BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0005.p         (154 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q6F828.1 Q6F828_ACIAD Putative uncharacterized protein                147   5e-34
E8PBZ9.1 E8PBZ9_ACIB1 YjgF family translation initiation inhibitor    142   2e-32
B2HTD8.1 B2HTD8_ACIBC Putative translation initiation inhibitor,...   142   2e-32
B0VKN3.1 B0VKN3_ACIBS Putative uncharacterized protein                142   2e-32
F0QNY9.1 F0QNY9_ACIBD YjgF family translation initiation inhibitor    142   2e-32

>Q6F828.1 Q6F828_ACIAD Putative uncharacterized protein
          Length = 163

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 101/143 (70%)

Query: 10  LGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGARAA 69
           LG         G +Y + + H GLA++SGQ+PR  D+V V GK+G +V +  A++ A  +
Sbjct: 14  LGYDFSGDMKIGGKYTSLIEHAGLAYMSGQIPRVEDKVQVCGKVGFDVDLSQAQLAASIS 73

Query: 70  LIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGRHA 129
            +RALA L+   G LQ ++K+L++NV+++ST DF+QQS VADGAS ++YE+ G + G+H 
Sbjct: 74  TMRALAILKQHYGTLQVVEKVLQMNVFIHSTADFTQQSEVADGASEILYEILGSDTGQHT 133

Query: 130 RTSVGVAQLPRNAAVELDIVVAL 152
           RTSV V QLP+NA+VE++ +VAL
Sbjct: 134 RTSVSVCQLPKNASVEINFIVAL 156


>E8PBZ9.1 E8PBZ9_ACIB1 YjgF family translation initiation inhibitor
          Length = 157

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 97/145 (66%)

Query: 8   TELGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGAR 67
           + LG         G +Y + + H GL +ISGQ+PR GD V + GK+G +V + DA++ A 
Sbjct: 12  SRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDLSDAQLAAS 71

Query: 68  AALIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGR 127
            + +RALA L+   G L  I K+L++NV+V+ST  F QQS VADGAS ++YE+ G + GR
Sbjct: 72  ISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEILYEILGLDTGR 131

Query: 128 HARTSVGVAQLPRNAAVELDIVVAL 152
           H RTSV V QLP+NA+VE++ + AL
Sbjct: 132 HTRTSVSVYQLPKNASVEINFIFAL 156


>B2HTD8.1 B2HTD8_ACIBC Putative translation initiation inhibitor, yjgF family
          Length = 157

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 97/145 (66%)

Query: 8   TELGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGAR 67
           + LG         G +Y + + H GL +ISGQ+PR GD V + GK+G +V + DA++ A 
Sbjct: 12  SRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDLSDAQLAAS 71

Query: 68  AALIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGR 127
            + +RALA L+   G L  I K+L++NV+V+ST  F QQS VADGAS ++YE+ G + GR
Sbjct: 72  ISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEILYEILGLDTGR 131

Query: 128 HARTSVGVAQLPRNAAVELDIVVAL 152
           H RTSV V QLP+NA+VE++ + AL
Sbjct: 132 HTRTSVSVYQLPKNASVEINFIFAL 156


>B0VKN3.1 B0VKN3_ACIBS Putative uncharacterized protein
          Length = 157

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 97/145 (66%)

Query: 8   TELGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGAR 67
           + LG         G +Y + + H GL +ISGQ+PR GD V + GK+G +V + DA++ A 
Sbjct: 12  SRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDLSDAQLAAS 71

Query: 68  AALIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGR 127
            + +RALA L+   G L  I K+L++NV+V+ST  F QQS VADGAS ++YE+ G + GR
Sbjct: 72  ISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEILYEILGLDTGR 131

Query: 128 HARTSVGVAQLPRNAAVELDIVVAL 152
           H RTSV V QLP+NA+VE++ + AL
Sbjct: 132 HTRTSVSVYQLPKNASVEINFIFAL 156


>F0QNY9.1 F0QNY9_ACIBD YjgF family translation initiation inhibitor
          Length = 157

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 97/145 (66%)

Query: 8   TELGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGAR 67
           + LG         G +Y + + H GL +ISGQ+PR GD V + GK+G +V + DA++ A 
Sbjct: 12  SRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDLSDAQLAAS 71

Query: 68  AALIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGR 127
            + +RALA L+   G L  I K+L++NV+V+ST  F QQS VADGAS ++YE+ G + GR
Sbjct: 72  ISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEILYEILGLDTGR 131

Query: 128 HARTSVGVAQLPRNAAVELDIVVAL 152
           H RTSV V QLP+NA+VE++ + AL
Sbjct: 132 HTRTSVSVYQLPKNASVEINFIFAL 156