BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0496.p         (149 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ITB7.1 D8ITB7_HERSS ABC-type transport system involved in resi...   258   2e-67
A6T390.1 A6T390_JANMA ABC-type transport system involved in resi...   234   2e-60
A4G9K0.1 A4G9K0_HERAR Putative ABC transporter                        234   4e-60
F1W3A6.1 F1W3A6_9BURK Uncharacterized ABC transporter, periplasm...   233   7e-60
C3X668.1 C3X668_OXAFO ABC transporter periplasmic substrate-bind...   231   2e-59

>D8ITB7.1 D8ITB7_HERSS ABC-type transport system involved in resistance to
           organic solvents, periplasmic component protein
          Length = 158

 Score =  258 bits (659), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/149 (85%), Positives = 137/149 (91%)

Query: 1   VGLFVLLGAAALVFLALKAGNMSSFSFSQKTYSITTKFDNIGGLKPRAAVKSAGVVVGRV 60
           VG+FVLLG AALVFLALKAGNMSS SF QKTY+I   FDNIGGLK RAAVKSAGVVVGRV
Sbjct: 10  VGIFVLLGVAALVFLALKAGNMSSMSFGQKTYTIKASFDNIGGLKSRAAVKSAGVVVGRV 69

Query: 61  DAIRFDDKTFQASVTLNMDERYQFPKDSSAKILTSGLLGEQYVGIEPGGDVKNLAAGDTI 120
           D+IRFDD+TF+A V+LNMDE Y+FPKDSSAKILTSGLLGEQY+GIEPGGD  NLA+GDTI
Sbjct: 70  DSIRFDDQTFRAVVSLNMDESYKFPKDSSAKILTSGLLGEQYIGIEPGGDTANLASGDTI 129

Query: 121 KMTQSAIVLENLISQFLYSKAAEGKDNSK 149
           KMTQSAIVLENLI QFLYSKAAEGKD+SK
Sbjct: 130 KMTQSAIVLENLIGQFLYSKAAEGKDDSK 158


>A6T390.1 A6T390_JANMA ABC-type transport system involved in resistance to
           organic solvents, periplasmic component
          Length = 157

 Score =  234 bits (598), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 117/149 (78%), Positives = 130/149 (87%), Gaps = 1/149 (0%)

Query: 1   VGLFVLLGAAALVFLALKAGNMSSFSFSQKTYSITTKFDNIGGLKPRAAVKSAGVVVGRV 60
           VGLFVLLGAAAL FLA+KAGNMSS SF Q  Y + T+FDNIGGLKPRA VKSAGVVVGRV
Sbjct: 10  VGLFVLLGAAALFFLAMKAGNMSSLSFEQ-VYPVVTRFDNIGGLKPRAPVKSAGVVVGRV 68

Query: 61  DAIRFDDKTFQASVTLNMDERYQFPKDSSAKILTSGLLGEQYVGIEPGGDVKNLAAGDTI 120
             I FDDK++QA+VTLN++ RY FPKDSSAKILTSGLLGEQYVG+EPGGD  NLAAGD I
Sbjct: 69  ADISFDDKSYQATVTLNIESRYVFPKDSSAKILTSGLLGEQYVGLEPGGDTVNLAAGDRI 128

Query: 121 KMTQSAIVLENLISQFLYSKAAEGKDNSK 149
            MTQSA+VLENLISQFL+SKA EGK++ K
Sbjct: 129 TMTQSAMVLENLISQFLFSKATEGKEDQK 157


>A4G9K0.1 A4G9K0_HERAR Putative ABC transporter
          Length = 155

 Score =  234 bits (596), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 115/147 (78%), Positives = 132/147 (89%), Gaps = 1/147 (0%)

