BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0360.p (1141 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B2JWV2.1 B2JWV2_BURP8 Signal transduction histidine kinase with ... 1142 0.0 D5WM70.1 D5WM70_BURSC Signal transduction histidine kinase with ... 1134 0.0 B5WFQ3.1 B5WFQ3_9BURK Signal transduction histidine kinase with ... 1124 0.0 B3R933.1 B3R933_CUPTR Putative chemotaxis methyltransferase prot... 1123 0.0 Q46RH1.1 Q46RH1_CUPPJ PAS 1119 0.0 >B2JWV2.1 B2JWV2_BURP8 Signal transduction histidine kinase with CheB and CheR activity Length = 1361 Score = 1142 bits (2954), Expect = 0.0, Method: Compositional matrix adjust. Identities = 610/1155 (52%), Positives = 786/1155 (68%), Gaps = 37/1155 (3%) Query: 1 LISIMDLLRTRSGHDFSHYKKATVLRRIERRMQVSRTASLQEYFRYLTTHPDETPSLLQD 60 L IM +LRTR+GHDF HYK+ATVLRRIERRMQV+ LQ Y +L H DET +LLQD Sbjct: 226 LREIMVILRTRTGHDFRHYKRATVLRRIERRMQVNGITDLQAYRDHLHLHQDETQALLQD 285 Query: 61 MLISVTNFFRDRESFETLEREYIPAIFAGAEKGAPIRVWSAGCASGEEAYSLGMLLAEQR 120 MLISVTNFFRD+E+FE LERE +P +F G + IR WS GCA+GEEAYSL MLL E+ Sbjct: 286 MLISVTNFFRDKEAFEVLEREVLPQLFEGRGEQDRIRTWSVGCATGEEAYSLAMLLQERS 345 Query: 121 ALLNSSVDIQVFATDIDDRAISIARQGLYPESIVTDVAPGKLRQFFIREDGHYRIKKTLR 180 V QVFATDID+RAIS AR GLYP+SI+ DV+ ++RQFF ++ HYR+KK LR Sbjct: 346 LKSAEGVSFQVFATDIDERAISFARAGLYPDSILADVSTSRVRQFFSKDAAHYRVKKELR 405 Query: 181 EKVLFAAHNILRDPPFSRVHLISCRNLLIYLNREVQEKVFEMFHFALVPGGYLYLGSSES 240 E +LFA HN+L DPPFSR+ LI CRNLLIYL+RE Q ++ +MFHFAL PGG L+LGSSES Sbjct: 406 EHMLFAHHNVLSDPPFSRLDLICCRNLLIYLDREAQIEILKMFHFALRPGGVLFLGSSES 465 Query: 241 AEVASKYFTPVDKKNRIYRAVVMTHGAHYVPPLPYRRHGAPEIRNYIEVESRPAVR---Y 297 A+ S F+ +DK+NRIYRA + G P+P G R + P R + Sbjct: 466 ADSVSSMFSVIDKRNRIYRANMAVRGD---TPVPVAISGMASARPVVATVQPPGRRRFSF 522 Query: 298 AELHQRLIEQYAPPSVLINRTGEVVHVSKTAGIYLRYPTGEPSHDLVALIIPELRLELRT 357 +LHQRL+EQYAPPSVL++R E+VH+S AG +L+Y GEPSH++VA++ PELRLELRT Sbjct: 523 GDLHQRLVEQYAPPSVLVSRDSEIVHLSDRAGRFLQYSGGEPSHNIVAVVRPELRLELRT 582 Query: 358 ALFQVQQNNTNAETRQVSVERDGKRSNIALTLRIIPDEGLQNQFILILFNESATDEPIDH 417 A++Q N + E R+V +E +G+ + +T R + D F+L+LF+E ++ + Sbjct: 583 AIYQALHTNRSVEARRVRIEHEGRSYFVNMTARPVHDPEANADFVLVLFDE--VEDSMGG 640 Query: 418 HEESGTSF----IAKQLENELFITKGQLQTTIEQYETSAEELKASNEELQAINEELRSTT 473 E S + I QLE EL TK QLQ+TIEQ ETS EELKASNEELQAINEELRS T Sbjct: 641 SETSASDAQKDPIISQLERELQRTKEQLQSTIEQSETSTEELKASNEELQAINEELRSAT 700 Query: 474 EELETSKEELQSINEELITVNHELKMKVDETGKSNDDLQNFISATEIATIFVDRSMRIKR 533 EELETSKEELQSINEEL TVN ELK KV+ETGK NDDLQN I+A +I TIFVDR++ IKR Sbjct: 701 EELETSKEELQSINEELTTVNAELKSKVEETGKINDDLQNLIAANDIGTIFVDRNICIKR 760 Query: 534 YTPRSADIFKLIPTDVGRPLLDISHRLEYELLEEDAARVFETLRPCEREVKSDTGHRYIA 593 YTPR+ D+F +IP+D+GR