BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0341.p (493 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQD1.1 D8IQD1_HERSS Cytoplasmic axial filament ribonuclease G ... 918 0.0 F1W281.1 F1W281_9BURK Ribonuclease E 882 0.0 A6SVD0.1 A6SVD0_JANMA Ribonuclease G (RNAse G) (Cytoplasmic axia... 861 0.0 A4G2M0.1 A4G2M0_HERAR RNase G (Ribonuclease G) EC=3.1.4.- 861 0.0 B2JE41.1 B2JE41_BURP8 Ribonuclease, Rne/Rng family 774 0.0 >D8IQD1.1 D8IQD1_HERSS Cytoplasmic axial filament ribonuclease G protein EC=3.1.4.- Length = 487 Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/493 (90%), Positives = 464/493 (94%), Gaps = 6/493 (1%) Query: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNVYLGKVVRVLPGMQSAFIDI 60 M+EDILINITPQETRVALILQGAVQELHIERTLSRGLAGN+YLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAKPHDGQHGQHGQNVPQIPIEKLLFDGQTITVQVIKDPIGTKGAR 120 GLERAAFLHVADIWEA+ HDGQ N P IPIEKLL DGQ+ITVQVIKDPIGTKGAR Sbjct: 61 GLERAAFLHVADIWEARSHDGQ------NTPAIPIEKLLHDGQSITVQVIKDPIGTKGAR 114 Query: 121 LSTQISIAGRMLVYLPQDKHIGISQRIENEAEREQLRSKVQGLLPPEEKGGFIIRTMAED 180 LSTQISIAGRMLVYLPQDKHIGISQRIENEAERE LRSKVQ LLPPEEKGGFIIRTMAED Sbjct: 115 LSTQISIAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAED 174 Query: 181 ASDADLQMDVEYLRKTWASIIAQTKTKPAPTLMYQDLSLAQRVLRDFVSDDTSNIQVDSR 240 ASDADLQMDVEYLRKTWA+I+ Q KT PAPTL++QDLSLAQRVLRDFV D T+ IQVDSR Sbjct: 175 ASDADLQMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSR 234 Query: 241 ENFQMLQEFGTLYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQ 300 ENF MLQEFG +YTPSVL KL HYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQ Sbjct: 235 ENFHMLQEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQ 294 Query: 301 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENLEH 360 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDME+ EH Sbjct: 295 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEH 354 Query: 361 RTAVLSELNKALHRDRTKISVSGFSALGLVEMTRKRTRESLAHILCETCPACKGKGQVKT 420 R AVL+EL KAL RDRTKISVSGFS LGLVEMTRKRTRESLAHILCETCPACKG+GQVKT Sbjct: 355 RQAVLAELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKT 414 Query: 421 SRTVCYEILREVLREAKQFNPREFRILAAQVVVDMFLEEESQHLAMLGDFIKKPISLQVQ 480 RTVCYEILREV+REAKQFNPREFRILA+QVVVDMFLEEESQHLAMLGDFI KPISLQVQ Sbjct: 415 PRTVCYEILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQ 474 Query: 481 TDYQQEQYDIILM 493 +DYQQEQYDIILM Sbjct: 475 SDYQQEQYDIILM 487 >F1W281.1 F1W281_9BURK Ribonuclease E Length = 487 Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/493 (86%), Positives = 455/493 (92%), Gaps = 6/493 (1%) Query: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNVYLGKVVRVLPGMQSAFIDI 