BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0469.p (344 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISV6.1 D8ISV6_HERSS Periplasmic trypsin-like serine protease p... 573 e-161 A4G9H8.1 A4G9H8_HERAR Putative peptidase S1 528 e-148 A6T368.1 A6T368_JANMA Htra-like serine protease signal peptide p... 524 e-147 F1VX72.1 F1VX72_9BURK Outer membrane stress sensor protease DegS 512 e-143 C3X651.1 C3X651_OXAFO Peptidase S1 and S6 490 e-136 >D8ISV6.1 D8ISV6_HERSS Periplasmic trypsin-like serine protease protein EC=3.4.21.- Length = 393 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 293/342 (85%), Positives = 317/342 (92%) Query: 1 MQEAASGTPTPNSYRDAARQAMPSVVNIFTTTEARPQKNPFMDDPFFKKFFGDQFEDQQQ 60 MQEA P +SYR AARQAMPSVVNIFTTTEARPQK+PF +DPFF+KFFGDQF++QQQ Sbjct: 47 MQEATPNAPALDSYRHAARQAMPSVVNIFTTTEARPQKSPFQNDPFFRKFFGDQFDEQQQ 106 Query: 61 DDKQSSLGSGVIVSPQGYILTNNHVVEAADEIEVALADGRKASAKVVGTDPETDLAVIKV 120 DDKQSSLGSGVIVSPQGYILTNNHVVEAAD+IEVALADGRKASAKVVG DPETDLAVIK+ Sbjct: 107 DDKQSSLGSGVIVSPQGYILTNNHVVEAADKIEVALADGRKASAKVVGIDPETDLAVIKI 166 Query: 121 DLPNLPAITLAHVEQATVGDIVLAIGNPFGVGQTVTMGIISALGRNHLGINTFENFIQTD 180 DLPNLPAITL H E ++VGD+VLAIGNPFGVGQTVTMGI+SALGRNHLGINTFENFIQTD Sbjct: 167 DLPNLPAITLGHPENSSVGDVVLAIGNPFGVGQTVTMGIVSALGRNHLGINTFENFIQTD 226 Query: 181 AAINPGNSGGALVDTNGNLLGINTAIYSRTGGNLGIGFAIPVSTAKTVMEAIINHGQVVR 240 AAINPGNSGGALVDTNGNLLGINTAIYSRTGGNLGIGFAIP+STAKTVMEAII+HGQVVR Sbjct: 227 AAINPGNSGGALVDTNGNLLGINTAIYSRTGGNLGIGFAIPMSTAKTVMEAIISHGQVVR 286 Query: 241 GWIGVEPQDITPELAESFGLTKKTGAIIAGVLKNGPADKAGMKPGDILISVENKAVTDTT 300 GWIGVEPQDITPELAESFGL KKTGAIIAGVLK GPAD+AGM+PGDIL+S+++K V DTT Sbjct: 287 GWIGVEPQDITPELAESFGLGKKTGAIIAGVLKGGPADRAGMRPGDILVSIDDKPVADTT 346 Query: 301 EMLNLIAQLIPGQKARMTVLRKAQETTLEIVVGKRPPLKREE 342 EMLN+IAQL PGQ+ MTVLRK+QET L I VGKRPP + E Sbjct: 347 EMLNVIAQLTPGQQIAMTVLRKSQETKLNITVGKRPPPPKNE 388 >A4G9H8.1 A4G9H8_HERAR Putative peptidase S1 Length = 391 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 266/338 (78%), Positives = 294/338 (86%), Gaps = 4/338 (1%) Query: 1 MQEAASGT-PTPNSYRDAARQAMPSVVNIFTTTEARPQKNPFMDDPFFKKFFGDQFEDQQ 59 M EA T PT S+RDAA+ AMPSVVNIFT+ A P +NPFMDDPFF+KFFGD+F+DQQ Sbjct: 48 MLEAPLNTAPTQGSFRDAAKLAMPSVVNIFTSKTATPSQNPFMDDPFFRKFFGDRFDDQQ 107 Query: 60 QDDKQSSLGSGVIVSPQGYILTNNHVVEAADEIEVALADGRKASAKVVGTDPETDLAVIK 119 + KQ SLGSGVIVS QGYILTNNHVVEAADEIEVALADGRKA AKVVG DPETDLAV+K Sbjct: 108 E--KQVSLGSGVIVSAQGYILTNNHVVEAADEIEVALADGRKAIAKVVGADPETDLAVVK 165 