BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0464.p (254 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISV1.1 D8ISV1_HERSS Cytochrome c1 transmembrane protein 436 e-120 A4G9H2.1 A4G9H2_HERAR Cytochrome c1 416 e-114 A6T362.1 A6T362_JANMA Cytochrome c1 EC=1.10.2.2 410 e-113 F1VX68.1 F1VX68_9BURK Ubiquinol cytochrome C oxidoreductase, cyt... 404 e-111 A2SE24.1 A2SE24_METPP Cytochrome c1 EC=1.10.2.2 357 8e-97 >D8ISV1.1 D8ISV1_HERSS Cytochrome c1 transmembrane protein Length = 254 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/254 (82%), Positives = 231/254 (90%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 MTLLK++IA L LLPALA A+EG +PLD AP+RT DVSSLQNGAKLFVNYCLNCHSAS+M Sbjct: 1 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYNRLRD+GLTEDQIKNNL+F+GEKVGDLMK ++ PQDAKAWFGA PPDLSVIARAKAS+ Sbjct: 61 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AGSGPDWIYTYLR+YY DD+RPTGWNNM+FPNVGMPHVLWELQGIR KF EEKDPH+ Sbjct: 121 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRKAKFVEEKDPHDAS 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 KTIHKF GFEQ+KPGK++ EYDN VADLV YLQWM EPAQNTRKRLGVWVLLFLG+F V Sbjct: 181 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV 240 Query: 241 LAWRLNASFWKEVK 254 LAWRLNAS+WK +K Sbjct: 241 LAWRLNASYWKNIK 254 >A4G9H2.1 A4G9H2_HERAR Cytochrome c1 Length = 254 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 187/254 (73%), Positives = 220/254 (86%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 M LLK+LIA LVLLP LA A G +PLD+AP+ T D+++LQNGA+LFVNYCL+CHSASAM Sbjct: 1 MKLLKKLIAALVLLPGLALAAGGEFPLDRAPDHTKDLAALQNGARLFVNYCLSCHSASAM 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYN+L+D+GLTE+QIKNNLLFT +KVG +M M P+DAK WFGA PPDLSVIARAKAS Sbjct: 61 RYNKLQDIGLTEEQIKNNLLFTSDKVGSMMTIAMAPKDAKEWFGATPPDLSVIARAKASS 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AGSGPDW+YTYLRTYYKDDTR TGWNN+ FPNVGMPHVLWELQG+R KF EEKDPH+ Sbjct: 121 AGSGPDWLYTYLRTYYKDDTRATGWNNLTFPNVGMPHVLWELQGVREAKFVEEKDPHDAS 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 K +HKF GFEQ+ PGK++A+EYD +VADLV ++ WM EPAQNTRKRLGVWVLLFLG+ +V Sbjct: 181 KVVHKFAGFEQVTPGKMTALEYDKSVADLVSFMTWMAEPAQNTRKRLGVWVLLFLGVCIV 240 Query: 241 LAWRLNASFWKEVK 254 L WRLNAS+WK++K Sbjct: 241 LTWRLNASYWKDIK 254 >A6T362.1 A6T362_JANMA Cytochrome c1 EC=1.10.2.2 Length = 254 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 185/254 (72%), Positives = 221/254 (87%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 MTLLK+LIA+LVLLP L A+E +PLD AP+RT D+++LQNGA+LFVNYCL+CH+AS++ Sbjct: 1 MTLLKKLIASLVLLPGLVLASESDFPLDHAPDRTKDLAALQNGARLFVNYCLSCHAASSL 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYN+L+DLGLTE+QIKNNLLFT +KVG +M M P+DAK WFGAVPPDLSVIARAKAS Sbjct: 61 RYNKLQDLGLTEEQIKNNLLFTSDKVGGMMTIAMAPKDAKNWFGAVPPDLSVIARAKASG 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AG+G DW+YTYLR+YYKDDTR TGWNNMVFPNVGMPHVLWELQGIR KF EKDPH+ Sbjct: 121 AGTGADWLYTYLRSYYKDDTRATGWNNMVFPNVGMPHVLWELQGIRDAKFVNEKDPHDPN 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 K +HKF GFEQ+ PG L+ +EYD AVADLV ++ WM EPAQNTRKRLGVWVL+FLG+F+V Sbjct: 181 KVVHKFAGFEQVTPGLLTPLEYDKAVADLVSFMTWMAEPAQNTRKRLGVWVLMFLGVFIV 240 Query: 241 LAWRLNASFWKEVK 254 + WRLNAS+WK++K Sbjct: 241 ITWRLNASYWKDIK 254 >F1VX68.1 F1VX68_9BURK Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Length = 254 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 181/254 (71%), Positives = 218/254 (85%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 M L K+LI L +PALA ANEGG LD+AP+ TD+SSLQ+GAKLFVNYCLNCH+A++M Sbjct: 1 MKLFKKLILVLAFVPALALANEGGPKLDRAPDHATDLSSLQHGAKLFVNYCLNCHAAASM 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYNR+RD+GL+EDQIK NLLF +KVGDLMK +M P+D+K WFG VPPDLSV+ARAK+S Sbjct: 61 RYNRMRDIGLSEDQIKANLLFATDKVGDLMKVSMAPKDSKEWFGVVPPDLSVMARAKSSG 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AGSG D++YTYLRT+YKD++RPTGWNN+V+PN MPHVLWELQGIR K+ E KDPH+E Sbjct: 121 AGSGEDYLYTYLRTFYKDESRPTGWNNLVYPNAAMPHVLWELQGIREAKYVEVKDPHDES 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 KT HKF GF Q+KPGK+SA+EYD A+ DLVG++ WMGEPAQN R+RLGV VLLF+ LF+V Sbjct: 181 KTEHKFAGFTQVKPGKMSAIEYDQAIGDLVGFMSWMGEPAQNQRRRLGVIVLLFMSLFVV 240 Query: 241 LAWRLNASFWKEVK 254 +AWRLNASFWKEVK Sbjct: 241 IAWRLNASFWKEVK 254 >A2SE24.1 A2SE24_METPP Cytochrome c1 EC=1.10.2.2 Length = 255 Score = 357 bits (916), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 163/238 (68%), Positives = 197/238 (82%), Gaps = 1/238 (0%) Query: 18 AYANEGGYPLDKAP-NRTTDVSSLQNGAKLFVNYCLNCHSASAMRYNRLRDLGLTEDQIK 76 A A+EGG DK P N+ TDV+SLQ+GAKLFVNYCLNCHSA+ MRYNRL+++GL+E QIK Sbjct: 18 ARASEGGIAWDKFPQNKMTDVASLQHGAKLFVNYCLNCHSAAYMRYNRLQEIGLSEAQIK 77 Query: 77 NNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASDAGSGPDWIYTYLRTYY 136 NLLF +KVG+ MK + P+ AK WFG VPPDL+VIAR++A GSG D++YTYLR+YY Sbjct: 78 GNLLFATDKVGETMKVALDPKHAKEWFGGVPPDLTVIARSRAGAGGSGADYLYTYLRSYY 137 Query: 137 KDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEGKTIHKFVGFEQLKPGK 196 +DDT+ TGWNNMVFP+VGMPHVLWELQG R KF EE DPH+ K +H+F G+EQL PG Sbjct: 138 RDDTKATGWNNMVFPSVGMPHVLWELQGQRTAKFVEEADPHDASKKLHRFAGYEQLTPGT 197 Query: 197 LSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLVLAWRLNASFWKEVK 254 LS + YD+AV DLV YLQWMGEPAQN RKRLGVWVLLFLG+F ++AWRLNA++WK+VK Sbjct: 198 LSPLAYDDAVGDLVAYLQWMGEPAQNQRKRLGVWVLLFLGVFTIIAWRLNAAYWKDVK 255