BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0522.p         (198 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ITJ1.1 D8ITJ1_HERSS Lipoprotein                                     312   2e-83
A4G935.1 A4G935_HERAR Putative electron transport protein SCO1/SenC   302   1e-80
A6T2T6.1 A6T2T6_JANMA SenC family protein                             288   3e-76
Q476H7.1 Q476H7_CUPPJ Electron transport protein SCO1/SenC            256   9e-67
B2AGR9.1 B2AGR9_CUPTR Putative cytochrome c oxidase assembly fac...   254   6e-66

>D8ITJ1.1 D8ITJ1_HERSS Lipoprotein
          Length = 196

 Score =  312 bits (799), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 157/199 (78%), Positives = 166/199 (83%), Gaps = 4/199 (2%)

Query: 1   MKRLLSFLPAALLALGMLSLAGCQQSAAE-KFVNTDVTGLEYAKDFALTDHNGKPRTLAD 59
           MKR   FL A LLA     LA C  S  E KF NTDVTGL+YAKDFALTDH GKPRTLAD
Sbjct: 1   MKR---FLSALLLAGCATLLAACGPSKPELKFNNTDVTGLDYAKDFALTDHTGKPRTLAD 57

Query: 60  FKGKAVVMFFGYTQCPDVCPTTMAEMANVMKELGPQADKVQVLFVTVDPARDTPQILSQY 119
           FKGK VVMFFGYTQCPDVCPTTM EM+NVMKELGP ADKVQVLFVTVDP RDT ++LSQY
Sbjct: 58  FKGKVVVMFFGYTQCPDVCPTTMVEMSNVMKELGPDADKVQVLFVTVDPERDTQEVLSQY 117

Query: 120 VPAFDKRFLGLYGDEAATAKVAKEFKVFYQKVPGKTAGSYTMDHTAGSYVFDPQGHIRLF 179
           VPAFDKRFLGL GD+  T KVAKEFKVFYQKVPGK  GSYTMDHTAGSYVFDPQG IRLF
Sbjct: 118 VPAFDKRFLGLRGDQQQTEKVAKEFKVFYQKVPGKQPGSYTMDHTAGSYVFDPQGRIRLF 177

Query: 180 VRHGQGAEPIVHDLKLLLS 198
           V+HGQG + + HD+KLLLS
Sbjct: 178 VKHGQGPQTLAHDIKLLLS 196


>A4G935.1 A4G935_HERAR Putative electron transport protein SCO1/SenC
          Length = 187

 Score =  302 bits (774), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/182 (79%), Positives = 155/182 (85%)

Query: 17  MLSLAGCQQSAAEKFVNTDVTGLEYAKDFALTDHNGKPRTLADFKGKAVVMFFGYTQCPD 76
           +L L+ C   A   F NTDVTGL Y KDF+LTDHNGKPRTLADFKGKAVV+FFG+TQCPD
Sbjct: 5   VLGLSACSGKAPPAFTNTDVTGLAYGKDFSLTDHNGKPRTLADFKGKAVVVFFGFTQCPD 64

Query: 77  VCPTTMAEMANVMKELGPQADKVQVLFVTVDPARDTPQILSQYVPAFDKRFLGLYGDEAA 136
           VCPTTM EMANVMK LGP ADKVQVLFVTVDP RDT ++L QYVPAFD RFLGL GD A 
Sbjct: 65  VCPTTMLEMANVMKALGPDADKVQVLFVTVDPERDTAELLKQYVPAFDPRFLGLRGDLAE 124

Query: 137 TAKVAKEFKVFYQKVPGKTAGSYTMDHTAGSYVFDPQGHIRLFVRHGQGAEPIVHDLKLL 196
           T K AKEFKVFYQKVPGKT GSYT+DHTAGSYVFD QG IRLF+RHGQG EPIVHDLK+L
Sbjct: 125 TEKTAKEFKVFYQKVPGKTPGSYTIDHTAGSYVFDTQGRIRLFIRHGQGTEPIVHDLKIL 184

Query: 197 LS 198
           L+
Sbjct: 185 LA 186


>A6T2T6.1 A6T2T6_JANMA SenC family protein
          Length = 198

 Score =  288 bits (737), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/195 (71%), Positives = 158/195 (81%), Gaps = 1/195 (0%)

Query: 5   LSFLPAALLALGMLSLAGCQQSAAE-KFVNTDVTGLEYAKDFALTDHNGKPRTLADFKGK 63
           + F    ++   + +L  C   A +  F NTD+TGL YAK+F+L DHNGK RTLADFKGK
Sbjct: 1   MRFRSLLVICAALFALTACSDKAKQVAFNNTDLTGLGYAKEFSLHDHNGKLRTLADFKGK 60