LLDI+HRLEY+ L +DAA F++LR ERE+KS+ G Y+A Sbjct: 761 YTPRATDVFSIIPSDIGRSLLDITHRLEYDKLADDAAEAFDSLRLIERELKSNDGRWYLA 820 Query: 594 RLIPYRTNEDQISGLVLTFIDITSLHLAQSKLAAEELRMRVVAASTRDYAIITMDPTGKI 653 R +PYRT ED+I G VL+FIDIT A+ +L E RMR+VA T+DYAIIT D G + Sbjct: 821 RFVPYRTTEDRIDGAVLSFIDITGRRQAEDRLREGERRMRIVAEGTKDYAIITFDDEGLV 880 Query: 654 TFWNNGAERIFGYSEEEILGQHLDRIFTPEDRDNLVPAQELTTAKKEGHASDERWHLRKD 713 T WN GAERIFGY+E E++GQ D + T EDR + + E A+ G +ERWH+RKD Sbjct: 881 TSWNAGAERIFGYTEAEMIGQSADMLSTEEDRASNIAQAEFAEARLNGRTEEERWHVRKD 940 Query: 714 GTKVFCSGILTRLDDEEMTGYAKIARDLTSSKELETKREARLALETATRLKAEEAVRLRE 773 GT+ F SG+L+RLD+ ++G+AKIARDL + T E ET +A R R+ Sbjct: 941 GTRFFASGVLSRLDEAGVSGFAKIARDLGEFGHVATT-ERGSHTETLRAAAERDAQRRRD 999 Query: 774 EFLAVLSHELKHPLNLIQLNAELLKRIPLTQDQGKITRIADVIRSTVQTQAKIIDDLLDL 833 EFLAV+SHELKHPLNLI +AEL+ R P T+ I+R AD IR TV QA+IIDDLLD+ Sbjct: 1000 EFLAVVSHELKHPLNLISASAELIARAPETRQSLNISRAADTIRRTVIGQAQIIDDLLDI 1059 Query: 834 SRAQTGKLTLRKTLVDIVGITEKITRVFETDTQNKGIELRYQSAVPSLLVFGDTTRLEQI 893 SR +TGKL++ +T VD+ I +++ + D + +G+ L A +++ D TR+EQ+ Sbjct: 1060 SRVRTGKLSIIRTAVDMREIVQRVCNAVQDDARQRGLTLNVTMAESPVIIHADLTRVEQV 1119 Query: 894 LWNLLSNAVKFTPSGGKIFVTLGV-EGSNALITVSDSGKGISSHFLPHIFRMFEQA-DAV 951 +WNL+SNA+KFT + G + V+L V E A++ VSD+GKGI LPHIF MFEQ+ D V Sbjct: 1120 VWNLVSNAMKFT-NRGSVDVSLRVNEHGEAVLRVSDTGKGIEPSLLPHIFEMFEQSRDPV 1178 Query: 952 TTREHGGLGIGLALVRQLAESHGGRVEVESGGLEKGAKFSVWLPLY---------DGDHA 1002 T R GLGIGLALVR+L HGG V ES G+ +G+ F+V LP + DGD A Sbjct: 1179 TRR--SGLGIGLALVRELVNLHGGAVRAESEGVGRGSTFTVTLPTHRTLSYASGADGDAA 1236 Query: 1003 DAPLQPIDEDLDLLHGKTLLLIDDHIENLETLRDLLSSHGAIVTAKSSGVEALAETARRQ 1062 +D L G +L++DD ET + LL S GAIV +SG EALA Sbjct: 1237 ----------VDSLRGVRVLMVDDDAATTETFKLLLESEGAIVKTAASGEEALAMLNGDV 1286 Query: 1063 FDLVVSDIAMPKMDGYQFIALLRKQPQGSAVPVIALTGFGRAIDVQTAMESGFTAHLQKP 1122 D+V+SDI M MDG +F+ LR++P +V IAL+GFG+ DV+ A +GF AHL+KP Sbjct: 1287 PDVVLSDIGMHGMDGLEFVGKLREEPGLKSVICIALSGFGQEADVKMAENAGFDAHLKKP 1346 Query: 1123 IDLKNFAEIVKNIFH 1137 + L++ +V + H Sbjct: 1347 VMLEDLLHVVSRLRH 1361 >D5WM70.1 D5WM70_BURSC Signal transduction histidine kinase with CheB and CheR activity Length = 1360 Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 602/1140 (52%), Positives = 775/1140 (67%), Gaps = 20/1140 (1%) Query: 1 LISIMDLLRTRSGHDFSHYKKATVLRRIERRMQVSRTASLQEYFRYLTTHPDETPSLLQD 60 L IM +LRTR+ HDF HYK+ATVLRRIERR+QV+ LQ Y YL HP+ET +LLQD Sbjct: 226 LREIMVILRTRTAHDFRHYKRATVLRRIERRLQVNGITDLQAYRDYLHLHPEETQALLQD 285 Query: 61 MLISVTNFFRDRESFETLEREYIPAIFAGAEKGAPIRVWSAGCASGEEAYSLGMLLAEQR 120 MLISVTNFFRD+E+F+ LERE +PA+F + IRVWS GCA+GEEAYSL MLL E+ Sbjct: 286 MLISVTNFFRDKEAFDVLEREVLPALFENRGEPDRIRVWSVGCATGEEAYSLAMLLQERS 345 Query: 