BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0327.p         (63 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1VV49.1 F1VV49_9BURK Putative uncharacterized protein                 65   3e-09

>F1VV49.1 F1VV49_9BURK Putative uncharacterized protein
          Length = 57

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query: 1  MNHPDEQ-PSGTDGSPKFGRLLVVLILAVLLIVAITFGSEALYS 43
          M HPDEQ P G+DGSPKFGRLL+VL +AV++IV IT GS+A +S
Sbjct: 14 MEHPDEQQPDGSDGSPKFGRLLIVLAIAVMMIVGITLGSQAYFS 57