BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0528.p         (46 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ITJ5.1 D8ITJ5_HERSS Transmembrane cytochrome oxidase complex b...    82   3e-14
A6T2U0.1 A6T2U0_JANMA Uncharacterized conserved protein                70   7e-11
A4G939.1 A4G939_HERAR Putative uncharacterized protein                 70   7e-11
F1VVN8.1 F1VVN8_9BURK Cytochrome oxidase biogenesis protein Surf...    69   3e-10

>D8ITJ5.1 D8ITJ5_HERSS Transmembrane cytochrome oxidase complex biogenesis
           factor transmembrane protein
          Length = 240

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 40/44 (90%)

Query: 1   VRDWPAPSLGIDRHRGYAVQWYALALMAVIFFVVTGFRSGKKQR 44
           +RDWPAPSLGIDRHRGYAVQWYALA MAV+FF+VTGFR G+  +
Sbjct: 196 LRDWPAPSLGIDRHRGYAVQWYALAAMAVLFFIVTGFRRGRNDK 239


>A6T2U0.1 A6T2U0_JANMA Uncharacterized conserved protein
          Length = 237

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 33/42 (78%)

Query: 1   VRDWPAPSLGIDRHRGYAVQWYALALMAVIFFVVTGFRSGKK 42
           VRDWP PS G+D+HRGYA QWY LA MA IFFVVTG R G K
Sbjct: 196 VRDWPVPSSGVDKHRGYAFQWYGLAAMAFIFFVVTGIRRGTK 237


>A4G939.1 A4G939_HERAR Putative uncharacterized protein
          Length = 237

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 34/42 (80%)

Query: 1   VRDWPAPSLGIDRHRGYAVQWYALALMAVIFFVVTGFRSGKK 42
           VRDWP PS G+++HRGYA QWYALA MA IFFVVTG R G K
Sbjct: 196 VRDWPQPSSGVEKHRGYAFQWYALAAMAFIFFVVTGIRRGTK 237


>F1VVN8.1 F1VVN8_9BURK Cytochrome oxidase biogenesis protein Surf1,
           facilitates heme A insertion
          Length = 240

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 32/38 (84%)

Query: 1   VRDWPAPSLGIDRHRGYAVQWYALALMAVIFFVVTGFR 38
           VRDWP PS GID HRGYA QWYALA MA +FFVVTGFR
Sbjct: 199 VRDWPTPSSGIDMHRGYAFQWYALAGMAFLFFVVTGFR 236