121 ALLNSSVDIQVFATDIDDRAISIARQGLYPESIVTDVAPGKLRQFFIREDGHYRIKKTLR 180 V QVFATDID+RAIS AR GLYP+SI D+ P ++RQFF ++ H+RIKK LR Sbjct: 346 LKSPEGVSFQVFATDIDERAISFARIGLYPDSISADLTPARIRQFFTKDAAHFRIKKELR 405 Query: 181 EKVLFAAHNILRDPPFSRVHLISCRNLLIYLNREVQEKVFEMFHFALVPGGYLYLGSSES 240 E +LFA HN+L DPPFSR+ +I CRNLLIYL+RE Q ++ +MFHFAL PGG L+LGSSES Sbjct: 406 EHMLFAHHNVLSDPPFSRLDMICCRNLLIYLDREAQIEILKMFHFALRPGGVLFLGSSES 465 Query: 241 AEVASKYFTPVDKKNRIYRAVVMTHGAHYVPPLPYRRHGAPEIRNYIEVESRPAVR---Y 297 A+ S FT VDK+NRIYRA + G P+P G R + P R + Sbjct: 466 ADSVSSMFTVVDKRNRIYRANMAVRGD---TPVPIAISGTMSSRPLVTTVQPPGRRRFSF 522 Query: 298 AELHQRLIEQYAPPSVLINRTGEVVHVSKTAGIYLRYPTGEPSHDLVALIIPELRLELRT 357 +LHQRL+EQYAPPSVL++R E+VH+S AG +L+Y GEPSH++VA++ PELRLELRT Sbjct: 523 GDLHQRLVEQYAPPSVLVSRESEIVHLSDRAGRFLQYSGGEPSHNIVAVVRPELRLELRT 582 Query: 358 ALFQVQQNNTNAETRQVSVERDGKRSNIALTLRIIPDEGLQNQFILILFNESATDEPIDH 417 A++Q N + E R+V +ERDG+ + +T R + D F+L+LF+E ++ + + Sbjct: 583 AIYQALHTNRSVEARRVRIERDGRSYFVNMTARPVHDPEANADFVLVLFDE--VEDSMAN 640 Query: 418 HEESGTSF----IAKQLENELFITKGQLQTTIEQYETSAEELKASNEELQAINEELRSTT 473 E + I QLE EL TK QLQ+TIEQ ETS EELKASNEELQAINEELRS T Sbjct: 641 AETASVDVQKDPIISQLERELQRTKEQLQSTIEQSETSTEELKASNEELQAINEELRSAT 700 Query: 474 EELETSKEELQSINEELITVNHELKMKVDETGKSNDDLQNFISATEIATIFVDRSMRIKR 533 EELETSKEELQSINEEL TVN ELK KV+ETGK NDDL N I+A +I TIFVDR++ IKR Sbjct: 701 EELETSKEELQSINEELTTVNAELKSKVEETGKINDDLHNLIAANDIGTIFVDRNICIKR 760 Query: 534 YTPRSADIFKLIPTDVGRPLLDISHRLEYELLEEDAARVFETLRPCEREVKSDTGHRYIA 593 YTPR+ D+F +IP+D+GR LLDI+HRLEY+ L +DAA F++LR ERE+KS+ G Y+A Sbjct: 761 YTPRATDVFSIIPSDIGRSLLDITHRLEYDKLADDAAEAFDSLRLIERELKSNDGRWYLA 820 Query: 594 RLIPYRTNEDQISGLVLTFIDITSLHLAQSKLAAEELRMRVVAASTRDYAIITMDPTGKI 653 R +PYRT ED+I G VL+FIDIT A+ +L E RMR+VA T+DYAIIT D G I Sbjct: 821 RFVPYRTTEDRIDGAVLSFIDITGRRQAEDRLREGERRMRIVAEGTKDYAIITFDENGVI 880 Query: 654 TFWNNGAERIFGYSEEEILGQHLDRIFTPEDRDNLVPAQELTTAKKEGHASDERWHLRKD 713 WN GAERIFGYSE E++GQ D ++T EDR V +E A+ G A +ERWHLRKD Sbjct: 881 NSWNAGAERIFGYSEAEMIGQSADILYTDEDRAANVAKREFAEARLNGRAEEERWHLRKD 940 Query: 714 GTKVFCSGILTRLDDEEMTGYAKIARDLTSSKELETKREARLALETATRLKAEEAVRLRE 773 GT+ F SG+L+RLD+ ++G+AKI RDL T +ET EA R R+ Sbjct: 941 GTRFFASGVLSRLDEPGISGFAKITRDLGEFASDATSGRG-THVETLRAASEREAQRRRD 999 Query: 774 EFLAVLSHELKHPLNLIQLNAELLKRIPLTQDQGKITRIADVIRSTVQTQAKIIDDLLDL 833 EFLAV+SHELKHPLNLI +AEL+ R P T+ ++R D IR TV QA+IIDDLLD+ Sbjct: 1000 EFLAVVSHELKHPLNLISASAELIARAPETRQNLNVSRATDTIRRTVIGQAQIIDDLLDI 1059 Query: 834 SRAQTGKLTLRKTLVDIVGITEKITRVFETDTQNKGIELRYQSAVPSLLVFGDTTRLEQI 893 SR +TGKL++ +T+VD+ I +++ + D +GI L + +++ D TR+EQI Sbjct: 1060 SRVRTGKLSVVRTVVDMREIVQRVCSAVQDDAAQRGITLSVEVTDAPVIIHADLTRIEQI 1119 Query: 894 