BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0737.p         (44 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IVJ9.1 D8IVJ9_HERSS 50S ribosomal protein L34                        84   6e-15
F1VVH6.1 F1VVH6_9BURK LSU ribosomal protein L34p                       82   2e-14
C3XC40.1 C3XC40_OXAFO 50S ribosomal protein L34                        82   3e-14
A6T4E0.1 RL34_JANMA 50S ribosomal protein L34                          82   3e-14
A4GAN6.1 RL34_HERAR 50S ribosomal protein L34                          82   3e-14

>D8IVJ9.1 D8IVJ9_HERSS 50S ribosomal protein L34
          Length = 45

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/44 (100%), Positives = 44/44 (100%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44


>F1VVH6.1 F1VVH6_9BURK LSU ribosomal protein L34p
          Length = 44

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 44/44 (100%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFRARMATRGGRAV+NARR+KGRKRLAA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVLNARRSKGRKRLAA 44


>C3XC40.1 C3XC40_OXAFO 50S ribosomal protein L34
          Length = 51

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 43/44 (97%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFRARMAT+GGRAV+NARRAKGRKRLA 
Sbjct: 8  MKRTYQPSVVRRKRTHGFRARMATKGGRAVLNARRAKGRKRLAV 51


>A6T4E0.1 RL34_JANMA 50S ribosomal protein L34
          Length = 44

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 43/44 (97%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFR RMATRGGRAV+NARRAKGRKRLAA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRVRMATRGGRAVLNARRAKGRKRLAA 44


>A4GAN6.1 RL34_HERAR 50S ribosomal protein L34
          Length = 44

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 43/44 (97%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFR RMATRGGRAV+NARRAKGRKRLAA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRVRMATRGGRAVLNARRAKGRKRLAA 44