLVAAAHVLKKLAEQAAA 283 >A6T1Y0.1 A6T1Y0_JANMA Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Length = 283 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/270 (77%), Positives = 229/270 (84%), Gaps = 16/270 (5%) Query: 14 DIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNL 73 DIDFDRRFGGIARLYG+ L RFR+AH+CV+GVGGVGSW+VEALARSAIGKITMIDLDNL Sbjct: 14 DIDFDRRFGGIARLYGSAALERFRSAHVCVIGVGGVGSWVVEALARSAIGKITMIDLDNL 73 Query: 74 AESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDY 133 AESN+NRQIHALTDTLGKAKVTAL ERI QINPYC VTEIEDFL+ DN+ EMIG +DY Sbjct: 74 AESNINRQIHALTDTLGKAKVTALAERIAQINPYCVVTEIEDFLSADNLDEMIGAHHYDY 133 Query: 134 VVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKR 193 ++DAIDNVRAK ALIAYCR+H + L+T G AGGQIDPTRIE+ DLCRTEQEPLLAKVRKR Sbjct: 134 IIDAIDNVRAKTALIAYCRQHGLKLVTIGSAGGQIDPTRIEVLDLCRTEQEPLLAKVRKR 193 Query: 194 LRAWHKFPRGTKNKFGIDAVFSTEPLRFPE-GEVCEVDTDDAADGLDTVDADGRKQDAGV 252 LRA H FPRGTKNKFGIDAVFS+EPLRFPE EVC VD D + +G+ Sbjct: 194 LRAEHGFPRGTKNKFGIDAVFSSEPLRFPETAEVCAVDGD---------------EQSGI 238 Query: 253 TGLNCAGFGSAMVVTASFGLVAAGFVLRKI 282 TGLNCAGFGSAMVVTASFGLVAA VLRK+ Sbjct: 239 TGLNCAGFGSAMVVTASFGLVAAAHVLRKL 268 >A4G885.1 A4G885_HERAR Putative uncharacterized protein Length = 289 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 212/279 (75%), Positives = 230/279 (82%), Gaps = 20/279 (7%) Query: 4 LEPVVAANDADIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIG 63 L PVV +IDF+RRFGGIARLYG L RFRAAH+CVVGVGGVGSW+VEALARSAIG Sbjct: 8 LTPVVP----EIDFERRFGGIARLYGPAALTRFRAAHVCVVGVGGVGSWVVEALARSAIG 63 Query: 64 KITMIDLDNLAESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVA 123 KITMIDLDNLAESNVNRQIHALTDTLGKAKVTAL ERI QINPYC VTEIEDFL+ DN+ Sbjct: 64 KITMIDLDNLAESNVNRQIHALTDTLGKAKVTALAERIDQINPYCVVTEIEDFLSADNLD 123 Query: 124 EMIGEGRFDYVVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQ 183 EMIG +DY++DAIDNVRAK ALIAYCR+H + L+T G AGGQIDPT+I + DLCRTEQ Sbjct: 124 EMIGAHHYDYIIDAIDNVRAKTALIAYCRKHGLKLVTIGSAGGQIDPTKIAVLDLCRTEQ 183 Query: 184 EPLLAKVRKRLRAWHKFPRGTKNKFGIDAVFSTEPLRFPEG-EVCEVDTDDAADGLDTVD 242 EPLLAKVRKRLRA H FPRGTKNKFGIDAVFSTEPLRFPE E C++D+D Sbjct: 184 EPLLAKVRKRLRAEHGFPRGTKNKFGIDAVFSTEPLRFPESEEACDIDSD---------- 233 Query: 243 ADGRKQDAGVTGLNCAGFGSAMVVTASFGLVAAGFVLRK 281 AG+TGLNCAGFGSAMVVTASFGLVAA VLRK Sbjct: 234 -----TPAGITGLNCAGFGSAMVVTASFGLVAAAHVLRK 267 >F1VW08.1 F1VW08_9BURK Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Length = 273 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 197/270 (72%), Positives = 225/270 (83%), Gaps = 15/270 (5%) Query: 14 DIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNL 73 +IDF+RRFGGIARLYGA LARFRAAH+CV+GVGGVGSWIVEALARSAIG+ITMIDLDNL Sbjct: 14 EIDFERRFGGIARLYGAPALARFRAAHVCVIGVGGVGSWIVEALARSAIGQITMIDLDNL 73 Query: 74 AESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDY 133 AESNVNRQIHALT T+G+AKVTAL ERI QINP+C+V +IE+F+ DN+ MIG +DY Sbjct: 74 AESNVNRQIHALTATMGQAKVTALAERIAQINPFCRVNQIEEFIDADNLDAMIGSRGYDY 133 Query: 134 VVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKR 193 +VDAIDNVRAK ALIAYCR HK+ L+T GGAGGQ+DPT+IE+RDLCRTEQEPLLAKVRKR Sbjct: 134 IVDAIDNVRAKTALIAYCRTHKLRLITIGGAGGQVDPTKIEVRDLCRTEQEPLLAKVRKR 193 Query: 194 LRAWHKFPRGTKNKFGIDAVFSTEPLRFP-EGEVCEVDTDDAADGLDTVDADGRKQDAGV 252 LR+ H FPRGT+NKFGIDAVFSTE LRFP E + D+D+A AG+ Sbjct: 194 LRSEHGFPRGTRNKFGIDAVFSTEHLRFPAAAESADDDSDEAV--------------AGI 239 Query: 253 TGLNCAGFGSAMVVTASFGLVAAGFVLRKI 282 TGLNCAGFGSAMV TA+FG+VAA VL KI Sbjct: 240 TGLNCAGFGSAMVGTAAFGIVAASQVLNKI 269 >D5WCC5.1 D5WCC5_BURSC UBA/THIF-type NAD/FAD binding protein Length = 285 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 164/270 (60%), Positives = 196/270 (72%), Gaps = 8/270 (2%) Query: 16 DFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNLAE 75 D RRFGGIARLYGA LA F AH+ V+G+GGVGSW+ EALARSA+G +T+IDLDN+AE Sbjct: 21 DRARRFGGIARLYGAPALAAFEGAHVAVIGIGGVGSWVAEALARSALGTLTLIDLDNVAE 80 Query: 76 SNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDYVV 135 SN NRQIHAL GK KV A+ ERI INPYC V IEDF+ PDN A +G G FDYV+ Sbjct: 81 SNTNRQIHALDGNYGKPKVEAMAERITAINPYCDVRLIEDFVEPDNFAATLGGG-FDYVI 139 Query: 136 DAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKRLR 195 DAID+VR K ALIA+C E K PL+T GGAGGQ+DPTRI I DL T Q+PLL+KVR +LR Sbjct: 140 DAIDSVRTKTALIAWCVERKQPLITVGGAGGQLDPTRIRIDDLALTIQDPLLSKVRGQLR 199 Query: 196 AWHKFPRGTKNKFGIDAVFSTEPLRFPEGEVCEVDTDDAADGLDTVDADGRKQDAGVTGL 255 H FPRG K KF + AV+S EPL +PE VC D D+AA+ + T G GL Sbjct: 200 KQHGFPRGPKAKFKVSAVYSDEPLIYPEVAVC--DIDEAAEHVST-----SPGHTGPVGL 252 Query: 256 NCAGFGSAMVVTASFGLVAAGFVLRKIVER 285 NCAGFGS++ VTASFG AA +VLR++ ++ Sbjct: 253 NCAGFGSSVCVTASFGFAAAAYVLRELAKK 282