BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0506.p         (85 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ITI0.1 D8ITI0_HERSS [4Fe-4S]-type ferredoxin protein                159   1e-37
A4G926.1 A4G926_HERAR Ferredoxin                                      146   9e-34
A6T2S7.1 A6T2S7_JANMA Ferredoxin                                      146   1e-33
F1VX02.1 F1VX02_9BURK 4Fe-4S ferredoxin, iron-sulfur binding          145   2e-33
Q0KEQ2.1 Q0KEQ2_CUPNH Ferredoxin                                      137   5e-31

>D8ITI0.1 D8ITI0_HERSS [4Fe-4S]-type ferredoxin protein
          Length = 86

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/85 (89%), Positives = 80/85 (94%)

Query: 1  MALMITDDCINCDVCEPECPNEAIYMGPQIYEIDHNKCTECVGHFDEPQCQQVCPVACIP 60
          MALMITDDCINCDVCEPECPNEAIYMGPQIYEID +KCTECVGHF+EPQCQQVCPVACIP
Sbjct: 1  MALMITDDCINCDVCEPECPNEAIYMGPQIYEIDPDKCTECVGHFEEPQCQQVCPVACIP 60

Query: 61 FDPAWRESKEQLMLKYETLQAAAKS 85
          F+PAWRES+EQLM KYE LQA AK 
Sbjct: 61 FNPAWRESREQLMEKYERLQAEAKR 85


>A4G926.1 A4G926_HERAR Ferredoxin
          Length = 87

 Score =  146 bits (369), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 75/84 (89%)

Query: 1  MALMITDDCINCDVCEPECPNEAIYMGPQIYEIDHNKCTECVGHFDEPQCQQVCPVACIP 60
          MAL+ITD+CINCDVCEPECPN+AIYMG +IYEID  KCTECVGHFDEPQCQQVCPV CIP
Sbjct: 1  MALLITDECINCDVCEPECPNDAIYMGQEIYEIDPTKCTECVGHFDEPQCQQVCPVECIP 60

Query: 61 FDPAWRESKEQLMLKYETLQAAAK 84
          F+PAWRESKE+L  KYE LQA  K
Sbjct: 61 FNPAWRESKEELQAKYERLQAELK 84


>A6T2S7.1 A6T2S7_JANMA Ferredoxin
          Length = 87

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/85 (80%), Positives = 76/85 (89%)

Query: 1  MALMITDDCINCDVCEPECPNEAIYMGPQIYEIDHNKCTECVGHFDEPQCQQVCPVACIP 60
          MAL+ITD+CINCDVCEPECPN+AIYMG +IYEID  KCTECVGHFDEPQCQQVCPV+CIP
Sbjct: 1  MALLITDECINCDVCEPECPNDAIYMGQEIYEIDPTKCTECVGHFDEPQCQQVCPVSCIP 60

Query: 61 FDPAWRESKEQLMLKYETLQAAAKS 85
          F+P WRESKE+L  KYE LQA  K+
Sbjct: 61 FNPEWRESKEELQAKYERLQAELKT 85


>F1VX02.1 F1VX02_9BURK 4Fe-4S ferredoxin, iron-sulfur binding
          Length = 86

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 78/85 (91%)

Query: 1  MALMITDDCINCDVCEPECPNEAIYMGPQIYEIDHNKCTECVGHFDEPQCQQVCPVACIP 60
          MAL+ITD+CINCDVCEPECPN+AI++GP+IY+ID  KCTECVGHF+EPQCQQVCPV+CIP
Sbjct: 1  MALLITDECINCDVCEPECPNDAIFLGPEIYQIDPGKCTECVGHFNEPQCQQVCPVSCIP 60

Query: 61 FDPAWRESKEQLMLKYETLQAAAKS 85
          FDPAWRESK++L+LK++ LQ    S
Sbjct: 61 FDPAWRESKDELLLKFDRLQRKKNS 85


>Q0KEQ2.1 Q0KEQ2_CUPNH Ferredoxin
          Length = 86

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 71/85 (83%)

Query: 1  MALMITDDCINCDVCEPECPNEAIYMGPQIYEIDHNKCTECVGHFDEPQCQQVCPVACIP 60
          MALMITDDCINCDVCEPECPNEAI MGP+IYEID NKCTECVGHFDEPQCQQVCPVACIP
Sbjct: 1  MALMITDDCINCDVCEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVACIP 60

Query: 61 FDPAWRESKEQLMLKYETLQAAAKS 85
           DP   E+ E LM +Y  L AA  +
Sbjct: 61 KDPNRVETHEVLMQRYRLLTAAKHA 85