LWNLLSNAVKFTPSGGKIFVTLGV-EGSNALITVSDSGKGISSHFLPHIFRMFEQADAVT 952 +WNL+SNA+KFT G I V+L V + + A++ VSD+G GI + LPHIF MF+Q+ Sbjct: 1120 VWNLISNALKFTQR-GSIQVSLQVNDHAEAVLRVSDTGTGIEASLLPHIFEMFQQSRDPG 1178 Query: 953 TREHGGLGIGLALVRQLAESHGGRVEVESGGLEKGAKFSVWLPLYD-GDHADAPLQPIDE 1011 +R GGLGIGLALVR L HGG V ES G+ +GA F+V LP + A ++ E Sbjct: 1179 SR-RGGLGIGLALVRDLVNLHGGAVRAESDGVGRGATFTVTLPTHRLATRTSAGIEITGE 1237 Query: 1012 DLDLLHGKTLLLIDDHIENLETLRDLLSSHGAIVTAKSSGVEALAETARRQFDLVVSDIA 1071 L G +L++DD +ET + LL S GA V +SG EAL D+++SDI Sbjct: 1238 P---LKGTRILMVDDDAATVETFKLLLESEGAEVRTATSGEEALTIINGNAPDIILSDIG 1294 Query: 1072 MPKMDGYQFIALLRKQPQGSAVPVIALTGFGRAIDVQTAMESGFTAHLQKPIDLKNFAEI 1131 MP MDG +F+ LR P +V IA++GFG+ DV A ++GF AHL+KP+ L++ I Sbjct: 1295 MPGMDGMEFVGKLRGMPAMKSVICIAVSGFGQQADVSAAEDAGFDAHLKKPVVLEDLLSI 1354 >B5WFQ3.1 B5WFQ3_9BURK Signal transduction histidine kinase with CheB and CheR activity Length = 1360 Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 602/1139 (52%), Positives = 774/1139 (67%), Gaps = 24/1139 (2%) Query: 1 LISIMDLLRTRSGHDFSHYKKATVLRRIERRMQVSRTASLQEYFRYLTTHPDETPSLLQD 60 L IM +LRTR+ HDF HYK+ATVLRRIERR+QV+ LQ Y YL HP+ET +LLQD Sbjct: 226 LREIMVILRTRTAHDFRHYKRATVLRRIERRLQVNGITDLQAYRDYLHLHPEETQALLQD 285 Query: 61 MLISVTNFFRDRESFETLEREYIPAIFAGAEKGAPIRVWSAGCASGEEAYSLGMLLAEQR 120 MLISVTNFFRD+E+F+ LERE +P +F + IRVWS GCA+GEEAYSL MLL E+ Sbjct: 286 MLISVTNFFRDKEAFDVLEREVLPPLFEHRGEQDRIRVWSVGCATGEEAYSLAMLLQERS 345 Query: 121 ALLNSSVDIQVFATDIDDRAISIARQGLYPESIVTDVAPGKLRQFFIREDGHYRIKKTLR 180 V QVFATDID+RAIS AR GLYP+SI D+ P ++RQFF ++ HYRIKK LR Sbjct: 346 LKSPEGVSFQVFATDIDERAISFARVGLYPDSISADLTPARIRQFFTKDAAHYRIKKELR 405 Query: 181 EKVLFAAHNILRDPPFSRVHLISCRNLLIYLNREVQEKVFEMFHFALVPGGYLYLGSSES 240 E +LFA HN+L DPPFSR+ +I CRNLLIYL+RE Q ++ MFHFAL PGG L+LGSSES Sbjct: 406 EHMLFAHHNVLSDPPFSRLDMICCRNLLIYLDREAQIEILRMFHFALRPGGILFLGSSES 465 Query: 241 AEVASKYFTPVDKKNRIYRAVVMTHGAHYVPPLPYRRHGAPEIRNYIEVESRPAVR---Y 297 A+ S FT VDK++RIYRA + G P+P G R + P R + Sbjct: 466 ADSVSSMFTVVDKRSRIYRANMAVRGD---TPVPIAISGTMSSRPVVTTLQPPGRRRFSF 522 Query: 298 AELHQRLIEQYAPPSVLINRTGEVVHVSKTAGIYLRYPTGEPSHDLVALIIPELRLELRT 357 +LHQRL+EQYAPPSVL++R E+VH+S AG +L+Y GEPSH++VA++ PELRLELRT Sbjct: 523 GDLHQRLVEQYAPPSVLVSRDSEIVHLSDRAGRFLQYSGGEPSHNIVAVVRPELRLELRT 582 Query: 358 ALFQVQQNNTNAETRQVSVERDGKRSNIALTLRIIPDEGLQNQFILILFNESATDEPIDH 417 A++Q N + E R+V +ER+G+ + +T R + D F+L+LF+E ++ + + Sbjct: 583 AIYQALHTNRSVEARRVRIEREGRSYFVNMTARPVHDPEANADFVLVLFDE--VEDSMGN 640 Query: 418 HEESGTSF----IAKQLENELFITKGQLQTTIEQYETSAEELKASNEELQAINEELRSTT 473 E + I QLE EL TK QLQ+TIEQ ETS EELKASNEELQAINEELRS T Sbjct: 641 AETASVDVQKDPIISQLERELQRTKEQLQSTIEQSETSTEELKASNEELQAINEELRSAT 700 Query: 