BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0725.p (265 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUR3.1 D8IUR3_HERSS ABC-type amino acid transport system, perm... 419 e-115 C1DA93.1 C1DA93_LARHH Amino acid ABC transporter, permease prote... 334 1e-89 B9Z0S4.1 B9Z0S4_9NEIS Polar amino acid ABC transporter, inner me... 317 2e-84 D8ITV3.1 D8ITV3_HERSS ABC-type glutamine transport system, perme... 313 2e-83 Q12A00.1 Q12A00_POLSJ Amino acid ABC transporter membrane protei... 306 1e-81 >D8IUR3.1 D8IUR3_HERSS ABC-type amino acid transport system, permease component protein Length = 247 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/247 (81%), Positives = 228/247 (92%) Query: 19 MDFRWSIIEGYAPLFIKGFFMTLEVAVISIVAGTVMGLLLGMLRLADVQHGVWKYLLRVT 78 MDFRWSII+GYAPLF KG MTL+V++ISI+ GTV+GLL+GMLRLA+VQHG WK+ L+ Sbjct: 1 MDFRWSIIQGYAPLFAKGVLMTLQVSLISILIGTVIGLLVGMLRLAEVQHGPWKWPLKSM 60 Query: 79 KWIASFYVAFFRGTPLFVQILLIHFAVMPVLIHQDNGLLISGELARTIKQDYGAFVSGIV 138 +W+A FYVAFFRGTPLFVQI+LIHFAVMPVL+ Q++GLLI+GELARTIKQDYGAF+SG V Sbjct: 61 RWLAGFYVAFFRGTPLFVQIMLIHFAVMPVLVQQEHGLLITGELARTIKQDYGAFLSGTV 120 Query: 139 ALSLNAAAYISEIFRAGIQSIDRGQSYAASSLGMGYRLRMRYIILPQAFRRMLPPLGNEA 198 ALSLNA AYISEIFRAGIQSI+RGQSYAA+SLGM Y L MRY++LPQAFRRMLPPLGNEA Sbjct: 121 ALSLNAGAYISEIFRAGIQSIERGQSYAAASLGMNYGLTMRYVVLPQAFRRMLPPLGNEA 180 Query: 199 ITLLKDSSLVSTIGLAELAYAARTVAGSYSRYWEPYITISVVYFSMTICLAMLVARLEKK 258 ITLLKDSSLVS IGLAELAYAARTVAG+Y+RYWEPYITISV+YFSMTICLA++VARLE K Sbjct: 181 ITLLKDSSLVSAIGLAELAYAARTVAGTYARYWEPYITISVLYFSMTICLALVVARLESK 240 Query: 259 YSAPSRH 265 YSAP R Sbjct: 241 YSAPHRR 247 >C1DA93.1 C1DA93_LARHH Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Length = 247 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 165/247 (66%), Positives = 202/247 (81%), Gaps = 1/247 (0%) Query: 19 MDFRWSIIEGYAPLFIKGFFMTLEVAVISIVAGTVMGLLLGMLRLADVQHGVWKYLLR-V 77 MDFR+S+I YAPLFI G MTL + VI++V GT++GL +GM RLAD +HG+ KYLLR Sbjct: 1 MDFRFSMIVEYAPLFIDGVKMTLGITVIAVVLGTLIGLFMGMARLADARHGMGKYLLRYC 60 Query: 78 TKWIASFYVAFFRGTPLFVQILLIHFAVMPVLIHQDNGLLISGELARTIKQDYGAFVSGI 137 KW A+ YV FFRGTPLFVQILL+HFA+MP L+H +G+LISG+LAR I+Q+YGAF SG+ Sbjct: 61 VKWPATAYVTFFRGTPLFVQILLVHFALMPTLVHPVDGILISGDLAREIRQNYGAFFSGL 120 Query: 138 VALSLNAAAYISEIFRAGIQSIDRGQSYAASSLGMGYRLRMRYIILPQAFRRMLPPLGNE 197 +AL+LNA AYI+EIFRAGI SID+GQ AA SLGM Y MR++++PQAFRRMLPPLGNE Sbjct: 121 LALTLNAGAYITEIFRAGILSIDKGQMEAARSLGMSYGQAMRFVVVPQAFRRMLPPLGNE 180 Query: 198 AITLLKDSSLVSTIGLAELAYAARTVAGSYSRYWEPYITISVVYFSMTICLAMLVARLEK 257 AI LLKDSSLVS IGLAELA+AARTVAG YSRYWEPY+TIS +Y ++T+ +A +A LEK Sbjct: 181 AIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEPYLTISFMYLALTMLMAWGIAALEK 240 Query: 258 KYSAPSR 264 +Y S Sbjct: 241 RYRVASH 247 >B9Z0S4.1 B9Z0S4_9NEIS Polar amino acid ABC transporter, inner membrane subunit Length = 247 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 152/247 (61%), Positives = 202/247 (81%), Gaps = 1/247 (0%) Query: 19 MDFRWSIIEGYAPLFIKGFFMTLEVAVISIVAGTVMGLLLGMLRLADVQHGVWKYLLR-V 77 