BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0525.p (282 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value F1VVP0.1 F1VVP0_9BURK Heme A synthase, cytochrome oxidase biogen... 302 3e-80 D8ITJ3.1 D8ITJ3_HERSS Heme O oxygenase (Cytochrome aa3-controlli... 300 2e-79 A6T2T8.1 A6T2T8_JANMA Cytochrome c oxidase subunit XV assembly p... 279 4e-73 A4G937.1 A4G937_HERAR Putative cytochrome oxidase assembly 277 1e-72 Q476H9.1 Q476H9_CUPPJ Cytochrome oxidase assembly 263 2e-68 >F1VVP0.1 F1VVP0_9BURK Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA Length = 370 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 154/203 (75%), Positives = 173/203 (85%) Query: 1 MLIQLAVMGLLVALIPLTLTWVSNDADKYRKLVWITLFLTFDLIMFGAFTRLTDSGLGCP 60 MLIQLA+MG+L AL+PL++ WVS DADKYRKL W+TLFLTFDLI+FG FTRLTDSGLGCP Sbjct: 1 MLIQLAIMGVLAALLPLSVVWVSADADKYRKLSWVTLFLTFDLIIFGGFTRLTDSGLGCP 60 Query: 61 DWPGCYGHSNPLLAHEHISAAQEAMPTGPVTVAKAWIEMIHRYLAMAVGVLIITLMVIAW 120 DWPGCYGH+NPL AH ISAAQ AMP GPVTV KAWIEMIHRYLAM VGVLI++LMVIAW Sbjct: 61 DWPGCYGHANPLQAHAMISAAQSAMPEGPVTVFKAWIEMIHRYLAMGVGVLIVSLMVIAW 120 Query: 121 RRWIKSGRTELKFRPWFPTLLFLFVCLQGAFGAWTVTMKLQPVIVTIHLLLGLTLLAMLT 180 RW+KS R++ +F P PTLLFLFVCLQGAFGA+TVTMKLQP+IVT HLLLGL LL+MLT Sbjct: 121 IRWLKSARSDARFAPAMPTLLFLFVCLQGAFGAFTVTMKLQPIIVTGHLLLGLGLLSMLT 180 Query: 181 WLGARQNVHAPVSSPGRPHRRPA 203 WL ARQ H PV++ R PA Sbjct: 181 WLNARQRPHPPVAASAASLRGPA 203 >D8ITJ3.1 D8ITJ3_HERSS Heme O oxygenase (Cytochrome aa3-controlling) transmembrane protein EC=1.14.99.3 Length = 378 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 160/204 (78%), Positives = 172/204 (84%), Gaps = 1/204 (0%) Query: 1 MLIQLAVMGLLVALIPLTLTW-VSNDADKYRKLVWITLFLTFDLIMFGAFTRLTDSGLGC 59 MLIQL + GL+VALIPL + W A+KYRKLVW+TLF TFDLIMFGAFTRLTDSGLGC Sbjct: 5 MLIQLGLTGLVVALIPLAVVWRAQGAANKYRKLVWVTLFFTFDLIMFGAFTRLTDSGLGC 64 Query: 60 PDWPGCYGHSNPLLAHEHISAAQEAMPTGPVTVAKAWIEMIHRYLAMAVGVLIITLMVIA 119 PDWPGCY H+NPLLAHEHI+AAQEAMPTGPVT AKAWIEM HRY AMAVG LII LMV A Sbjct: 65 PDWPGCYSHANPLLAHEHINAAQEAMPTGPVTWAKAWIEMTHRYFAMAVGFLIIVLMVAA 124 Query: 120 WRRWIKSGRTELKFRPWFPTLLFLFVCLQGAFGAWTVTMKLQPVIVTIHLLLGLTLLAML 179 W RWI+SG+TEL+FRPWFPT L FVCLQGAFGAWTVTMKLQP+IVT+HLLLGL LLAML Sbjct: 125 WWRWIRSGKTELQFRPWFPTALLGFVCLQGAFGAWTVTMKLQPIIVTLHLLLGLNLLAML 184 Query: 180 TWLGARQNVHAPVSSPGRPHRRPA 203 TWL ARQ H PVS GR PA Sbjct: 185 TWLAARQEPHLPVSPAGRALIVPA 208 >A6T2T8.1 A6T2T8_JANMA Cytochrome c oxidase subunit XV assembly protein Length = 384 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 141/202 (69%), Positives = 161/202 (79%) Query: 2 LIQLAVMGLLVALIPLTLTWVSNDADKYRKLVWITLFLTFDLIMFGAFTRLTDSGLGCPD 61 L QL G+ VAL+ + W S D DKYRKLVW+TLFLTFD+IMFGAFTRLTDSGLGCPD Sbjct: 7 LFQLGSKGIFVALLAFVIVWSSKDPDKYRKLVWVTLFLTFDVIMFGAFTRLTDSGLGCPD 66 Query: 62 WPGCYGHSNPLLAHEHISAAQEAMPTGPVTVAKAWIEMIHRYLAMAVGVLIITLMVIAWR 121 WPGCYGH+NPL A EHI AA+ MP GPVTV KAW+EMIHRYLAM +GVLII ++VI+WR Sbjct: 67 WPGCYGHANPLQAMEHIRAAEALMPDGPVTVMKAWVEMIHRYLAMGIGVLIIAIVVISWR 126 Query: 122 RWIKSGRTELKFRPWFPTLLFLFVCLQGAFGAWTVTMKLQPVIVTIHLLLGLTLLAMLTW 181 W++SGR KF P FP L +FVC+QGAFGAWTVTMKLQPVIVTIHLLLG+TLL ML W Sbjct: 127 FWLQSGRAVHKFSPHFPVALLIFVCIQGAFGAWTVTMKLQPVIVTIHLLLGMTLLGMLAW 186 Query: 182 LGARQNVHAPVSSPGRPHRRPA 203 +GARQ H PV++ R PA Sbjct: 187 VGARQKEHPPVAAAAYALRIPA 208 >A4G937.1 A4G937_HERAR Putative cytochrome oxidase assembly Length = 379 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 141/203 (69%), Positives = 162/203 (79%) Query: 1 MLIQLAVMGLLVALIPLTLTWVSNDADKYRKLVWITLFLTFDLIMFGAFTRLTDSGLGCP 60 ML QLA GL VAL+ + W S D +KYRKLVW+T+FLTFD+IMFGAFTRLTDSGLGCP Sbjct: 1 MLFQLASKGLFVALLACVIVWSSRDPNKYRKLVWVTMFLTFDVIMFGAFTRLTDSGLGCP 60 Query: 61 DWPGCYGHSNPLLAHEHISAAQEAMPTGPVTVAKAWIEMIHRYLAMAVGVLIITLMVIAW 120 DWPGCYGH+NPL A EHI AA+ MP GPVTV KAW+EMIHRYLAM +GVLII ++VIAW Sbjct: 61 DWPGCYGHANPLQALEHIRAAEALMPDGPVTVMKAWVEMIHRYLAMGIGVLIIAIVVIAW 120 Query: 121 RRWIKSGRTELKFRPWFPTLLFLFVCLQGAFGAWTVTMKLQPVIVTIHLLLGLTLLAMLT 180 R W++SGRT +F P +P LL FVC+QGAFGAWTVTMKLQP+IVTIHLLLG+ LL MLT Sbjct: 121 RFWLQSGRTLTRFSPRYPMLLLFFVCVQGAFGAWTVTMKLQPIIVTIHLLLGMALLGMLT 180 Query: 181 WLGARQNVHAPVSSPGRPHRRPA 203 W+GARQ H V + R PA Sbjct: 181 WVGARQKDHPFVDARALTLRTPA 203 >Q476H9.1 Q476H9_CUPPJ Cytochrome oxidase assembly Length = 367 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 133/203 (65%), Positives = 157/203 (77%), Gaps = 5/203 (2%) Query: 1 MLIQLAVMGLLVALIPLTLTWVSNDADKYRKLVWITLFLTFDLIMFGAFTRLTDSGLGCP 60 ML+QL ++G+L+AL P++ V D +KYRKLVWIT FLT DLIMFG+FTRLTDSGLGCP Sbjct: 1 MLLQLGIIGILIALFPISYVLVRGDRNKYRKLVWITAFLTLDLIMFGSFTRLTDSGLGCP 60 Query: 61 DWPGCYGHSNPLLAHEHISAAQEAMPTGPVTVAKAWIEMIHRYLAMAVGVLIITLMVIAW 120 DWPGCYGHSNP A E I AA+ A+P+GPVT+AKAWIEMIHRY AMAVGVLIITLMV+AW Sbjct: 61 DWPGCYGHSNPHSAVEPIRAAETALPSGPVTLAKAWIEMIHRYFAMAVGVLIITLMVLAW 120 Query: 121 RRWIKSGRTELKFRPWFPTLLFLFVCLQGAFGAWTVTMKLQPVIVTIHLLLGLTLLAMLT 180 + R ELK PWF T + L VC+QGAFGA+TVTMKLQP+IV HLLLG++LLA L Sbjct: 121 VK-----RKELKQSPWFATGVLLLVCVQGAFGAFTVTMKLQPIIVVTHLLLGMSLLAALI 175 Query: 181 WLGARQNVHAPVSSPGRPHRRPA 203 WLG+R + V+ R PA Sbjct: 176 WLGSRNDPRHLVAPEAGALRWPA 198