BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0303.p (275 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B5WCI1.1 B5WCI1_9BURK Error-prone DNA polymerase EC=2.7.7.7 356 2e-96 B2JDI9.1 B2JDI9_BURP8 Error-prone DNA polymerase EC=2.7.7.7 353 2e-95 E1TB52.1 E1TB52_BURSG Error-prone DNA polymerase EC=2.7.7.7 351 7e-95 D5NLK2.1 D5NLK2_9BURK Error-prone DNA polymerase 1 EC=2.7.7.7 347 1e-93 B1FTM8.1 B1FTM8_9BURK Error-prone DNA polymerase 1 EC=2.7.7.7 341 7e-92 >B5WCI1.1 B5WCI1_9BURK Error-prone DNA polymerase EC=2.7.7.7 Length = 1049 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 174/276 (63%), Positives = 217/276 (78%), Gaps = 1/276 (0%) Query: 1 MGFYSPSQLIQDARRHSVRVLPADVMHSNWESTLE-DLRAARPAVRLGLSLLGGMKEEAA 59 MGFYSPSQL+QDA+RH V+VLP DV S W+S+LE + RPAVRLGLSLL GMK+ AA Sbjct: 774 MGFYSPSQLVQDAKRHGVKVLPVDVTVSGWDSSLEPNAGTPRPAVRLGLSLLRGMKDGAA 833 Query: 60 LRIEQARRTQVFSDIQELARRAGLDKRDLQALAAGNALVALSGHRREALWQALDAVPAKD 119 RIE AR + F+ + +LARRA LD++DL ALA NAL +L+G+RREALWQ++ AVP KD Sbjct: 834 ERIENARAVRPFASVNDLARRAQLDRKDLHALAQANALTSLAGNRREALWQSVVAVPDKD 893 Query: 120 LLRAAPLREESLTLQAPSEAEDIVADYRSAGLTLKRHPVALLRPILTRRKFLPHDLMATF 179 +L AA ++E+ L APSEA+DIVADYRS GLTL RHP+ LLRP L + +P + T+ Sbjct: 894 MLAAAAAQDETPELGAPSEADDIVADYRSLGLTLNRHPLELLRPQLLANRLMPASTLRTY 953 Query: 180 QDGQFARGCGIVTVRQRPGTAKGVLFITIEDETGSTNVIIWPTLVEKQRNEVLNASLLGV 239 +DG+ AR CG+VTVRQRPGTAKGV+F+T+EDETG+ NVIIWP L+EKQR E L A+LL V Sbjct: 954 RDGRLARACGLVTVRQRPGTAKGVVFVTLEDETGNVNVIIWPGLLEKQRKEALGAALLAV 1013 Query: 240 YGIWQSHSGVKHLVAKRLVDLSYLLGEINVSSRDFC 275 YG WQ V+HLVA+RLVD+S+LLGE+ +SRDFC Sbjct: 1014 YGTWQCQGEVRHLVAQRLVDMSHLLGELQTTSRDFC 1049 >B2JDI9.1 B2JDI9_BURP8 Error-prone DNA polymerase EC=2.7.7.7 Length = 1049 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 174/275 (63%), Positives = 216/275 (78%), Gaps = 1/275 (0%) Query: 1 MGFYSPSQLIQDARRHSVRVLPADVMHSNWESTLEDLRAA-RPAVRLGLSLLGGMKEEAA 59 MGFYSPSQL+QDARRH VRVLP DV S W+S+LE +R RPAVRLGLSLL GMK+ AA Sbjct: 774 MGFYSPSQLVQDARRHGVRVLPVDVTVSGWDSSLETIRGQQRPAVRLGLSLLRGMKDGAA 833 Query: 60 LRIEQARRTQVFSDIQELARRAGLDKRDLQALAAGNALVALSGHRREALWQALDAVPAKD 