BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0456.p         (132 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q46SQ0.1 Q46SQ0_CUPPJ Transcriptional regulator, AraC family wit...   188   2e-46
E8YQH0.1 E8YQH0_9BURK Transcriptional regulator, AraC family          179   1e-43
B2T4L1.1 B2T4L1_BURPP Transcriptional regulator, AraC family          176   1e-42
B1G9P6.1 B1G9P6_9BURK Transcriptional regulator, AraC family          174   6e-42
B2JLC7.1 B2JLC7_BURP8 Transcriptional regulator, AraC family          173   7e-42

>Q46SQ0.1 Q46SQ0_CUPPJ Transcriptional regulator, AraC family with
           amidase-like domain
          Length = 361

 Score =  188 bits (478), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/114 (76%), Positives = 100/114 (87%)

Query: 1   VTTHWDHAERLARQFPELNVRPDKIFVRDGNLFTCGGVTAGIDLCLALVAEDWGHELAIK 60
           VTTHW   +RL   FP   VRPDKIFVRDG+LFTCGGVTAGIDLCLAL+AED+GH LA+K
Sbjct: 126 VTTHWSETKRLQDHFPRAFVRPDKIFVRDGSLFTCGGVTAGIDLCLALLAEDFGHALAVK 185

Query: 61  VAKRLIVYIRREGGQSQYSPYLAVGPDEDSLVAKVLKYVTDHISDALTIEEIAD 114
           VAKRLIVYIRR+GGQSQYSPYLAVGP+EDS+V+K  +YV DHI+DA +IEE+AD
Sbjct: 186 VAKRLIVYIRRDGGQSQYSPYLAVGPEEDSIVSKARRYVDDHIADAFSIEELAD 239


>E8YQH0.1 E8YQH0_9BURK Transcriptional regulator, AraC family
          Length = 324

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 99/113 (87%)

Query: 1   VTTHWDHAERLARQFPELNVRPDKIFVRDGNLFTCGGVTAGIDLCLALVAEDWGHELAIK 60
           VTTHW  A RL+R+FP+ NV+PD+IFVRDG LFT  GVTAGIDLCL+LVAED+GHELA++
Sbjct: 124 VTTHWSDASRLSREFPQANVQPDRIFVRDGRLFTSAGVTAGIDLCLSLVAEDFGHELAVR 183

Query: 61  VAKRLIVYIRREGGQSQYSPYLAVGPDEDSLVAKVLKYVTDHISDALTIEEIA 113
           VAKRL+VYI+REGGQSQYSPY+  G DED ++ KV +YV++H++D L+IEE+A
Sbjct: 184 VAKRLVVYIQREGGQSQYSPYIGAGRDEDPIIGKVYRYVSEHLTDVLSIEELA 236


>B2T4L1.1 B2T4L1_BURPP Transcriptional regulator, AraC family
          Length = 341

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 99/113 (87%)

Query: 1   VTTHWDHAERLARQFPELNVRPDKIFVRDGNLFTCGGVTAGIDLCLALVAEDWGHELAIK 60
           VTTHW  A RLA +FP+ +V+PD+IF+RDG LFT  GVTAGIDLCL+LVAEDWGHELA++
Sbjct: 124 VTTHWADASRLADEFPQASVQPDRIFIRDGRLFTSAGVTAGIDLCLSLVAEDWGHELAVR 183

Query: 61  VAKRLIVYIRREGGQSQYSPYLAVGPDEDSLVAKVLKYVTDHISDALTIEEIA 113
            AKRL+VYI+REGGQSQYSPY+ V  D+D +V KVL+YVT+HI++AL+IE++A
Sbjct: 184 AAKRLVVYIQREGGQSQYSPYVGVRKDQDPIVGKVLRYVTEHITEALSIEQLA 236


>B1G9P6.1 B1G9P6_9BURK Transcriptional regulator, AraC family
          Length = 341

 Score =  174 bits (440), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 96/113 (84%)

Query: 1   VTTHWDHAERLARQFPELNVRPDKIFVRDGNLFTCGGVTAGIDLCLALVAEDWGHELAIK 60
           VTTHW  A RLA  FP   V+PD+IF+RDG LFT  GVTAGIDLCL+LVAEDWGHE+A++
Sbjct: 124 VTTHWADARRLADNFPLARVQPDRIFIRDGRLFTSAGVTAGIDLCLSLVAEDWGHEMAVR 183

Query: 61  VAKRLIVYIRREGGQSQYSPYLAVGPDEDSLVAKVLKYVTDHISDALTIEEIA 113
           VAKRL+VYI+REGGQSQYSPY+  G +E+ ++ KV +YVT+HI+DAL+IE++A
Sbjct: 184 VAKRLVVYIQREGGQSQYSPYIGAGKEENPIIGKVHRYVTEHITDALSIEQLA 236


>B2JLC7.1 B2JLC7_BURP8 Transcriptional regulator, AraC family
          Length = 331

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 95/113 (84%)

Query: 1   VTTHWDHAERLARQFPELNVRPDKIFVRDGNLFTCGGVTAGIDLCLALVAEDWGHELAIK 60
           VTTHW  A RLA  FP+  V+PD+IF+RDG LFT  GVTAGIDLCL+LVAEDWGHELA++
Sbjct: 124 VTTHWSDAGRLADDFPQACVQPDRIFIRDGRLFTSAGVTAGIDLCLSLVAEDWGHELAVR 183

Query: 61  VAKRLIVYIRREGGQSQYSPYLAVGPDEDSLVAKVLKYVTDHISDALTIEEIA 113
           VAKRL+VYI+REGGQSQYSPY+ V  DED ++ KV +YV DHI+D L+IE++A
Sbjct: 184 VAKRLVVYIQREGGQSQYSPYVGVRRDEDPIIGKVQRYVMDHITDVLSIEQLA 236