BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0668.p         (160 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1VX61.1 F1VX61_9BURK Periplasmic thiol:disulfide oxidoreductase...   192   1e-47
D8IUL3.1 D8IUL3_HERSS Transmembrane disulfide bond formation B o...   174   5e-42
A6SUF5.1 A6SUF5_JANMA Disulfide bond formation protein                154   4e-36
A4G1N1.1 DSBB_HERAR Disulfide bond formation protein B                151   4e-35
B3R2F6.1 B3R2F6_CUPTR Disulfide bond formation protein                135   2e-30

>F1VX61.1 F1VX61_9BURK Periplasmic thiol:disulfide oxidoreductase DsbB,
           required for DsbA reoxidation
          Length = 158

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/156 (64%), Positives = 118/156 (75%), Gaps = 1/156 (0%)

Query: 1   MKSSKSLFLSVALLCVALLGVALYLQIVEEMMPCPLCIIQRYIFVAIAIICIIFAFLPPG 60
           MK+SK + L VAL   ALLGVALYLQ+VE M PCPLCIIQRY F A+A+IC+IFAFLP G
Sbjct: 1   MKNSKPILLCVALASFALLGVALYLQVVERMQPCPLCIIQRYAFAAVALICLIFAFLPRG 60

Query: 61  SAKLGAGLGALAALGGIATAGWHLWVQAHPGTSCGIDPLETSLNTIPTATLFPTLFKADG 120
           ++  GAG  AL AL G  TAGWHLWV+AHP  SCGIDPLET+LNT+  A   P +FKADG
Sbjct: 61  ASATGAGFAALVALAGAGTAGWHLWVKAHPEISCGIDPLETALNTLAPANWLPLVFKADG 120

Query: 121 LCANPY-PFLGLSIPQWSLIWFAIIAIVLVRRIVKR 155
            C+ PY P LGLSIPQWSL+WF    ++L R  +KR
Sbjct: 121 FCSTPYAPILGLSIPQWSLVWFVGFVLILGRIALKR 156


>D8IUL3.1 D8IUL3_HERSS Transmembrane disulfide bond formation B
           oxidoreductase protein
          Length = 164

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/156 (61%), Positives = 122/156 (78%), Gaps = 1/156 (0%)

Query: 1   MKSSKSLFLSVALLCVALLGVALYLQIVEEMMPCPLCIIQRYIFVAIAIICIIFAFLPPG 60
           MKSSK +FL VAL+C+ALLG A+YLQIVEEM PCPLC+IQRY+FV +A   +I AFLP  
Sbjct: 1   MKSSKPVFLLVALVCIALLGFAMYLQIVEEMQPCPLCVIQRYMFVLVAAFALIGAFLPEA 60

Query: 61  SAKLGAGLGALAALGGIATAGWHLWVQAHPGTSCGIDPLETSLNTIPTATLFPTLFKADG 120
           + +  A L ALAALGG  TA WHL+V+AHPG SC  DPLET+LN +PTA L+P +F ADG
Sbjct: 61  ARRASAALAALAALGGAGTAIWHLYVKAHPGVSCTTDPLETALNQLPTAKLWPQMFTADG 120

Query: 121 LCANPY-PFLGLSIPQWSLIWFAIIAIVLVRRIVKR 155
            C+ P+ P  GL IP WSLIWFA++A+VL+ ++++R
Sbjct: 121 FCSAPWPPVFGLQIPTWSLIWFAVLALVLIVQMLRR 156


>A6SUF5.1 A6SUF5_JANMA Disulfide bond formation protein
          Length = 157

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/156 (61%), Positives = 121/156 (77%), Gaps = 1/156 (0%)

Query: 1   MKSSKSLFLSVALLCVALLGVALYLQIVEEMMPCPLCIIQRYIFVAIAIICIIFAFLPPG 60
           MK+SK + L+VA + +ALL VALYLQ VE M+PCPLC+IQRY F AIAIIC+I  +LP G
Sbjct: 1   MKNSKPVLLAVAFVSLALLAVALYLQHVEGMLPCPLCVIQRYAFAAIAIICLIAVYLPRG 60

Query: 61  SAKLGAGLGALAALGGIATAGWHLWVQAHPGTSCGIDPLETSLNTIPTATLFPTLFKADG 120
           +AK+   L AL+A+ G   AGWH++++A+P  SCGIDPLETSLNTIPTA L P LF+ADG
Sbjct: 61  AAKVATALAALSAIAGAGVAGWHIYIKANPTVSCGIDPLETSLNTIPTAKLLPFLFQADG 120

Query: 121 LCANPY-PFLGLSIPQWSLIWFAIIAIVLVRRIVKR 155
           LC   Y P LGLS+PQW+L+WFA+IA  L+   VK+
Sbjct: 121 LCTTEYAPILGLSLPQWALVWFAVIATYLIYTTVKK 156


>A4G1N1.1 DSBB_HERAR Disulfide bond formation protein B
          Length = 158

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/156 (57%), Positives = 117/156 (75%), Gaps = 1/156 (0%)

Query: 1   MKSSKSLFLSVALLCVALLGVALYLQIVEEMMPCPLCIIQRYIFVAIAIICIIFAFLPPG 60
           MK+S+ +  +VAL  + LL VALYLQ VE M+PCPLC+IQRY F AIA+IC++ AF    
Sbjct: 1   MKNSRPVLFAVALASLLLLAVALYLQHVENMLPCPLCVIQRYAFAAIALICLVTAFRTEV 60

Query: 61  SAKLGAGLGALAALGGIATAGWHLWVQAHPGTSCGIDPLETSLNTIPTATLFPTLFKADG 120
           +A++GA L ALA+L G   AGWH++++AHP  SCGIDPLETSLNTIPTA L P L +ADG
Sbjct: 61  TARIGAALAALASLAGAGVAGWHIYIKAHPTVSCGIDPLETSLNTIPTAKLLPFLLQADG 120

Query: 121 LCANPY-PFLGLSIPQWSLIWFAIIAIVLVRRIVKR 155
           LC   Y P +GLSIPQW+L+WF +IA+ L+    ++
Sbjct: 121 LCTTEYAPIMGLSIPQWALVWFIVIALFLLHTAFRK 156


>B3R2F6.1 B3R2F6_CUPTR Disulfide bond formation protein
          Length = 161

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 102/154 (66%), Gaps = 2/154 (1%)

Query: 3   SSKSLFLSVALLCVALLGVALYLQIVEEMMPCPLCIIQRYIFVAIAIICIIFAFLPPGSA 62
           +S++ FL +A++  AL+GVALYLQI +   PCPLC++QR+ F+ I +  ++ A +   + 
Sbjct: 4   NSRAYFLLIAIVSFALVGVALYLQIEKGYQPCPLCVMQRFAFIGIGLFSLLAA-VAQNTR 62

Query: 63  KLGAGLGALAALGGIATAGWHLWVQAHPGTSCGIDPLETSLNTIPTATLFPTLFKADGLC 122
            L  GLG L+ + GIA A +H+ +  +P  SCGIDPLE  +N +PTA + P LF +DGLC
Sbjct: 63  SLWQGLGMLSGIAGIAVAVYHVSLLLNPKASCGIDPLENWVNALPTAKVLPQLFYSDGLC 122

Query: 123 ANPY-PFLGLSIPQWSLIWFAIIAIVLVRRIVKR 155
             P  P LGLS+P WSLIW  I+ + L   +++R
Sbjct: 123 TAPLPPVLGLSVPAWSLIWLFILTLTLAVGLIRR 156