119 RIE AR + F + +LARRA L++RDL LA NAL +L+G+RREALW ++ AVP KD Sbjct: 834 ERIENARAVRPFRSVHDLARRAQLNRRDLHVLADANALSSLAGNRREALWHSVAAVPDKD 893 Query: 120 LLRAAPLREESLTLQAPSEAEDIVADYRSAGLTLKRHPVALLRPILTRRKFLPHDLMATF 179 +L A +++++ L APSEA+DIVADYRS GLTL RHP+ LLRP+L ++ LP + + Sbjct: 894 MLSVAAVQDDTPELGAPSEAQDIVADYRSVGLTLGRHPLELLRPVLLEQRLLPASTLRDY 953 Query: 180 QDGQFARGCGIVTVRQRPGTAKGVLFITIEDETGSTNVIIWPTLVEKQRNEVLNASLLGV 239 ++G+ ARGCGIVTVRQRPGTAKGVLF+TIEDETG+ NVIIWP+L+E+QR E L ASLL V Sbjct: 954 RNGRLARGCGIVTVRQRPGTAKGVLFVTIEDETGNVNVIIWPSLLERQRREALGASLLAV 1013 Query: 240 YGIWQSHSGVKHLVAKRLVDLSYLLGEINVSSRDF 274 YG WQ V+HLVA+RLVD+S+LLG + +SRDF Sbjct: 1014 YGTWQCEGEVRHLVAQRLVDMSHLLGGLQSTSRDF 1048 >E1TB52.1 E1TB52_BURSG Error-prone DNA polymerase EC=2.7.7.7 Length = 1049 Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 176/277 (63%), Positives = 215/277 (77%), Gaps = 3/277 (1%) Query: 1 MGFYSPSQLIQDARRHSVRVLPADVMHSNWESTLEDLRAA--RPAVRLGLSLLGGMKEEA 58 MGFYS SQL+QDA+RH V+VLP DV S W S+LE RA RPAVRLGLSLL GMKE Sbjct: 774 MGFYSSSQLVQDAQRHGVKVLPVDVSVSGWNSSLER-RAGGERPAVRLGLSLLRGMKEGT 832 Query: 59 ALRIEQARRTQVFSDIQELARRAGLDKRDLQALAAGNALVALSGHRREALWQALDAVPAK 118 A RIE AR + F+ +++LARRA LD+RDL LA NAL +L+G+RREALWQ+ AVP K Sbjct: 833 AGRIENARAVRPFASVKDLARRAALDRRDLHILADANALASLAGNRREALWQSAAAVPEK 892 Query: 119 DLLRAAPLREESLTLQAPSEAEDIVADYRSAGLTLKRHPVALLRPILTRRKFLPHDLMAT 178 D+L AA + +E+ L APSEA DIVADYRS GLTL RHP+ LLRP L + +P + T Sbjct: 893 DMLAAAAVEDETPELGAPSEAHDIVADYRSLGLTLGRHPLELLRPQLLANRLMPASTLRT 952 Query: 179 FQDGQFARGCGIVTVRQRPGTAKGVLFITIEDETGSTNVIIWPTLVEKQRNEVLNASLLG 238 ++DG+ ARGCG+VTVRQRPGTAKGV+F+TIEDETG+ NVIIWP+L+EKQR E L+ASLL Sbjct: 953 YRDGRLARGCGLVTVRQRPGTAKGVIFVTIEDETGNVNVIIWPSLLEKQRKEALSASLLA 1012 Query: 239 VYGIWQSHSGVKHLVAKRLVDLSYLLGEINVSSRDFC 275 VYG+WQ V+HLVA+RLVD+S+LLG + SR+FC Sbjct: 1013 VYGVWQCQGEVRHLVAQRLVDMSHLLGGLQAVSRNFC 1049 >D5NLK2.1 D5NLK2_9BURK Error-prone DNA polymerase 1 EC=2.7.7.7 Length = 1049 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 168/275 (61%), Positives = 215/275 (78%), Gaps = 1/275 (0%) Query: 1 MGFYSPSQLIQDARRHSVRVLPADVMHSNWESTLEDLRAA-RPAVRLGLSLLGGMKEEAA 