474 EELETSKEELQSINEELITVNHELKMKVDETGKSNDDLQNFISATEIATIFVDRSMRIKR 533 EELETSKEELQSINEEL TVN ELK KV+ETGK NDDL N I+A +I TIFVDR++ IKR Sbjct: 701 EELETSKEELQSINEELTTVNAELKSKVEETGKINDDLHNLIAANDIGTIFVDRNICIKR 760 Query: 534 YTPRSADIFKLIPTDVGRPLLDISHRLEYELLEEDAARVFETLRPCEREVKSDTGHRYIA 593 YTPR+ D+F +IP+D+GR LLDI+HRLEY+ L +DAA F++LR ERE+KS G Y+A Sbjct: 761 YTPRATDVFSIIPSDIGRSLLDITHRLEYDKLADDAAEAFDSLRLIERELKSSDGRWYLA 820 Query: 594 RLIPYRTNEDQISGLVLTFIDITSLHLAQSKLAAEELRMRVVAASTRDYAIITMDPTGKI 653 R +PYRT ED+I G VL+FIDIT A+ +L E RMR+V STRDYAIIT D +G I Sbjct: 821 RFVPYRTTEDRIDGAVLSFIDITGRRQAEDRLREGERRMRIVGESTRDYAIITFDDSGVI 880 Query: 654 TFWNNGAERIFGYSEEEILGQHLDRIFTPEDRDNLVPAQELTTAKKEGHASDERWHLRKD 713 WN AERIFGYSE E++GQ + ++T EDR V +EL A+ G A +E WHLRKD Sbjct: 881 NSWNAAAERIFGYSEAEMIGQSAEILYTNEDRAANVAQRELAEARLNGRAEEECWHLRKD 940 Query: 714 GTKVFCSGILTRLDDEEMTGYAKIARDLTSSKELETKREARLALETATRLKAEE--AVRL 771 GT+ F SG+L+RLD+ ++G+AKI RDL E T + + A E A R Sbjct: 941 GTRFFASGVLSRLDEPGISGFAKITRDL---GEFATDPASGRGTHVESLRAASERDAQRR 997 Query: 772 REEFLAVLSHELKHPLNLIQLNAELLKRIPLTQDQGKITRIADVIRSTVQTQAKIIDDLL 831 R+EFLA++SHELKHPLNLI +AEL+ R P T+ ++R D IR TV QA+IIDDLL Sbjct: 998 RDEFLAIVSHELKHPLNLISASAELIARAPETRHNLNVSRATDTIRRTVIGQAQIIDDLL 1057 Query: 832 DLSRAQTGKLTLRKTLVDIVGITEKITRVFETDTQNKGIELRYQSAVPSLLVFGDTTRLE 891 D+SR +TGKL++ +T+VD+ I +++ + D +G+ LR + A ++V D TR+E Sbjct: 1058 DISRVRTGKLSVVRTVVDVREIVQRVCSAVQDDAAQRGVALRVELADTPVIVHADLTRIE 1117 Query: 892 QILWNLLSNAVKFTPSGGKIFVTLGV-EGSNALITVSDSGKGISSHFLPHIFRMFEQADA 950 QI+WNL+SNA+KFT G I V+L V + + A++ VSD+G GI LPHIF MF+Q+ Sbjct: 1118 QIVWNLISNALKFTQR-GTIDVSLQVNDHAEAVLRVSDTGSGIEPSLLPHIFDMFQQSRD 1176 Query: 951 VTTREHGGLGIGLALVRQLAESHGGRVEVESGGLEKGAKFSVWLPLYD-GDHADAPLQPI 1009 TR GGLGIGLALVR L HGG V ES G+ +GA F+V LP + A ++ Sbjct: 1177 PGTR-RGGLGIGLALVRDLVNLHGGAVRAESDGVGRGATFTVTLPTHRLARRTSAGIELT 1235 Query: 1010 DEDLDLLHGKTLLLIDDHIENLETLRDLLSSHGAIVTAKSSGVEALAETARRQFDLVVSD 1069 E L +H +L++DD +ET + LL S GA V +SG EAL D+++SD Sbjct: 1236 AESLKGMH---ILMVDDDSATVETFKLLLESEGAEVHTATSGEEALTIIDGNAPDVILSD 1292 Query: 1070 IAMPKMDGYQFIALLRKQPQGSAVPVIALTGFGRAIDVQTAMESGFTAHLQKPIDLKNF 1128 I MP MDG++FI LR P +V IA++GFG+ DV A E+GF AHL+KP+ L+ Sbjct: 1293 IGMPGMDGFEFIGKLRGMPAMKSVLCIAVSGFGQQADVSAAEEAGFDAHLRKPVVLEEL 1351 >B3R933.1 B3R933_CUPTR Putative chemotaxis methyltransferase protein; contains Methylesterase domain (CheB), Methylase of chemotaxis methyl-accepting proteins domain (CheR), signal transduction histidine domain (NitrB), signal receiver (Rec) domain EC=2.1.1.80 EC=3.1.1.61 Length = 1373 Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 594/1145 (51%), Positives = 763/1145 (66%), Gaps = 35/1145 (3%) Query: 