60 MNEDILINITPQETRVALILQGAVQELHIERTLSRG+AGN+YLGKV RVLPGMQSAFIDI Sbjct: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGMAGNIYLGKVARVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAKPHDGQHGQHGQNVPQIPIEKLLFDGQTITVQVIKDPIGTKGAR 120 GLERAAFLHVADIWEA+ HDG P +PIEKLLFDG ITVQVIKDPIGTKGAR Sbjct: 61 GLERAAFLHVADIWEARSHDGP------ATPALPIEKLLFDGMAITVQVIKDPIGTKGAR 114 Query: 121 LSTQISIAGRMLVYLPQDKHIGISQRIENEAEREQLRSKVQGLLPPEEKGGFIIRTMAED 180 LSTQISIAGRMLVYLPQD HIGISQRIE E+ERE LR KVQ LLPPEEKGGFIIRTMAED Sbjct: 115 LSTQISIAGRMLVYLPQDSHIGISQRIEKESEREALRGKVQKLLPPEEKGGFIIRTMAED 174 Query: 181 ASDADLQMDVEYLRKTWASIIAQTKTKPAPTLMYQDLSLAQRVLRDFVSDDTSNIQVDSR 240 AS+ADLQMD++YLRKTW++I A K+KP +L++QDLSLAQRVLRDFV DDTS IQVDSR Sbjct: 175 ASEADLQMDIDYLRKTWSTIAASAKSKPPTSLLHQDLSLAQRVLRDFVGDDTSTIQVDSR 234 Query: 241 ENFQMLQEFGTLYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQ 300 ENF MLQ+FGT YTPSVL +L HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQ Sbjct: 235 ENFLMLQQFGTSYTPSVLTRLSHYTGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQ 294 Query: 301 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENLEH 360 TEAMTTIDVNTGS+VNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMEN EH Sbjct: 295 TEAMTTIDVNTGSYVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENAEH 354 Query: 361 RTAVLSELNKALHRDRTKISVSGFSALGLVEMTRKRTRESLAHILCETCPACKGKGQVKT 420 R +VLSEL+KAL RDRTK+SVSGFSALGLVEMTRKRTRESLA ILCETCPAC G+GQVKT Sbjct: 355 RASVLSELHKALARDRTKMSVSGFSALGLVEMTRKRTRESLARILCETCPACSGRGQVKT 414 Query: 421 SRTVCYEILREVLREAKQFNPREFRILAAQVVVDMFLEEESQHLAMLGDFIKKPISLQVQ 480 +RT+CYEILRE+LREAKQFNPREFRILA+Q+VVDMFLEEESQHLAMLGDFI KPISLQV+ Sbjct: 415 ARTICYEILRELLREAKQFNPREFRILASQIVVDMFLEEESQHLAMLGDFIGKPISLQVE 474 Query: 481 TDYQQEQYDIILM 493 T YQQEQYDIILM Sbjct: 475 TVYQQEQYDIILM 487 >A6SVD0.1 A6SVD0_JANMA Ribonuclease G (RNAse G) (Cytoplasmic axial filament protein) EC=3.1.4.- Length = 487 Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/493 (83%), Positives = 453/493 (91%), Gaps = 6/493 (1%) Query: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNVYLGKVVRVLPGMQSAFIDI 60 M+EDIL+N+TPQETRVAL+LQGAVQELH+ERTLSRG+AGN+YLGKVVRVLPGMQSAF+DI Sbjct: 1 MSEDILVNVTPQETRVALVLQGAVQELHVERTLSRGMAGNIYLGKVVRVLPGMQSAFVDI 60 Query: 61 GLERAAFLHVADIWEAKPHDGQHGQHGQNVPQIPIEKLLFDGQTITVQVIKDPIGTKGAR 120 GLERAAFLHVADIW+A+ H+G PIE++L+DGQ +TVQVIKDPIGTKGAR Sbjct: 61 GLERAAFLHVADIWDARSHEGPPSS------PTPIERVLYDGQAVTVQVIKDPIGTKGAR 114 Query: 121 LSTQISIAGRMLVYLPQDKHIGISQRIENEAEREQLRSKVQGLLPPEEKGGFIIRTMAED 180 LSTQISIAGRMLVYLPQ+ HIGISQRIENE ERE LR KVQ L+ PEEKGGFIIRTMAED Sbjct: 115 LSTQISIAGRMLVYLPQESHIGISQRIENEVEREILREKVQKLILPEEKGGFIIRTMAED 