59 MGFYSPSQL+QDA+RH V+VLP DV S W+S L +L+ A RPAVRLG+SLL GMK+ AA Sbjct: 774 MGFYSPSQLVQDAQRHGVKVLPVDVTISGWDSALVNLQGAGRPAVRLGMSLLRGMKDGAA 833 Query: 60 LRIEQARRTQVFSDIQELARRAGLDKRDLQALAAGNALVALSGHRREALWQALDAVPAKD 119 RIE AR + F + +LARRA LD++DL LA NAL +L+G+RREALWQ++ AVP +D Sbjct: 834 ERIENARAVRPFESVNDLARRAQLDRKDLHVLADANALTSLAGNRREALWQSVAAVPDRD 893 Query: 120 LLRAAPLREESLTLQAPSEAEDIVADYRSAGLTLKRHPVALLRPILTRRKFLPHDLMATF 179 +L A +++E+ L AP+EA DIVADYRS GLTL RHP+ LLRP L ++ +P + T+ Sbjct: 894 MLATAAVQDETPALGAPTEANDIVADYRSVGLTLGRHPLELLRPQLLAKRLMPASTLRTY 953 Query: 180 QDGQFARGCGIVTVRQRPGTAKGVLFITIEDETGSTNVIIWPTLVEKQRNEVLNASLLGV 239 +DG+ ARGCG+VTVRQRPGTAKGV+F+T+EDETG+ NVI+WP L+EKQR E L ASLL V Sbjct: 954 RDGRLARGCGLVTVRQRPGTAKGVMFVTLEDETGNVNVIVWPGLLEKQRQEALGASLLAV 1013 Query: 240 YGIWQSHSGVKHLVAKRLVDLSYLLGEINVSSRDF 274 YG WQ V+HLVA+RLVD+S+LLG + S+R+F Sbjct: 1014 YGTWQCQGEVRHLVAQRLVDMSHLLGTLVTSTRNF 1048 >B1FTM8.1 B1FTM8_9BURK Error-prone DNA polymerase 1 EC=2.7.7.7 Length = 1049 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 174/276 (63%), Positives = 217/276 (78%), Gaps = 1/276 (0%) Query: 1 MGFYSPSQLIQDARRHSVRVLPADVMHSNWESTLEDLRA-ARPAVRLGLSLLGGMKEEAA 59 MGFYSPSQL+QDA+RH V+VLP DV S W S+LE + RPAVRLGLSLL GMKE A Sbjct: 774 MGFYSPSQLVQDAQRHGVKVLPVDVTISGWNSSLEPMAGEKRPAVRLGLSLLRGMKEGTA 833 Query: 60 LRIEQARRTQVFSDIQELARRAGLDKRDLQALAAGNALVALSGHRREALWQALDAVPAKD 119 RIE +R + F+ +++LARRA LD+RDL LA NAL AL+G+RREALWQ++ AVP KD Sbjct: 834 ERIENSRAVRPFASVKDLARRAALDRRDLHILADANALAALAGNRREALWQSVAAVPEKD 893 Query: 120 LLRAAPLREESLTLQAPSEAEDIVADYRSAGLTLKRHPVALLRPILTRRKFLPHDLMATF 179 +L AA + +E+ L APSEA DI+ADYRS GLTL RHP+ LLRP L + +P + T+ Sbjct: 894 MLAAAAVEDETPELGAPSEANDILADYRSVGLTLGRHPLELLRPQLLANRLMPAATLRTY 953 Query: 180 QDGQFARGCGIVTVRQRPGTAKGVLFITIEDETGSTNVIIWPTLVEKQRNEVLNASLLGV 239 +DG+ ARGCG+VTVRQRPGTAKGV+F+T+EDETG+ NVIIWPTL+EKQR E L+ASLL V Sbjct: 954 RDGRLARGCGLVTVRQRPGTAKGVVFVTLEDETGNVNVIIWPTLLEKQRKEALSASLLAV 1013 Query: 240 YGIWQSHSGVKHLVAKRLVDLSYLLGEINVSSRDFC 275 YG+WQ V+HLVA+RLVD+S+LLG ++ SR+FC Sbjct: 1014 YGVWQCQGEVRHLVAQRLVDMSHLLGGLHSVSRNFC 1049