BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0626.p         (137 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUI6.1 D8IUI6_HERSS GntR family transcription regulator protein     157   7e-37
A6STV1.1 A6STV1_JANMA Transcriptional regulator, GntR family          129   2e-28
Q127B2.1 Q127B2_POLSJ Transcriptional regulator, GntR family          117   6e-25
E6V851.1 E6V851_VARPD Transcriptional regulator, GntR family          114   5e-24
C9YEV3.1 C9YEV3_9BURK Putative uncharacterized protein                112   2e-23

>D8IUI6.1 D8IUI6_HERSS GntR family transcription regulator protein
          Length = 249

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/99 (78%), Positives = 85/99 (85%)

Query: 1   VALCECLGNTLLSDTLRDLTARTTLTAMLHQSSEQAEDSCAEHVHIVAALERGDLAAAEQ 60
           V L ECLGN+LL++TLRDLTARTTLTAMLHQSSEQAEDSC+EHV IV ALERGDL  AEQ
Sbjct: 138 VCLAECLGNSLLAETLRDLTARTTLTAMLHQSSEQAEDSCSEHVLIVEALERGDLEQAEQ 197

Query: 61  LMHDHLQHVEAGLNKAEVNDPLAPLRQALAPVSAVSAAS 99
           LMHDHLQHVE+GLN+   +DPL PLRQALA VS   AAS
Sbjct: 198 LMHDHLQHVESGLNQVRSSDPLEPLRQALASVSRQGAAS 236


>A6STV1.1 A6STV1_JANMA Transcriptional regulator, GntR family
          Length = 284

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/94 (70%), Positives = 74/94 (78%)

Query: 1   VALCECLGNTLLSDTLRDLTARTTLTAMLHQSSEQAEDSCAEHVHIVAALERGDLAAAEQ 60
           V LCECLGN LLSDTLRDLTARTTLTAML QSS QA DSC +HVHIVAALE GD+  AE+
Sbjct: 136 VCLCECLGNNLLSDTLRDLTARTTLTAMLRQSSSQAVDSCEDHVHIVAALESGDIDEAER 195

Query: 61  LMHDHLQHVEAGLNKAEVNDPLAPLRQALAPVSA 94
           LM +HLQ VE+ L +   +DPL  LR AL PV+A
Sbjct: 196 LMLEHLQVVESTLYELAPSDPLNALRTALTPVAA 229


>Q127B2.1 Q127B2_POLSJ Transcriptional regulator, GntR family
          Length = 259

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/100 (63%), Positives = 71/100 (71%), Gaps = 1/100 (1%)

Query: 1   VALCECLGNTLLSDTLRDLTARTTLTAMLHQSSEQAEDSCAEHVHIVAALERGDLAAAEQ 60
           V L ECLGN LL+DTLRD TARTTL AML+QSS  A  SC EHV IV ALE+GDL  AEQ
Sbjct: 130 VCLAECLGNNLLADTLRDFTARTTLIAMLYQSSHDAAQSCEEHVRIVQALEKGDLVLAEQ 189

Query: 61  LMHDHLQHVEAGLN-KAEVNDPLAPLRQALAPVSAVSAAS 99
           LM  H+  V+AGL  +A   DPLA LR AL+P+S   A S
Sbjct: 190 LMQAHIGSVQAGLQLQAAGGDPLAHLRSALSPLSPAKARS 229


>E6V851.1 E6V851_VARPD Transcriptional regulator, GntR family
          Length = 255

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 74/116 (63%), Gaps = 8/116 (6%)

Query: 1   VALCECLGNTLLSDTLRDLTARTTLTAMLHQSSEQAEDSCAEHVHIVAALERGDLAAAEQ 60
           V L ECLGNTLL+DTLRD TARTTL AML+QS+  A  SC +HV IVAALERGD AAAE 
Sbjct: 134 VCLAECLGNTLLADTLRDFTARTTLIAMLYQSTHDAVQSCEDHVQIVAALERGDHAAAEA 193

Query: 61  LMHDHLQHVEAGLNKAEVNDPLAPLRQALAPVSAVSAASVVGNAFAAPAKRKKTTS 116
           LM  H+  V++ L      DPLA LR ALAP+           A   P +RK + S
Sbjct: 194 LMATHIGTVQSALRVQAPTDPLAQLRDALAPLQ--------NTASTKPKRRKPSPS 241


>C9YEV3.1 C9YEV3_9BURK Putative uncharacterized protein
          Length = 297

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/102 (59%), Positives = 69/102 (67%), Gaps = 1/102 (0%)

Query: 1   VALCECLGNTLLSDTLRDLTARTTLTAMLHQSSEQAEDSCAEHVHIVAALERGDLAAAEQ 60
           V L ECLGN+LL+DTLRD TARTTL AML+QSS  A  SCAEH  IV ALE+ D   AEQ
Sbjct: 170 VCLAECLGNSLLADTLRDFTARTTLIAMLYQSSHDAAHSCAEHGRIVEALEKSDWVLAEQ 229

Query: 61  LMHDHLQHVEAGLN-KAEVNDPLAPLRQALAPVSAVSAASVV 101
           LM  H+ HV+  L  +    DPLA LR AL+PVS  S A  V
Sbjct: 230 LMQQHIGHVQDALRLQPAAEDPLAELRNALSPVSESSKAKPV 271