1 LISIMDLLRTRSGHDFSHYKKATVLRRIERRMQVSRTASLQEYFRYLTTHPDETPSLLQD 60 L IM +LRTR+ HDF HYK+ATVLRRIERR+QV+ LQ+Y YL HP+ETP+LLQD Sbjct: 231 LREIMVILRTRTSHDFRHYKRATVLRRIERRLQVNGLTDLQQYRDYLHLHPEETPALLQD 290 Query: 61 MLISVTNFFRDRESFETLEREYIPAIFAGAEKGAPIRVWSAGCASGEEAYSLGMLLAEQR 120 MLISVTNFFRD+E+F+ L + +P +F +G IR W+ GCA+GEEAYSL MLL E Sbjct: 291 MLISVTNFFRDKEAFDALRAQVLPQLFENRTEGEVIRAWTPGCATGEEAYSLAMLLHEAS 350 Query: 121 ALLNSSVDIQVFATDIDDRAISIARQGLYPESIVTDVAPGKLRQFFIREDGHYRIKKTLR 180 A V QVFATDID+RA++IAR GLYPE IV DV P ++RQFF +E H R++K LR Sbjct: 351 AQTAEQVRFQVFATDIDERAVAIARNGLYPEPIVADVDPARIRQFFTKEAAHLRVRKELR 410 Query: 181 EKVLFAAHNILRDPPFSRVHLISCRNLLIYLNREVQEKVFEMFHFALVPGGYLYLGSSES 240 E+VLFA HN+L DPPFSR+ LI CRNLLIY++R+ Q + FHFAL PGGYL+LG+SE+ Sbjct: 411 ERVLFALHNVLSDPPFSRLDLICCRNLLIYVDRDAQADILRTFHFALRPGGYLFLGNSEA 470 Query: 241 AEVASKYFTPVDKKNRIYRAVVMTHGAHYVPPLPYRRHGAPEIRNYIEVESRPAVR---Y 297 A+ S F+ VDKK RIYRA V P+P G RN + V P R + Sbjct: 471 ADSVSNLFSVVDKKARIYRANVAVRSD---TPMPMAIAGMAAARNPVSVLPAPGKRKFSF 527 Query: 298 AELHQRLIEQYAPPSVLINRTGEVVHVSKTAGIYLRYPTGEPSHDLVALIIPELRLELRT 357 +LHQRLIEQ+APPSVL++R E+VH+S AG +L+Y GEPSH+++A++ PELRLELRT Sbjct: 528 GDLHQRLIEQHAPPSVLVSRESEIVHLSDRAGRFLQYVGGEPSHNIIAVVRPELRLELRT 587 Query: 358 ALFQVQQNNTNAETRQVSVERDGKRSNIALTLRIIPDEGLQNQFILILFNE---SATDEP 414 A++Q Q N + E R+V +ERDGK + +T R + D F+L+LF+E S + P Sbjct: 588 AIYQALQTNHSVEARRVLLERDGKHFFVNMTARPVHDVEANGDFVLVLFDEVEDSMSAAP 647 Query: 415 IDHHEESGTSFIAKQLENELFITKGQLQTTIEQYETSAEELKASNEELQAINEELRSTTE 474 E IA QLE EL TK QLQ TIEQ ETS EELKASNEELQAINEELRS TE Sbjct: 648 TGQPGEERDPMIA-QLERELQRTKEQLQATIEQSETSTEELKASNEELQAINEELRSATE 706 Query: 475 ELETSKEELQSINEELITVNHELKMKVDETGKSNDDLQNFISATEIATIFVDRSMRIKRY 534 ELETSKEELQSINEEL TVN ELK KV+ETGK NDDLQN I+A +I T+FVDRSM IKRY Sbjct: 707 ELETSKEELQSINEELTTVNAELKSKVEETGKINDDLQNLITANDIGTVFVDRSMCIKRY 766 Query: 535 TPRSADIFKLIPTDVGRPLLDISHRLEYELLEEDAARVFETLRPCEREVKSDTGHRYIAR 594 TPR+ D+F +IP+D+GR LLDI+HRLEY+ L +DAA F++LR EREV+S+ G Y+AR Sbjct: 767 TPRAIDVFSIIPSDIGRSLLDITHRLEYDKLADDAAEAFDSLRLIEREVRSNDGRWYLAR 826 Query: 595 LIPYRTNEDQISGLVLTFIDITSLHLAQSKLAAEELRMRVVAASTRDYAIITMDPTGKIT 654 +PYRT ED+I G VL+FIDITS A+ +L E RM +VA STRDYAIIT D G++T Sbjct: 827 FLPYRTTEDRIDGAVLSFIDITSRRAAEERLREGEKRMNIVAESTRDYAIITFDDQGRVT 886 Query: 655 FWNNGAERIFGYSEEEILGQHLDRIFTPEDRDNLVPAQELTTAKKEGHASDERWHLRKDG 714 WN GAERIFG E ++LGQ + ++TPEDR VP +EL A+ G ++RWH+R+DG Sbjct: 887 SWNTGAERIFGVGEADMLGQPAETLYTPEDRAAGVPKEELAQARMYGRIEEDRWHVRRDG 946 Query: 715 TKVFCSGILTRLDDEEMTGYAKIARDLTSSKELE----TKREARLALETATRLKAEEAV- 769 ++ +G+L+RLD ++G+AKI RDL EL R A + TR E++ Sbjct: 947 SRFRSTGVLSRLDKGGVSGFAKILRDL---DELALTRIATRPASGSEVAGTRGPGNESLE 1003 Query: 770 ----RLREEFLAVLSHELKHPLNLIQLNAELLKRIPLTQDQGKITRIADVIRSTVQTQAK 825 RLR+EFLAV+SHELKHPLNLI +AEL+ R P + I R A IR TV QA Sbjct: 1004 GRAERLRDEFLAVVSHELKHPLNLISASAELISRAPDARASDVIQRAAATIRRTVMGQAH 1063 Query: 826 IIDDLLDLSRAQTGKLTLRKTLVDIVGITEKITRVFETDTQNKGIELRYQSAVPSLLVFG 885 IIDDLLD+SR +TGKL++ +D + +++ E + K I L +++ Sbjct: 1064 IIDDLLDMSRLRTGKLSIAHAPLDWAEVVDRVCSAIEEEVARKQIVLERSLPDGPVMIDA 1123 Query: 886 DTTRLEQILWNLLSNAVKFTPSGGKIFVTLGVEGSNALITVSDSGKGISSHFLPHIFRMF 945 D TR+EQI+WNL+SNA+K+T +GG I V+L A++ V D+G GI + LPHIF MF Sbjct: 1124 DLTRIEQIVWNLVSNAIKYTSAGGLINVSLTRTDGTAVLAVRDTGAGIDAQSLPHIFDMF 1183 Query: 946 EQADAVTTREHGGLGIGLALVRQLAESHGGRVEVESGGLEKGAKFSVWLP-----LYDGD 1000 Q A T R+ GGLGIGL+LVR+L GG V ES G KGA F+V P L + D Sbjct: 1184 RQGAAPTARK-GGLGIGLSLVRELVTIQGGTVRAESEGQGKGALFTVSFPVCANVLLNAD 1242 Query: 1001 HADAPLQPIDEDLDLLHGKTLLLIDDHIENLETLRDLLSSHGAIVTAKSSGVEALAETAR 1060 +P L T+LL+DD +ET + LL GA V+ +S +AL + Sbjct: 1243 ATQTSARP-------LQDTTILLVDDDSGTVETFKLLLEMEGARVSVATSAQDALRQLET 1295 Query: 1061 RQFDLVVSDIAMPKMDGYQFIALLRKQPQGSAVPVIALTGFGRAIDVQTAMESGFTAHLQ 1120 + DL++SDI MP MDG +FI +R + S + AL+G+GR D++ +M +GF AHL Sbjct: 1296 MRPDLLLSDIGMPDMDGLEFIKAIRNNERLSTLTAFALSGYGRPDDIRRSMHAGFDAHLT 1355 Query: 1121 KPIDL 1125 KP+ L Sbjct: 1356 KPVSL 1360 >Q46RH1.1 Q46RH1_CUPPJ PAS Length = 1384 Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 597/1144 (52%), Positives = 758/1144 (66%), Gaps = 40/1144 (3%) Query: 1 LISIMDLLRTRSGHDFSHYKKATVLRRIERRMQVSRTASLQEYFRYLTTHPDETPSLLQD 60 L IM +LRTR+ HDF YK+ATVLRRIERRMQV+ + L EY +L HP+ETP LLQD Sbjct: 255 LREIMVILRTRTSHDFRQYKRATVLRRIERRMQVNGLSELSEYRDFLHGHPEETPLLLQD 314 Query: 61 MLISVTNFFRDRESFETLEREYIPAIFAGAE-KGAPIRVWSAGCASGEEAYSLGMLLAEQ 119 MLISVTNFFRDRE+F+ L E +P I +G PIRVWSAGCA+GEEAYS+ MLL E Sbjct: 315 MLISVTNFFRDREAFDALRNEVLPQIIENRRTEGDPIRVWSAGCATGEEAYSIAMLLQEA 374 Query: 120 RALLNSSVDIQVFATDIDDRAISIARQGLYPESIVTDVAPGKLRQFFIREDGHYRIKKTL 179 +V QVFATDID+RAI+ AR GLYPESI+ DV G++RQF R+ GHYR+KK L Sbjct: 375 TGNTAEAVQYQVFATDIDERAIAHARAGLYPESILADVDAGRVRQFMTRDAGHYRVKKEL 434 Query: 180 REKVLFAAHNILRDPPFSRVHLISCRNLLIYLNREVQEKVFEMFHFALVPGGYLYLGSSE 239 RE VLFA HN+LRDPPFSR+ ++ CRNL IYL+RE Q V FHFAL PGG L+LG SE Sbjct: 435 REHVLFALHNVLRDPPFSRLDMVCCRNLPIYLDREAQLDVLRTFHFALRPGGILFLGGSE 494 Query: 240 SAEVASKYFTPVDKKNRIYRAVVMTHGAHYVPPLPYRRHGAPEIRNYIEVESRPAV---- 295 +A+ F+ VDKK RIYRA V P P H I + + + P + Sbjct: 495 AADSVGNLFSVVDKKARIYRANV---AVRVEAPTP---HAPTAIASSLPMTITPQLGRRK 548 Query: 296 -RYAELHQRLIEQYAPPSVLINRTGEVVHVSKTAGIYLRYPTGEPSHDLVALIIPELRLE 354 + +LHQR+IEQ+APPSVL++R ++VH+S AG +L+Y GEPSH+++A + PELRLE Sbjct: 549 FSFGDLHQRVIEQHAPPSVLVSRDSDIVHLSDRAGRFLQYVGGEPSHNIIATVRPELRLE 608 Query: 355 