174 Query: 181 ASDADLQMDVEYLRKTWASIIAQTKTKPAPTLMYQDLSLAQRVLRDFVSDDTSNIQVDSR 240 ASD DLQ DVEYLRKTWA+I Q KTKPAPTL+YQDL LAQRV+RDFV+D+T++IQVDSR Sbjct: 175 ASDGDLQADVEYLRKTWANITQQAKTKPAPTLLYQDLDLAQRVMRDFVNDETASIQVDSR 234 Query: 241 ENFQMLQEFGTLYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQ 300 EN+Q L +FG LYTPSVL KL HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQ Sbjct: 235 ENYQKLLQFGELYTPSVLSKLAHYPGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQ 294 Query: 301 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENLEH 360 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEA+HAIARQLRLRNLGGI+ILDFIDMEN EH Sbjct: 295 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEASHAIARQLRLRNLGGIMILDFIDMENPEH 354 Query: 361 RTAVLSELNKALHRDRTKISVSGFSALGLVEMTRKRTRESLAHILCETCPACKGKGQVKT 420 ++AVL+ELN+AL RDRTK+SVSGFSALGLVEMTRKRTRESLAHILCE CPAC GKGQVKT Sbjct: 355 KSAVLNELNRALSRDRTKVSVSGFSALGLVEMTRKRTRESLAHILCEPCPACSGKGQVKT 414 Query: 421 SRTVCYEILREVLREAKQFNPREFRILAAQVVVDMFLEEESQHLAMLGDFIKKPISLQVQ 480 +RT+CYEILRE+ REAKQFNPREFRILA+QVV+DMFLEEESQHLAMLGDF+ KPISLQV+ Sbjct: 415 ARTICYEILRELTREAKQFNPREFRILASQVVIDMFLEEESQHLAMLGDFLGKPISLQVE 474 Query: 481 TDYQQEQYDIILM 493 T Y QEQYD+ILM Sbjct: 475 TVYHQEQYDVILM 487 >A4G2M0.1 A4G2M0_HERAR RNase G (Ribonuclease G) EC=3.1.4.- Length = 487 Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/493 (84%), Positives = 454/493 (92%), Gaps = 6/493 (1%) Query: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNVYLGKVVRVLPGMQSAFIDI 60 M+EDIL+N+TPQETRVAL+LQGAVQELHIERTLSRG+AGN+YLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILVNVTPQETRVALVLQGAVQELHIERTLSRGMAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAKPHDGQHGQHGQNVPQIPIEKLLFDGQTITVQVIKDPIGTKGAR 120 GLERAAFLHVADIW+A+ HDG P IPIE++LFDGQ+ITVQVIKDPIGTKGAR Sbjct: 61 GLERAAFLHVADIWDARSHDGL-----PTTP-IPIERILFDGQSITVQVIKDPIGTKGAR 114 Query: 121 LSTQISIAGRMLVYLPQDKHIGISQRIENEAEREQLRSKVQGLLPPEEKGGFIIRTMAED 180 LSTQISIAGRMLVYLPQ+ HIGISQRIENE ERE LR KVQ L+ EKGGFIIRTMAED Sbjct: 115 LSTQISIAGRMLVYLPQESHIGISQRIENEVERELLREKVQKLMQEGEKGGFIIRTMAED 174 Query: 181 ASDADLQMDVEYLRKTWASIIAQTKTKPAPTLMYQDLSLAQRVLRDFVSDDTSNIQVDSR 240 ASD DLQMDV+YLRKTW++I KTKPAP+L+YQDL LAQRV+RDFV+D+T++IQVDSR Sbjct: 175 ASDHDLQMDVDYLRKTWSNITQLAKTKPAPSLLYQDLDLAQRVMRDFVNDETASIQVDSR 234 Query: 241 ENFQMLQEFGTLYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQ 300 ENFQ LQ+FG LYTPSVL KL HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQ Sbjct: 235 ENFQKLQQFGELYTPSVLTKLAHYPGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQ 294 Query: 301 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENLEH 360 