Query: 1   VGLFVLLGAAALVFLALKAGNMSSFSFSQKTYSITTKFDNIGGLKPRAAVKSAGVVVGRV 60
           VGLFV+LGA AL+FLALKAGNMSSFSF +K Y++ T+FDNIGGLKPRA VKSAGVVVGRV
Sbjct: 10  VGLFVVLGAVALLFLALKAGNMSSFSF-EKNYTVITRFDNIGGLKPRAPVKSAGVVVGRV 68

Query: 61  DAIRFDDKTFQASVTLNMDERYQFPKDSSAKILTSGLLGEQYVGIEPGGDVKNLAAGDTI 120
             I+FDDK +QASVTL+++ RYQFPKD+SAKILTSGLLGEQY+G+E GGD  NLAAGD I
Sbjct: 69  ADIKFDDKHYQASVTLDIESRYQFPKDTSAKILTSGLLGEQYIGLEAGGDTVNLAAGDRI 128

Query: 121 KMTQSAIVLENLISQFLYSKAAEGKDN 147
            MTQSA+VLENLISQFL+SKAAEGK+ 
Sbjct: 129 TMTQSAMVLENLISQFLFSKAAEGKEE 155


>F1W3A6.1 F1W3A6_9BURK Uncharacterized ABC transporter, periplasmic component
           YrbD
          Length = 157

 Score =  233 bits (594), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 115/149 (77%), Positives = 132/149 (88%), Gaps = 1/149 (0%)

Query: 1   VGLFVLLGAAALVFLALKAGNMSSFSFSQKTYSITTKFDNIGGLKPRAAVKSAGVVVGRV 60
           VGLFVLLGAAAL FLA+KAGN+SS SF+Q TY +T +FDNIGGLKPRA VKSAGVVVGRV
Sbjct: 10  VGLFVLLGAAALFFLAMKAGNLSSLSFAQ-TYPVTMRFDNIGGLKPRAPVKSAGVVVGRV 68

Query: 61  DAIRFDDKTFQASVTLNMDERYQFPKDSSAKILTSGLLGEQYVGIEPGGDVKNLAAGDTI 120
             I F+D+ FQASVT+NM+ RY+FPKDSSAKILTSGLLGEQY+G+EPGGD   LAAGD I
Sbjct: 69  ADIAFNDQRFQASVTVNMETRYKFPKDSSAKILTSGLLGEQYIGLEPGGDTNLLAAGDNI 128

Query: 121 KMTQSAIVLENLISQFLYSKAAEGKDNSK 149
           +MTQSA+VLENLI+QFL+SKAA+GKD  K
Sbjct: 129 RMTQSALVLENLITQFLFSKAADGKDEKK 157


>C3X668.1 C3X668_OXAFO ABC transporter periplasmic substrate-binding protein
          Length = 151

 Score =  231 bits (590), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 116/143 (81%), Positives = 130/143 (90%), Gaps = 1/143 (0%)

Query: 1   VGLFVLLGAAALVFLALKAGNMSSFSFSQKTYSITTKFDNIGGLKPRAAVKSAGVVVGRV 60
           VGLFVLLGA AL+FLALKAGNMSSFSF +KTY+++++FDNIGGLKPRA VKSAGVVVGRV
Sbjct: 10  VGLFVLLGAVALMFLALKAGNMSSFSF-EKTYTVSSRFDNIGGLKPRAPVKSAGVVVGRV 68

Query: 61  DAIRFDDKTFQASVTLNMDERYQFPKDSSAKILTSGLLGEQYVGIEPGGDVKNLAAGDTI 120
             I FDD+ F+A VTL + ERY+FPKDSSAKILTSGLLGEQYVGIEPGGD  +LA+GD I
Sbjct: 69  GDISFDDQDFRALVTLQLQERYKFPKDSSAKILTSGLLGEQYVGIEPGGDEASLASGDQI 128

Query: 121 KMTQSAIVLENLISQFLYSKAAE 143
           KMTQSAIVLENLISQF+YSKAAE
Sbjct: 129 KMTQSAIVLENLISQFIYSKAAE 151