BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0467.p         (143 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ISV4.1 D8ISV4_HERSS Large-conductance mechanosensitive channel      214   4e-54
A4G9H5.1 MSCL_HERAR Large-conductance mechanosensitive channel        213   6e-54
F1VX71.1 F1VX71_9BURK Large-conductance mechanosensitive channel      210   6e-53
A6T365.1 MSCL_JANMA Large-conductance mechanosensitive channel        190   6e-47
E7S0Z2.1 E7S0Z2_9BURK Large conductance mechanosensitive channel...   184   3e-45

>D8ISV4.1 D8ISV4_HERSS Large-conductance mechanosensitive channel
          Length = 145

 Score =  214 bits (544), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/143 (81%), Positives = 128/143 (89%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           M M+++FR FA+KGNVVDLAVGVIIGGAFGKIV SLV+DIIMP+VG+IFGGLDFANYYLP
Sbjct: 1   MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPIVGKIFGGLDFANYYLP 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LNGQ   L L EA+KAGAVFAYGNFLTILINFLILAFIIFQMVR INKARDLA+  + A 
Sbjct: 61  LNGQAYGLPLAEARKAGAVFAYGNFLTILINFLILAFIIFQMVRAINKARDLASKHEEAA 120

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
           PAAPA  PED++LLREIRDSLKK
Sbjct: 121 PAAPAPTPEDVLLLREIRDSLKK 143


>A4G9H5.1 MSCL_HERAR Large-conductance mechanosensitive channel
          Length = 137

 Score =  213 bits (543), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 107/143 (74%), Positives = 123/143 (86%), Gaps = 6/143 (4%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           MGMMQEF+ FA+KGNVVDLAV VIIGGAFGKIV+SLVQDIIMPVVG+IFGGLDF+NYYLP
Sbjct: 1   MGMMQEFKAFAVKGNVVDLAVAVIIGGAFGKIVDSLVQDIIMPVVGKIFGGLDFSNYYLP 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LN Q   LTL+EAKK GAVFAYG+F+TILINFLILAFIIFQMVRM++K +      ++  
Sbjct: 61  LNNQDISLTLVEAKKLGAVFAYGSFITILINFLILAFIIFQMVRMLSKLK------RSEP 114

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
           PA   A PE++VLLREIRD+LKK
Sbjct: 115 PAEAPATPEEVVLLREIRDALKK 137


>F1VX71.1 F1VX71_9BURK Large-conductance mechanosensitive channel
          Length = 139

 Score =  210 bits (534), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 125/143 (87%), Gaps = 4/143 (2%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           MGMMQEF+TFA+KGNV+DLAVGVIIG AFGKIV+S+VQD+IMP+V  IFGGLDFANYY+P
Sbjct: 1   MGMMQEFKTFAVKGNVMDLAVGVIIGAAFGKIVDSVVQDLIMPIVSTIFGGLDFANYYIP 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LNGQG QL+L+EAKKAGAV AYGNFLTI INFLILAFIIFQM+R++N AR     ++ A 
Sbjct: 61  LNGQGMQLSLVEAKKAGAVLAYGNFLTISINFLILAFIIFQMIRLVNAAR----RKQPAP 116

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
             APA  PED++LLREIRD+L+K
Sbjct: 117 APAPAVTPEDVLLLREIRDALRK 139


>A6T365.1 MSCL_JANMA Large-conductance mechanosensitive channel
          Length = 139

 Score =  190 bits (482), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/143 (71%), Positives = 118/143 (82%), Gaps = 4/143 (2%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           MGMMQEF+ FA+KGNVVDLAV VI+G AFGKIV+SLVQD+IMPVVG+IFGGLDF+NYY+ 
Sbjct: 1   MGMMQEFKEFAVKGNVVDLAVAVIVGAAFGKIVDSLVQDVIMPVVGKIFGGLDFSNYYIA 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LN Q   LTL+EAKK GAV AYGNF+TI +NF+ILAFIIFQMVR++NK +      +   
Sbjct: 61  LNNQDPNLTLVEAKKLGAVLAYGNFITIALNFIILAFIIFQMVRLLNKLK----RTEPPA 116

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
           P  PAA PEDI LLREIRDSLKK
Sbjct: 117 PEEPAAVPEDIALLREIRDSLKK 139


>E7S0Z2.1 E7S0Z2_9BURK Large conductance mechanosensitive channel protein
          Length = 146

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/147 (67%), Positives = 115/147 (78%), Gaps = 7/147 (4%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           M M+ EFR FALKGNVVDLAVGVIIGGAFGKIV+S+V+DIIMP+VG IFGGLDF++Y++P
Sbjct: 1   MSMLTEFRDFALKGNVVDLAVGVIIGGAFGKIVDSMVKDIIMPIVGAIFGGLDFSSYFIP 60

Query: 61  LNG---QGTQLTLIEAKKAG-AVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHE 116
           L     +G   T     KAG A+ AYGNFLTI +NFLILAFIIFQMV + NKA+   T  
Sbjct: 61  LTTKIPEGLPHTYEAYTKAGVAILAYGNFLTIFLNFLILAFIIFQMVNVFNKAK---TAL 117

Query: 117 KAAEPAAPAAPPEDIVLLREIRDSLKK 143
             AE + PAAPPED+VLLREIRD LKK
Sbjct: 118 IKAEASKPAAPPEDVVLLREIRDELKK 144