BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0017.p         (84 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4AC73.1 A4AC73_9GAMM 2-dehydro-3-deoxygluconokinase                   83   1e-14
B7S170.1 B7S170_9GAMM Kinase, pfkB family                              82   3e-14
E7PNR4.1 E7PNR4_PSESG 2-dehydro-3-deoxygluconokinase                   79   2e-13
D7I0I7.1 D7I0I7_PSESS 2-dehydro-3-deoxygluconate kinase EC=2.7.1.45    79   2e-13
Q48IC4.1 Q48IC4_PSE14 2-dehydro-3-deoxygluconokinase EC=2.7.1.45       79   3e-13

>A4AC73.1 A4AC73_9GAMM 2-dehydro-3-deoxygluconokinase
          Length = 318

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 57/85 (67%), Gaps = 3/85 (3%)

Query: 1   VVVKLGEQGCLVQAAGMDAAQAVTTQKVTA-IDTTAAGDSFNAAYLAARRQGASAIAAAE 59
           VVVKLG  GCL+ + G    + V T+ V+A +DTTAAGDSFNA YLAAR  G S   AAE
Sbjct: 235 VVVKLGGAGCLLGSEG--THKLVATRAVSAPVDTTAAGDSFNAGYLAARYFGKSLQEAAE 292

Query: 60  AGCALAGCVVMHPGAIMPPEAMPPL 84
            G  LAG VVM+ GAI+P E MP  
Sbjct: 293 TGNRLAGSVVMNRGAIIPLETMPEF 317


>B7S170.1 B7S170_9GAMM Kinase, pfkB family
          Length = 299

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 2/81 (2%)

Query: 1   VVVKLGEQGCLVQAAGMDAAQAVTTQKVTAIDTTAAGDSFNAAYLAARRQGASAIAAAEA 60
           + +K+GEQGCLV     D  + +  +KV  +DTT+AGDSFNA YLAAR  G +A ++AE+
Sbjct: 218 IALKMGEQGCLVVVD--DQQELIPARKVDVVDTTSAGDSFNAGYLAARLSGQAAASSAES 275

Query: 61  GCALAGCVVMHPGAIMPPEAM 81
           G  LA  V+ H GAI+P  AM
Sbjct: 276 GHQLASVVIQHKGAIIPRNAM 296


>E7PNR4.1 E7PNR4_PSESG 2-dehydro-3-deoxygluconokinase
          Length = 307

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 1   VVVKLGEQGCLVQAAGMDAAQAVTTQKVT-AIDTTAAGDSFNAAYLAARRQGASAIAAAE 59
           +VVK G Q CLV+A G      + +QKV   +DTTAAGDSF+AAYLAAR  G     AAE
Sbjct: 226 IVVKRGAQSCLVEAGG--ERFDIASQKVEHVVDTTAAGDSFSAAYLAARLMGEHPRQAAE 283

Query: 60  AGCALAGCVVMHPGAIMPPEAMP 82
           AG  LA  V+ HPGA++P   MP
Sbjct: 284 AGHRLASVVIQHPGALVPKSVMP 306


>D7I0I7.1 D7I0I7_PSESS 2-dehydro-3-deoxygluconate kinase EC=2.7.1.45
          Length = 307

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 1   VVVKLGEQGCLVQAAGMDAAQAVTTQKV-TAIDTTAAGDSFNAAYLAARRQGASAIAAAE 59
           +VVK G Q CLV+A G      + +QKV   +DTTAAGDSF+AAYLAAR  G     AAE
Sbjct: 226 IVVKRGAQSCLVEAGG--ERFDIASQKVERVVDTTAAGDSFSAAYLAARLMGEHPRQAAE 283

Query: 60  AGCALAGCVVMHPGAIMPPEAMP 82
           AG  LA  V+ HPGA++P   MP
Sbjct: 284 AGHRLASVVIQHPGALVPKSVMP 306


>Q48IC4.1 Q48IC4_PSE14 2-dehydro-3-deoxygluconokinase EC=2.7.1.45
          Length = 307

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 1   VVVKLGEQGCLVQAAGMDAAQAVTTQKVT-AIDTTAAGDSFNAAYLAARRQGASAIAAAE 59
           +VVK G Q CLV+A G      + +QKV   +DTTAAGDSF+AAYLAAR  G     AAE
Sbjct: 226 IVVKRGAQSCLVEAGG--ERFDIASQKVEHVVDTTAAGDSFSAAYLAARLMGEHPRQAAE 283

Query: 60  AGCALAGCVVMHPGAIMPPEAMP 82
           AG  LA  V+ HPGA++P   MP
Sbjct: 284 AGHRLASVVIQHPGALVPKSVMP 306