BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0003.p (283 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRS8.1 D8IRS8_HERSS ABC-type sn-glycerol-3-phosphate transport... 484 e-135 A9IM32.1 A9IM32_BORPD sn-Glycerol-3-phosphate transport system p... 407 e-111 Q7WID7.1 Q7WID7_BORBR sn-glycerol-3-phosphate transport system p... 406 e-111 Q7W6G6.1 Q7W6G6_BORPA sn-glycerol-3-phosphate transport system p... 406 e-111 Q7VYN3.1 Q7VYN3_BORPE sn-glycerol-3-phosphate transport system p... 406 e-111 >D8IRS8.1 D8IRS8_HERSS ABC-type sn-glycerol-3-phosphate transport system, permease component protein Length = 283 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 244/283 (86%), Positives = 266/283 (93%) Query: 1 MIERRPILDAVSHLVLIIGAIIVIFPLYVAFIASTQTAEQSAMSPLSLLPGTELVANYKT 60 MIERRPILD +SH+VL++G +IV FPLYVAF+ASTQ+AEQSA+SPLSL PG E + NY T Sbjct: 1 MIERRPILDFLSHVVLVLGVLIVFFPLYVAFVASTQSAEQSALSPLSLAPGGEFMNNYST 60 Query: 61 VLTQGASGNVSSPPVSRMLWISLVTALVIAIGKISISMLSAFAMVYFRFRGRNLFFWMIF 120 VL +GA+G V++PPV MLW+SL TAL+IAIGKISISMLSAFA+VYFRF GR LFFWMIF Sbjct: 61 VLFKGAAGQVTAPPVLHMLWVSLATALIIAIGKISISMLSAFAIVYFRFPGRGLFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDFGMLNTYAGLTVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRITPTYQVVSD GMLN+YAGL+VPLIASATATFLFRQFFLTVPDELAEAAR Sbjct: 121 VTLMLPVEVRITPTYQVVSDLGMLNSYAGLSVPLIASATATFLFRQFFLTVPDELAEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLMIATEQTMYPIGIGIKTLI 240 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPL+IAT+ +MYPIGIGIKTLI Sbjct: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLIIATDTSMYPIGIGIKTLI 240 Query: 241 SGGDSAVEWNMVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDSAVEWN+VMATMILAMLPPGLVVVVMQKWFVKGLVDSEK Sbjct: 241 SGGDSAVEWNLVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 >A9IM32.1 A9IM32_BORPD sn-Glycerol-3-phosphate transport system permease protein Length = 275 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/283 (69%), Positives = 234/283 (82%), Gaps = 8/283 (2%) Query: 1 MIERRPILDAVSHLVLIIGAIIVIFPLYVAFIASTQTAEQSAMSPLSLLPGTELVANYKT 60 M+ERRP LD ++HL+L+ G +V FPLYV F+ASTQTA++ A +P+SLLPG V NY Sbjct: 1 MVERRPWLDILAHLILLCGVALVAFPLYVTFVASTQTAQEVAAAPMSLLPGPHFVDNYAR 60 Query: 61 VLTQGASGNVSSPPVSRMLWISLVTALVIAIGKISISMLSAFAMVYFRFRGRNLFFWMIF 120 L G RML++SL+ ALVI++GKI+IS+LSAFA+VYFRF GR FFWMIF Sbjct: 61 ALASAGVG--------RMLYVSLIMALVISLGKIAISLLSAFAVVYFRFPGRMFFFWMIF 112 Query: 121 VTLMLPVEVRITPTYQVVSDFGMLNTYAGLTVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRI PTY+VV+D G+LN+YAGLT+PLIASATATFLFRQFFLTVPDEL EAAR Sbjct: 113 VTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATATFLFRQFFLTVPDELVEAAR 172 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLMIATEQTMYPIGIGIKTLI 240 IDGAGPLRF +DVL PLSRT++ ALFVI FIYGWNQYLWPL+I T++ MYP+ IGIK +I Sbjct: 173 IDGAGPLRFFRDVLLPLSRTSIAALFVIQFIYGWNQYLWPLLITTQENMYPVVIGIKRMI 232 Query: 241 SGGDSAVEWNMVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDS EWN+ MAT +LAM+PP LVV++MQKWFVKGLVD+EK Sbjct: 233 SGGDSVTEWNITMATAMLAMVPPALVVILMQKWFVKGLVDTEK 275 >Q7WID7.1 Q7WID7_BORBR sn-glycerol-3-phosphate transport system permease protein Length = 283 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/283 (68%), Positives = 236/283 (83%) Query: 1 MIERRPILDAVSHLVLIIGAIIVIFPLYVAFIASTQTAEQSAMSPLSLLPGTELVANYKT 60 M+ERRP LD ++H +L+ G +V FP+YV F+ASTQTA++ A +P+SL+PG V NY Sbjct: 1 MVERRPWLDILAHFILLCGVALVAFPIYVTFVASTQTAQEVASAPMSLIPGKHFVDNYMQ 60 Query: 61 VLTQGASGNVSSPPVSRMLWISLVTALVIAIGKISISMLSAFAMVYFRFRGRNLFFWMIF 120 L G+ G PV RM+++SL+ AL I++GKI+IS+LSAFA+VYFRF GR FFWMIF Sbjct: 61 ALFAGSGGGSYGAPVGRMMYVSLIMALAISLGKIAISLLSAFAVVYFRFPGRMFFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDFGMLNTYAGLTVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRI PTY+VV+D G+LN+YAGLT+PLIASATATFLFRQFFLTVPDEL EAAR Sbjct: 121 VTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATATFLFRQFFLTVPDELVEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLMIATEQTMYPIGIGIKTLI 240 IDGAGP+RF +DVL PLSRT++ ALFVI FIYGWNQYLWPL+I T++ MYP+ IGIK +I Sbjct: 181 IDGAGPMRFFRDVLLPLSRTSIAALFVIQFIYGWNQYLWPLLITTQEDMYPVVIGIKRMI 240 Query: 241 SGGDSAVEWNMVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDS EWN+ MAT ILAM+PP LVV++MQKWFVKGLVD+EK Sbjct: 241 SGGDSVTEWNITMATAILAMIPPALVVILMQKWFVKGLVDTEK 283 >Q7W6G6.1 Q7W6G6_BORPA sn-glycerol-3-phosphate transport system permease protein Length = 283 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/283 (68%), Positives = 236/283 (83%) Query: 1 MIERRPILDAVSHLVLIIGAIIVIFPLYVAFIASTQTAEQSAMSPLSLLPGTELVANYKT 60 M+ERRP LD ++H +L+ G +V FP+YV F+ASTQTA++ A +P+SL+PG V NY Sbjct: 1 MVERRPWLDILAHFILLCGVALVAFPIYVTFVASTQTAQEVASAPMSLIPGKHFVDNYMQ 60 Query: 61 VLTQGASGNVSSPPVSRMLWISLVTALVIAIGKISISMLSAFAMVYFRFRGRNLFFWMIF 120 L G+ G PV RM+++SL+ AL I++GKI+IS+LSAFA+VYFRF GR FFWMIF Sbjct: 61 ALFAGSGGGSYGAPVGRMMYVSLIMALAISLGKIAISLLSAFAVVYFRFPGRMFFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDFGMLNTYAGLTVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRI PTY+VV+D G+LN+YAGLT+PLIASATATFLFRQFFLTVPDEL EAAR Sbjct: 121 VTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATATFLFRQFFLTVPDELVEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLMIATEQTMYPIGIGIKTLI 240 IDGAGP+RF +DVL PLSRT++ ALFVI FIYGWNQYLWPL+I T++ MYP+ IGIK +I Sbjct: 181 IDGAGPMRFFRDVLLPLSRTSIAALFVIQFIYGWNQYLWPLLITTQEDMYPVVIGIKRMI 240 Query: 241 SGGDSAVEWNMVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDS EWN+ MAT ILAM+PP LVV++MQKWFVKGLVD+EK Sbjct: 241 SGGDSVTEWNITMATAILAMIPPALVVILMQKWFVKGLVDTEK 283 >Q7VYN3.1 Q7VYN3_BORPE sn-glycerol-3-phosphate transport system permease protein Length = 283 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/283 (68%), Positives = 236/283 (83%) Query: 1 MIERRPILDAVSHLVLIIGAIIVIFPLYVAFIASTQTAEQSAMSPLSLLPGTELVANYKT 60 M+ERRP LD ++H +L+ G +V FP+YV F+ASTQTA++ A +P+SL+PG V NY Sbjct: 1 MVERRPWLDILAHFILLCGVALVAFPIYVTFVASTQTAQEVASAPMSLIPGKHFVDNYMQ 60 Query: 61 VLTQGASGNVSSPPVSRMLWISLVTALVIAIGKISISMLSAFAMVYFRFRGRNLFFWMIF 120 L G+ G PV RM+++SL+ AL I++GKI+IS+LSAFA+VYFRF GR FFWMIF Sbjct: 61 ALFAGSGGGSYGAPVGRMMYVSLIMALAISLGKIAISLLSAFAVVYFRFPGRMFFFWMIF 120 Query: 121 VTLMLPVEVRITPTYQVVSDFGMLNTYAGLTVPLIASATATFLFRQFFLTVPDELAEAAR 180 VTLMLPVEVRI PTY+VV+D G+LN+YAGLT+PLIASATATFLFRQFFLTVPDEL EAAR Sbjct: 121 VTLMLPVEVRIAPTYKVVADLGLLNSYAGLTLPLIASATATFLFRQFFLTVPDELVEAAR 180 Query: 181 IDGAGPLRFLKDVLWPLSRTNVIALFVIMFIYGWNQYLWPLMIATEQTMYPIGIGIKTLI 240 IDGAGP+RF +DVL PLSRT++ ALFVI FIYGWNQYLWPL+I T++ MYP+ IGIK +I Sbjct: 181 IDGAGPMRFFRDVLLPLSRTSIAALFVIQFIYGWNQYLWPLLITTQEDMYPVVIGIKRMI 240 Query: 241 SGGDSAVEWNMVMATMILAMLPPGLVVVVMQKWFVKGLVDSEK 283 SGGDS EWN+ MAT ILAM+PP LVV++MQKWFVKGLVD+EK Sbjct: 241 SGGDSVTEWNITMATAILAMIPPALVVILMQKWFVKGLVDTEK 283