LRTALFQVQQNNTNAETRQVSVERDGKRSNIALTLRIIPDEGLQNQFILILFNESATDEP 414 LRTA+FQ Q N + E R+V +ERDG+R + + R + D F+LILF DE Sbjct: 609 LRTAIFQALQTNHSVEARRVQLERDGRRFFVNMIARPVHDVEANADFVLILF-----DEV 663 Query: 415 IDHHEESGTSFI-------AKQLENELFITKGQLQTTIEQYETSAEELKASNEELQAINE 467 D E+ + + QLE EL TK QLQ TIEQ ETS EELKASNEELQAINE Sbjct: 664 EDSMAEADAAAVRPQRDPMVSQLEGELQRTKEQLQATIEQSETSTEELKASNEELQAINE 723 Query: 468 ELRSTTEELETSKEELQSINEELITVNHELKMKVDETGKSNDDLQNFISATEIATIFVDR 527 ELRS TEELETSKEELQSINEEL TVN ELK KV+ETGK NDDLQN I+A +I TIFVDR Sbjct: 724 ELRSATEELETSKEELQSINEELTTVNAELKSKVEETGKINDDLQNLITANDIGTIFVDR 783 Query: 528 SMRIKRYTPRSADIFKLIPTDVGRPLLDISHRLEYELLEEDAARVFETLRPCEREVKSDT 587 ++RIKRYTPR+ D+F +IP+D+GR LLDI+HRLEY+ L +DAA F++LR EREV+S Sbjct: 784 NIRIKRYTPRATDVFSIIPSDIGRSLLDITHRLEYDKLSDDAAEAFDSLRLIEREVRSSD 843 Query: 588 GHRYIARLIPYRTNEDQISGLVLTFIDITSLHLAQSKLAAEELRMRVVAASTRDYAIITM 647 G Y+ARL+PYRT ED+I G VL+FIDITS A+ +L ELRMR+VA STRDYAIIT Sbjct: 844 GRWYLARLLPYRTTEDRIDGAVLSFIDITSRRAAEERLRDGELRMRIVAESTRDYAIITF 903 Query: 648 DPTGKITFWNNGAERIFGYSEEEILGQHLDRIFTPEDRDNLVPAQELTTAKKEGHASDER 707 D G++T WN GA RIFGY E E+LG+ D +FTPEDR+ VPA+E+ A+K G ++R Sbjct: 904 DDDGRVTSWNVGAHRIFGYDESEMLGRTADVLFTPEDREQRVPAEEMAQARKYGRVEEDR 963 Query: 708 WHLRKDGTKVFCSGILTRLDDEEMTGYAKIARDLTSSKELETKREARLALETATRLKAEE 767 WHLRKDGT+ SG+L+RLD ++GYAKIARDL R T + ++ Sbjct: 964 WHLRKDGTRFRSSGVLSRLDTAGISGYAKIARDLDEVLPQGAPR------NDPTWRQDDD 1017 Query: 768 AVRLREEFLAVLSHELKHPLNLIQLNAELLKRIPLTQDQGKITRIADVIRSTVQTQAKII 827 +R R+EFLAV+SHELKHPLNLI ++EL+ R + I R IR TVQ QA+II Sbjct: 1018 HMR-RDEFLAVVSHELKHPLNLISASSELIARSAEARRNPVIARATATIRRTVQNQAQII 1076 Query: 828 DDLLDLSRAQTGKLTLRKTLVDIVGITEKITRVFETDTQNKGIELRYQSAVPSLLVFGDT 887 DDLLD+SR +TGKL+L + +D + +++ + D +K + L + + + D Sbjct: 1077 DDLLDMSRMRTGKLSLTRDPIDWREVVQRVCDAVKEDAASKNLTLHCNLSGTPVWINADV 1136 Query: 888 TRLEQILWNLLSNAVKFTPSGGKIFVTLGVEGSNALITVSDSGKGISSHFLPHIFRMFEQ 947 TR+EQ++WNL+SNA+KFT G +I VTL EG A + V DSG GI + LPHIF MF Q Sbjct: 1137 TRIEQVVWNLISNALKFTREGDEIRVTLENEGDRARLVVKDSGHGIDAQVLPHIFDMFRQ 1196 Query: 948 ADAVTTREHGGLGIGLALVRQLAESHGGRVEVESGGLEKGAKFSVWLPLYDG---DHADA 1004 R+ GLGIGL+LV+++ HGG V S GL GA F+V LP D + Sbjct: 1197 GANARGRQ-SGLGIGLSLVKEIVTLHGGTVSASSPGLGHGATFTVELPSGSDSRIDDTEP 1255 Query: 1005 PLQPIDEDLDLLHGKTLLLIDDHIENLETLRDLLSSHGAIVTAKSSGVEALAETARRQFD 1064 P+ P LL G ++L+DD +ET R LL S GA V + ALAE A D Sbjct: 1256 PVTP-----SLLRGLRVMLVDDDAPTVETFRMLLESEGAAVQVATDAEVALAEMAASPPD 1310 Query: 1065 LVVSDIAMPKMDGYQFIALLRKQPQGSAVPVIALTGFGRAIDVQTAMESGFTAHLQKPID 1124 L++SD+ MP MDG++ + RK P + +AL+G+G+ D+ A E+GF AH+ KPI Sbjct: 1311 LLLSDLGMPGMDGFELLRAARKLPGLEGLRAVALSGYGQQRDIDAAQEAGFDAHVSKPIV 1370 Query: 1125 LKNF 1128 L Sbjct: 1371 LDTL 1374