BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0371.p         (153 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q12HE4.1 Q12HE4_POLSJ Tetratricopeptide TPR_4                         192   2e-47
C5D1W2.1 C5D1W2_VARPS Tetratricopeptide TPR_4                         192   2e-47
E6VB85.1 E6VB85_VARPD Tetratricopeptide TPR_4                         186   8e-46
D5WLT3.1 D5WLT3_BURSC Putative uncharacterized protein                168   3e-40
B5WFW4.1 B5WFW4_9BURK Putative uncharacterized protein (Fragment)     165   2e-39

>Q12HE4.1 Q12HE4_POLSJ Tetratricopeptide TPR_4
          Length = 408

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/141 (74%), Positives = 119/141 (84%), Gaps = 3/141 (2%)

Query: 10  REALIARAFNTRRPDESHRARLRVEIGRLRALVATLAQIEATPRGFVLKPLDEREVVVLA 69
           REALI  AF T+RPDE+HRARLRVEIGRLRALV  LA IEAT RGF+LKPL  R+V VLA
Sbjct: 268 REALIESAFRTKRPDETHRARLRVEIGRLRALVKPLAAIEATERGFILKPLAGRDVAVLA 327

Query: 70  PPIAGDQAALLALLADGEAWSTSSLALALGVSQRTLQRALAGLEAAGHVRAIGQARTRRW 129
           PPI G+QA+L+ALL+DG AWSTS+LALALG SQRT+QRALA LEA G VR+IG+AR +RW
Sbjct: 328 PPIDGEQASLVALLSDGAAWSTSALALALGASQRTVQRALADLEADGRVRSIGRARAQRW 387

Query: 130 LSTPLAGGAGITTILLLPAAL 150
           L+ PL   AG TTILLLPAAL
Sbjct: 388 LAPPL---AGFTTILLLPAAL 405


>C5D1W2.1 C5D1W2_VARPS Tetratricopeptide TPR_4
          Length = 406

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/145 (74%), Positives = 121/145 (83%), Gaps = 3/145 (2%)

Query: 9   DREALIARAFNTRRPDESHRARLRVEIGRLRALVATLAQIEATPRGFVLKPLDEREVVVL 68
           DREALIA AFNTR PDE+ RARLRVEIGRLRALVA  A IEAT RGF L+P D REVVVL
Sbjct: 265 DREALIACAFNTRHPDETLRARLRVEIGRLRALVAAEAGIEATARGFALRPRDAREVVVL 324

Query: 69  APPIAGDQAALLALLADGEAWSTSSLALALGVSQRTLQRALAGLEAAGHVRAIGQARTRR 128
           APPI G+QA+L+ALL+DG AWSTS+LALAL  SQRT+QRALA LEA G VRAIG+AR +R
Sbjct: 325 APPIDGEQASLVALLSDGAAWSTSALALALDASQRTVQRALAELEAEGRVRAIGRARAQR 384

Query: 129 WLSTPLAGGAGITTILLLPAALAMD 153
           WL+ PL   AG TTILLLPAAL ++
Sbjct: 385 WLAPPL---AGFTTILLLPAALPIE 406


>E6VB85.1 E6VB85_VARPD Tetratricopeptide TPR_4
          Length = 420

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/142 (73%), Positives = 117/142 (82%), Gaps = 3/142 (2%)

Query: 9   DREALIARAFNTRRPDESHRARLRVEIGRLRALVATLAQIEATPRGFVLKPLDEREVVVL 68
           +RE LIA AFNTR PDE+ RARLRVEIGRLRALVA  A IEAT RGF LKP D REVV+L
Sbjct: 279 ERETLIAYAFNTRHPDETLRARLRVEIGRLRALVAAEAGIEATARGFALKPRDGREVVLL 338

Query: 69  APPIAGDQAALLALLADGEAWSTSSLALALGVSQRTLQRALAGLEAAGHVRAIGQARTRR 128
           APPI G+Q AL+ALL+DG AWSTS+LALAL  SQRT+QRALA LEA G VRAIG+AR +R
Sbjct: 339 APPIDGEQGALVALLSDGAAWSTSALALALDASQRTVQRALAELEAEGRVRAIGRARAQR 398

Query: 129 WLSTPLAGGAGITTILLLPAAL 150
           WL+ PL   AG TTILLLP++L
Sbjct: 399 WLAPPL---AGFTTILLLPSSL 417


>D5WLT3.1 D5WLT3_BURSC Putative uncharacterized protein
          Length = 409

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/139 (62%), Positives = 107/139 (76%), Gaps = 3/139 (2%)

Query: 10  REALIARAFNTRRPDESHRARLRVEIGRLRALVATLAQIEATPRGFVLKPLDEREVVVLA 69
           R+AL+ARAF  +R DESHRARLRVEIGRLRA + TLA + AT RGF L+P   REVVVLA
Sbjct: 270 RDALVARAFRAKRADESHRARLRVEIGRLRAALGTLASVSATTRGFALEPRHAREVVVLA 329

Query: 70  PPIAGDQAALLALLADGEAWSTSSLALALGVSQRTLQRALAGLEAAGHVRAIGQARTRRW 129
           PP+ G+ AALLA L+DGE+WS+S+LAL LG SQRT+QR+L  L  AG V+ +G+ R RRW
Sbjct: 330 PPVEGEHAALLAFLSDGESWSSSALALVLGASQRTVQRSLDSLAEAGKVQPVGEGRARRW 389

Query: 130 LSTPLAGGAGITTILLLPA 148
           ++ PL   AG  T LLLP+
Sbjct: 390 MTPPL---AGFATALLLPS 405


>B5WFW4.1 B5WFW4_9BURK Putative uncharacterized protein (Fragment)
          Length = 344

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/139 (63%), Positives = 106/139 (76%), Gaps = 3/139 (2%)

Query: 10  REALIARAFNTRRPDESHRARLRVEIGRLRALVATLAQIEATPRGFVLKPLDEREVVVLA 69
           R+ L+ARAF  +R DESHRARLRVEIGRLRA + TLA + AT RGF L P   REVVVLA
Sbjct: 205 RDTLVARAFRAKRADESHRARLRVEIGRLRAALGTLASVRATTRGFELAPRHAREVVVLA 264

Query: 70  PPIAGDQAALLALLADGEAWSTSSLALALGVSQRTLQRALAGLEAAGHVRAIGQARTRRW 129
           PP+ G+ AALLA L+DGE+WS+S+LAL LG SQRT+QRAL  L AAG V+ +G  R RRW
Sbjct: 265 PPVEGEHAALLAFLSDGESWSSSALALVLGASQRTVQRALDTLAAAGKVQPVGDGRARRW 324

Query: 130 LSTPLAGGAGITTILLLPA 148
           ++ P+AG A   T LLLP+
Sbjct: 325 MTPPIAGFA---TALLLPS 340