M+FRW +I Y PLFI G MTL + +++++ GT++GL +G+ RLA+ +HG+ K +LR + Sbjct: 1 MNFRWEMITEYLPLFIDGAKMTLLITIVAVIFGTLIGLFMGVARLAEGKHGISKIVLRYL 60 Query: 78 TKWIASFYVAFFRGTPLFVQILLIHFAVMPVLIHQDNGLLISGELARTIKQDYGAFVSGI 137 + A+ YV FFRGTPLFVQILL+HFA+MP+LIH +G+++SG++AR I+Q+YGAF+SG+ Sbjct: 61 VRLPATAYVTFFRGTPLFVQILLVHFALMPMLIHPVDGIILSGDIAREIRQNYGAFISGL 120 Query: 138 VALSLNAAAYISEIFRAGIQSIDRGQSYAASSLGMGYRLRMRYIILPQAFRRMLPPLGNE 197 +AL+LNA AYI+EIFRAGIQSID+GQ AA SLG+ Y M+ +I+PQAFRRMLPPLGNE Sbjct: 121 LALTLNAGAYITEIFRAGIQSIDKGQMEAARSLGLSYGQAMKAVIVPQAFRRMLPPLGNE 180 Query: 198 AITLLKDSSLVSTIGLAELAYAARTVAGSYSRYWEPYITISVVYFSMTICLAMLVARLEK 257 AI LLKDSSLVS IGLAELA+AARTVAG YSRYWEPY+TIS +Y ++T+ +A + RLEK Sbjct: 181 AIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEPYLTISFLYLALTMLMAWGIGRLEK 240 Query: 258 KYSAPSR 264 ++ SR Sbjct: 241 RFQIASR 247 >D8ITV3.1 D8ITV3_HERSS ABC-type glutamine transport system, permease component protein Length = 250 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 150/240 (62%), Positives = 193/240 (80%), Gaps = 1/240 (0%) Query: 21 FRWSIIEGYAPLFIKGFFMTLEVAVISIVAGTVMGLLLGMLRLADVQHGVWKYLL-RVTK 79 F+W II Y PLF++G +MTL+ A+I ++AGT GL+LG+ RLA+ +HG WKY L + Sbjct: 5 FQWEIIGEYLPLFVEGTWMTLKAAIICVIAGTCWGLVLGVGRLAEARHGFWKYFLCYCVQ 64 Query: 80 WIASFYVAFFRGTPLFVQILLIHFAVMPVLIHQDNGLLISGELARTIKQDYGAFVSGIVA 139 W FYV+F RGTPLFVQILLIHFA+MP+LI+ GL++SG+LAR I+ YGAF S ++A Sbjct: 65 WPIRFYVSFLRGTPLFVQILLIHFALMPMLINPSGGLILSGDLAREIRSHYGAFASAVLA 124 Query: 140 LSLNAAAYISEIFRAGIQSIDRGQSYAASSLGMGYRLRMRYIILPQAFRRMLPPLGNEAI 199 ++LN+ AY+SEIFRAGIQSIDRGQS A+ SLGM Y +R ++LPQAFRRMLPPLGN AI Sbjct: 125 ITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMSYLATLRRVVLPQAFRRMLPPLGNNAI 184 Query: 200 TLLKDSSLVSTIGLAELAYAARTVAGSYSRYWEPYITISVVYFSMTICLAMLVARLEKKY 259 ++KDSSL S IGLAELAYAARTV+G+Y+RYWEPY+TISV+Y+ +T+ L+ LV LE +Y Sbjct: 185 AIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISVIYWLITLALSALVRHLEARY 244 >Q12A00.1 Q12A00_POLSJ Amino acid ABC transporter membrane protein, PAAT family Length = 255 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 155/240 (64%), Positives = 192/240 (80%), Gaps = 1/240 (0%) Query: 21 FRWSIIEGYAPLFIKGFFMTLEVAVISIVAGTVMGLLLGMLRLADVQHGVWKYLLR-VTK 79 FR II YA LF +G MT+ V +I IV GT +GL +GM RLA +H + L + + Sbjct: 10 FRADIISEYAVLFWRGLQMTITVTLICIVQGTALGLAIGMARLAQARHAPARQLCQYALR 69 Query: 80 WIASFYVAFFRGTPLFVQILLIHFAVMPVLIHQDNGLLISGELARTIKQDYGAFVSGIVA 139 W ++ YV+FFRGTPLFVQILLIHFAV+P+ I+ +GLLISGE AR IKQ+YGAF+SGIVA Sbjct: 70 WPSTVYVSFFRGTPLFVQILLIHFAVLPLFINPADGLLISGETARNIKQNYGAFLSGIVA 129 Query: 140 LSLNAAAYISEIFRAGIQSIDRGQSYAASSLGMGYRLRMRYIILPQAFRRMLPPLGNEAI 199 L+LNA AYISEIFRAGIQSID+GQ A+ SLGM + M +++LPQAFRRMLPPLGN AI Sbjct: 130 LTLNAGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHVVLPQAFRRMLPPLGNNAI 189 Query: 200 TLLKDSSLVSTIGLAELAYAARTVAGSYSRYWEPYITISVVYFSMTICLAMLVARLEKKY 259 +LLKDSSL+S IGLAELAYAARTVAG+YSRYWEPY+TIS++Y+ +T+ LA +V +LE +Y Sbjct: 190 SLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVVKKLEARY 249