Query: 64  AVVMFFGYTQCPDVCPTTMAEMANVMKELGPQADKVQVLFVTVDPARDTPQILSQYVPAF 123
           AVV+FFG+TQCPDVCPTTM EM+NVMK LGP AD+VQVLFVTVDP RDT  +L+QYVPAF
Sbjct: 61  AVVVFFGFTQCPDVCPTTMMEMSNVMKALGPDADRVQVLFVTVDPERDTAALLAQYVPAF 120

Query: 124 DKRFLGLYGDEAATAKVAKEFKVFYQKVPGKTAGSYTMDHTAGSYVFDPQGHIRLFVRHG 183
           D RFLGL GD A T KVAKEFKVFYQKVPGKT GSYT+DHTAGSYVFDPQG IRLF+RHG
Sbjct: 121 DPRFLGLRGDLAETEKVAKEFKVFYQKVPGKTPGSYTVDHTAGSYVFDPQGRIRLFIRHG 180

Query: 184 QGAEPIVHDLKLLLS 198
           QG +PIV DLK LL+
Sbjct: 181 QGIDPIVQDLKTLLA 195


>Q476H7.1 Q476H7_CUPPJ Electron transport protein SCO1/SenC
          Length = 231

 Score =  256 bits (655), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 123/178 (69%), Positives = 145/178 (81%), Gaps = 3/178 (1%)

Query: 23  CQQSAAEKFVNTDVTG-LEYAKDFALTDHNGKPRTLADFKGKAVVMFFGYTQCPDVCPTT 81
           C Q  A  F N D++G  ++ KDF+L DHNGK RT++DFKGK VVMFFGYT CPDVCPTT
Sbjct: 55  CGQQKAS-FRNVDISGGADFGKDFSLIDHNGKVRTISDFKGKVVVMFFGYTHCPDVCPTT 113

Query: 82  MAEMANVMKELGPQADKVQVLFVTVDPARDTPQILSQYVPAFDKRFLGLY-GDEAATAKV 140
           MAE+  VM++LGP ADKVQVLFVTVDP RDT  +L+QYVPAFD RFLG+   DEAA  KV
Sbjct: 114 MAELKAVMEQLGPDADKVQVLFVTVDPERDTQALLAQYVPAFDPRFLGMRPADEAALQKV 173

Query: 141 AKEFKVFYQKVPGKTAGSYTMDHTAGSYVFDPQGHIRLFVRHGQGAEPIVHDLKLLLS 198
           AK+FKV+Y KVPG +  +YTMDH+AGSYVFDP+GH+RLF+RHGQG EPI HD+K LLS
Sbjct: 174 AKDFKVYYAKVPGTSPNNYTMDHSAGSYVFDPEGHLRLFIRHGQGPEPIAHDIKQLLS 231


>B2AGR9.1 B2AGR9_CUPTR Putative cytochrome c oxidase assembly factor, scoC
          Length = 206

 Score =  254 bits (648), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 123/178 (69%), Positives = 144/178 (80%), Gaps = 3/178 (1%)

Query: 23  CQQSAAEKFVNTDVTGL-EYAKDFALTDHNGKPRTLADFKGKAVVMFFGYTQCPDVCPTT 81
           C Q  A  F N D+TG  ++ KDF+LTDH GK RTLAD+KGKAVVMFFGYT CPDVCPTT
Sbjct: 30  CGQQKAS-FRNVDITGAADFGKDFSLTDHTGKVRTLADYKGKAVVMFFGYTHCPDVCPTT 88

Query: 82  MAEMANVMKELGPQADKVQVLFVTVDPARDTPQILSQYVPAFDKRFLGLY-GDEAATAKV 140
           MAE+  VM++LGP AD+VQVLFVTVDP RDT  +L+QYVPAFD RF+GL   DEA+  K+
Sbjct: 89  MAELKAVMEKLGPDADRVQVLFVTVDPERDTQALLAQYVPAFDPRFVGLRPADEASLQKL 148

Query: 141 AKEFKVFYQKVPGKTAGSYTMDHTAGSYVFDPQGHIRLFVRHGQGAEPIVHDLKLLLS 198
           AK+FKVFY KVPG +  +YT+DH+AGSYVFDP G +RLF+RHGQG EPI HDLK LLS
Sbjct: 149 AKDFKVFYAKVPGSSPNNYTVDHSAGSYVFDPNGKLRLFIRHGQGPEPIAHDLKQLLS 206