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEA+HAIARQLRLRNLGG++ILDFIDMEN+EH Sbjct: 295 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEASHAIARQLRLRNLGGMVILDFIDMENVEH 354 Query: 361 RTAVLSELNKALHRDRTKISVSGFSALGLVEMTRKRTRESLAHILCETCPACKGKGQVKT 420 R AVLSELN+AL RDRTK+SVSGFSALGLVEMTRKRTRESLAHILCE CPAC GKGQVKT Sbjct: 355 RNAVLSELNRALARDRTKVSVSGFSALGLVEMTRKRTRESLAHILCEPCPACGGKGQVKT 414 Query: 421 SRTVCYEILREVLREAKQFNPREFRILAAQVVVDMFLEEESQHLAMLGDFIKKPISLQVQ 480 +RT+CYEILRE+ REAKQFNPREFRILA+QVV+DMFLEEESQHLAMLGDF+ KPISLQV+ Sbjct: 415 ARTICYEILRELTREAKQFNPREFRILASQVVIDMFLEEESQHLAMLGDFLGKPISLQVE 474 Query: 481 TDYQQEQYDIILM 493 Y QEQYD+ILM Sbjct: 475 AVYHQEQYDVILM 487 >B2JE41.1 B2JE41_BURP8 Ribonuclease, Rne/Rng family Length = 489 Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/493 (73%), Positives = 429/493 (87%), Gaps = 4/493 (0%) Query: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNVYLGKVVRVLPGMQSAFIDI 60 MNE+ILIN+TPQETRVAL+ QGAVQELH+ERTLSRG GNVYLGKVVRVLPGMQSAFIDI Sbjct: 1 MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAKPHDGQHGQHGQNVPQIPIEKLLFDGQTITVQVIKDPIGTKGAR 120 GLERAAFLHVADIW H G+ Q VP PIEK++F+GQT+ VQV+KDPIGTKGAR Sbjct: 61 GLERAAFLHVADIW----HPRLAGEPQQQVPHQPIEKIVFEGQTLMVQVVKDPIGTKGAR 116 Query: 121 LSTQISIAGRMLVYLPQDKHIGISQRIENEAEREQLRSKVQGLLPPEEKGGFIIRTMAED 180 LSTQ+SIAGR LVYLPQ+ HIGISQ+IE+EAERE +R+++ +LP +EKGG+I+RT+AED Sbjct: 117 LSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTSVLPVDEKGGYIVRTIAED 176 Query: 181 ASDADLQMDVEYLRKTWASIIAQTKTKPAPTLMYQDLSLAQRVLRDFVSDDTSNIQVDSR 240 A+ +L DV YLRKTWA+I++Q + P +L+YQDL+LAQRVLRDFV+D+T+ IQVDSR Sbjct: 177 ATSEELAADVAYLRKTWATILSQAQRMPPTSLLYQDLNLAQRVLRDFVNDETTRIQVDSR 236 Query: 241 ENFQMLQEFGTLYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQ 300 E FQML EF +TP+V KL HY GERPLFDLY +E EI+RAL RRVDLKSGGYL++DQ Sbjct: 237 ETFQMLTEFAAEFTPAVSSKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLVIDQ 296 Query: 301 TEAMTTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENLEH 360 TEAMTTIDVNTG +V RNFDDTIFKTNLEAAH IARQLRLRNLGG+II+DFIDMEN EH Sbjct: 297 TEAMTTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENSEH 356 Query: 361 RTAVLSELNKALHRDRTKISVSGFSALGLVEMTRKRTRESLAHILCETCPACKGKGQVKT 420 R VL EL KAL RDRT+++V+GFS LGLVEMTRKRTRESLAH+LCE CP C+GKGQVKT Sbjct: 357 RDQVLGELKKALARDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKT 416 Query: 421 SRTVCYEILREVLREAKQFNPREFRILAAQVVVDMFLEEESQHLAMLGDFIKKPISLQVQ 480 +RTVCY++LRE+LRE++QFNPREFR++A+Q V+D+FLEEESQHLAML DFI KP+SLQV+ Sbjct: 417 ARTVCYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVE 476 Query: 481 TDYQQEQYDIILM 493 ++ QEQYDI+LM Sbjct: 477 SNLSQEQYDIVLM 489