Query: 120 VDLPNLPAITLAHVEQATVGDIVLAIGNPFGVGQTVTMGIISALGRNHLGI-NTFENFIQ 178 +DL NLPAITL HVE+A VGD+VLAIGNPFGVGQTVTMGIISALGRNHLGI + FENFIQ Sbjct: 166 IDLDNLPAITLGHVEEARVGDVVLAIGNPFGVGQTVTMGIISALGRNHLGILDAFENFIQ 225 Query: 179 TDAAINPGNSGGALVDTNGNLLGINTAIYSRTGGNLGIGFAIPVSTAKTVMEAIINHGQV 238 TDAAINPGNSGGAL+D NGNLLGINTAIYSR+GG+LGIGFAIPV+T K+VM+AII +GQV Sbjct: 226 TDAAINPGNSGGALIDANGNLLGINTAIYSRSGGSLGIGFAIPVTTVKSVMDAIIKNGQV 285 Query: 239 VRGWIGVEPQDITPELAESFGLTKKTGAIIAGVLKNGPADKAGMKPGDILISVENKAVTD 298 VRG+IGVEPQDITPELAESFGL K GAIIAGVLK GPADKAGM+PGDIL+SVE KAV D Sbjct: 286 VRGYIGVEPQDITPELAESFGLKKSKGAIIAGVLKGGPADKAGMQPGDILVSVEGKAVVD 345 Query: 299 TTEMLNLIAQLIPGQKARMTVLRKAQETTLEIVVGKRP 336 +MLN IAQL PG KA+ VLR+ QE TL + +G RP Sbjct: 346 MADMLNQIAQLSPGTKAKFIVLRRNQENTLNVTIGLRP 383 >A6T368.1 A6T368_JANMA Htra-like serine protease signal peptide protein EC=3.4.21.- Length = 391 Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust. Identities = 267/346 (77%), Positives = 298/346 (86%), Gaps = 6/346 (1%) Query: 1 MQEAASGT-PTPNSYRDAARQAMPSVVNIFTTTEARPQKNPFMDDPFFKKFFGDQFEDQQ 59 M EA T PT S+RDAA+ AMPSVVNIFT+ P +NPFMDDPFF+KFFGD+F++QQ Sbjct: 48 MLEAPPNTAPTEGSFRDAAKLAMPSVVNIFTSKTPSPSQNPFMDDPFFRKFFGDRFDEQQ 107 Query: 60 QDDKQSSLGSGVIVSPQGYILTNNHVVEAADEIEVALADGRKASAKVVGTDPETDLAVIK 119 + KQ SLGSGVIVS +GYILTNNHVVEAADEIEVAL DGRKA AKVVG+DPETDLAVIK Sbjct: 108 E--KQVSLGSGVIVSAEGYILTNNHVVEAADEIEVALTDGRKAIAKVVGSDPETDLAVIK 165 Query: 120 VDLPNLPAITLAHVEQATVGDIVLAIGNPFGVGQTVTMGIISALGRNHLGI-NTFENFIQ 178 ++L NLPAITL VE+A VGD+VLAIGNPFGVGQTVTMGIISALGRNHLGI + FENFIQ Sbjct: 166 INLDNLPAITLGRVEEARVGDVVLAIGNPFGVGQTVTMGIISALGRNHLGILDAFENFIQ 225 Query: 179 TDAAINPGNSGGALVDTNGNLLGINTAIYSRTGGNLGIGFAIPVSTAKTVMEAIINHGQV 238 TDAAINPGNSGGAL+D NGNLLGINTAIYSR+GG+LGIGFAIPV+T K+VM+AII +G V Sbjct: 226 TDAAINPGNSGGALIDANGNLLGINTAIYSRSGGSLGIGFAIPVTTVKSVMDAIIKNGHV 285 Query: 239 VRGWIGVEPQDITPELAESFGLTKKTGAIIAGVLKNGPADKAGMKPGDILISVENKAVTD 298 VRG+IGVEPQDITPELAESFGL K TGAIIAGVLK GPADKAGM+PGDIL+SVE KAVTD Sbjct: 286 VRGYIGVEPQDITPELAESFGLKKSTGAIIAGVLKGGPADKAGMQPGDILVSVEGKAVTD 345 Query: 299 TTEMLNLIAQLIPGQKARMTVLRKAQETTLEIVVGKRP--PLKREE 342 +MLN IAQL PG KA++ VLR+ QE TL I VG RP P + EE Sbjct: 346 MADMLNQIAQLSPGTKAKVVVLRRNQENTLNITVGMRPKAPARAEE 391 >F1VX72.1 F1VX72_9BURK Outer membrane stress sensor protease DegS Length = 322 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 252/315 (80%), Positives = 280/315 (88%), Gaps = 3/315 (0%) Query: 22 MPSVVNIFTTTEARPQKNPFMDDPFFKKFFGDQFEDQQQDDKQSSLGSGVIVSPQGYILT 81 MPSV NI+TT AR +NP +DDPFF+KFFG++ E QD+KQ SLGSGV++S QGYILT Sbjct: 1 MPSVGNIYTTKGARQARNPMLDDPFFRKFFGERPE---QDEKQVSLGSGVVISSQGYILT 57 Query: 82 NNHVVEAADEIEVALADGRKASAKVVGTDPETDLAVIKVDLPNLPAITLAHVEQATVGDI 141 NNHVVEAADEIEVA ADGRKA AKVVG DPETDLAV++VDL NLPAITL +EQ VGD+ Sbjct: 58 NNHVVEAADEIEVAFADGRKAVAKVVGADPETDLAVVRVDLQNLPAITLGRIEQTMVGDV 117 Query: 142 VLAIGNPFGVGQTVTMGIISALGRNHLGINTFENFIQTDAAINPGNSGGALVDTNGNLLG 201 VLAIGNPFGVGQTVTMGIISALGRNHL INTFENFIQTDAAINPGNSGGAL+DTNGNLLG Sbjct: 118 VLAIGNPFGVGQTVTMGIISALGRNHLNINTFENFIQTDAAINPGNSGGALIDTNGNLLG 177 Query: 202 INTAIYSRTGGNLGIGFAIPVSTAKTVMEAIINHGQVVRGWIGVEPQDITPELAESFGLT 261 INTAIYSR+GG+LGIGFA+PVSTAK V E+II G VVRGWIGVEPQDITPELAESFGL Sbjct: 178 INTAIYSRSGGSLGIGFAVPVSTAKMVTESIIKTGSVVRGWIGVEPQDITPELAESFGLN 237 Query: 262 KKTGAIIAGVLKNGPADKAGMKPGDILISVENKAVTDTTEMLNLIAQLIPGQKARMTVLR 321 +K+GAIIAGV ++GPAD+AGM+PGDIL++VE K VTDTTEMLNLIAQL PG KA+MTV R Sbjct: 238 RKSGAIIAGVQRSGPADRAGMRPGDILVAVEGKPVTDTTEMLNLIAQLKPGVKAKMTVQR 297 Query: 322 KAQETTLEIVVGKRP 336 K QETTLE+ VGKRP Sbjct: 298 KLQETTLEVTVGKRP 312 >C3X651.1 C3X651_OXAFO Peptidase S1 and S6 Length = 394 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 236/332 (71%), Positives = 282/332 (84%), Gaps = 3/332 (0%) Query: 9 PTPNSYRDAARQAMPSVVNIFTTTEARPQKNPFMDDPFFKKFFGDQFEDQQQDDKQSSLG 68 P SYRDA +AMP+VVNI+T+ E R ++P +DDPF K+FFG++F D + KQ SLG Sbjct: 60 PAQASYRDAVSRAMPAVVNIYTSKEVRQPQSPLLDDPFLKRFFGERFNDTE---KQMSLG 116 Query: 69 SGVIVSPQGYILTNNHVVEAADEIEVALADGRKASAKVVGTDPETDLAVIKVDLPNLPAI 128 SGV+ + GY+LTNNHVVE AD+IEVA DGRKA+A++VGTDPETDLAVIK+DLP+LPA+ Sbjct: 117 SGVVATHDGYVLTNNHVVETADQIEVAFEDGRKAAARLVGTDPETDLAVIKIDLPDLPAV 176 Query: 129 TLAHVEQATVGDIVLAIGNPFGVGQTVTMGIISALGRNHLGINTFENFIQTDAAINPGNS 188 T +V+ A VGD+VLAIGNPFGVGQTVTMGIISALGR+ LGIN +ENFIQTDAAINPGNS Sbjct: 177 TFGNVDDAKVGDVVLAIGNPFGVGQTVTMGIISALGRSQLGINIYENFIQTDAAINPGNS 236 Query: 189 GGALVDTNGNLLGINTAIYSRTGGNLGIGFAIPVSTAKTVMEAIINHGQVVRGWIGVEPQ 248 GGAL+DT+GNLLGIN+AIYSR+GG+LGIGFAIPVST KTVM++II GQVVRGWIGVEP+ Sbjct: 237 GGALIDTSGNLLGINSAIYSRSGGSLGIGFAIPVSTVKTVMDSIITKGQVVRGWIGVEPR 296 Query: 249 DITPELAESFGLTKKTGAIIAGVLKNGPADKAGMKPGDILISVENKAVTDTTEMLNLIAQ 308 DITPELA++ L+KK G IIA VLKNGPADKAG++PGDIL+SV+ K +++ EM NLIAQ Sbjct: 297 DITPELADNLSLSKKEGVIIAAVLKNGPADKAGIRPGDILVSVDEKPISNMAEMFNLIAQ 356 Query: 309 LIPGQKARMTVLRKAQETTLEIVVGKRPPLKR 340 L P KAR+TVLR A+E LEIVVGKRP KR Sbjct: 357 LQPESKARVTVLRDAKEIPLEIVVGKRPSKKR 388