BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0296.p         (182 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J1A2.1 D8J1A2_HERSS Multidrug resistance transport transmembra...   249   1e-64
D8N6T6.1 D8N6T6_RALSO Putative multidrug resistance transport tr...   224   3e-57
E0LP18.1 E0LP18_SPHCR Secretion protein HlyD family protein           224   5e-57
Q8XVV1.1 Q8XVV1_RALSO Probable multidrug resistance transport tr...   222   1e-56
D8NYL5.1 D8NYL5_RALSO Putative multidrug resistance transport tr...   219   1e-55

>D8J1A2.1 D8J1A2_HERSS Multidrug resistance transport transmembrane protein
          Length = 397

 Score =  249 bits (636), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/166 (77%), Positives = 148/166 (89%)

Query: 12  RLRVHSIEAQVRQARAQGETARAQFDAANVNLGSTQVTASVAGRIGDKQVRVGQFVSAGT 71
           +LRV S++AQVRQA+AQGETA+AQ+DAA+VNLG T++ ASV GRIGDKQVRVGQFVS GT
Sbjct: 209 QLRVRSLQAQVRQAQAQGETAKAQYDAASVNLGYTEIRASVDGRIGDKQVRVGQFVSPGT 268

Query: 72  RLMTVVPSDFYVVANFKETQIGSMRTGQPVAIKVDALPGTKFKGHVESIAPGTGAQFSLL 131
           R+MTVVP+ FYV ANFKETQIG MR GQP  IKVDALPG +F GHVES++PGTGAQFSLL
Sbjct: 269 RMMTVVPTRFYVSANFKETQIGIMRIGQPAIIKVDALPGVEFHGHVESLSPGTGAQFSLL 328

Query: 132 PPQNATGNFTKIVQRVPVRIAVDASAEDRRIFVAGLSVTAEVDTAA 177
           PPQNATGNFTKIVQRVPVR+A+DA+ E+ R FVAGLSVT EV+T A
Sbjct: 329 PPQNATGNFTKIVQRVPVRVAIDATPEETRAFVAGLSVTVEVNTIA 374


>D8N6T6.1 D8N6T6_RALSO Putative multidrug resistance transport transmembrane
           protein
          Length = 390

 Score =  224 bits (572), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 110/173 (63%), Positives = 132/173 (76%)

Query: 8   LEAARLRVHSIEAQVRQARAQGETARAQFDAANVNLGSTQVTASVAGRIGDKQVRVGQFV 67
           L  A L + S++AQ+RQA AQ +TARAQ   A VNL +T++ AS  GR+GD QVR GQFV
Sbjct: 205 LTKATLEIASLQAQLRQAEAQAKTARAQAAVAEVNLAATELRASTDGRVGDSQVRAGQFV 264

Query: 68  SAGTRLMTVVPSDFYVVANFKETQIGSMRTGQPVAIKVDALPGTKFKGHVESIAPGTGAQ 127
           SAGTRLM+VVP+  Y+ ANFKETQ+G MR GQPV I VDA P    +GHVES++PGTGAQ
Sbjct: 265 SAGTRLMSVVPTHLYITANFKETQLGRMRIGQPVHIHVDAFPDEAIEGHVESLSPGTGAQ 324

Query: 128 FSLLPPQNATGNFTKIVQRVPVRIAVDASAEDRRIFVAGLSVTAEVDTAATER 180
           FSLLPPQNATGNF KIVQRVPVRIA+D +   + +  AG+SVT +VDT A  R
Sbjct: 325 FSLLPPQNATGNFIKIVQRVPVRIALDVTDRLKPLLAAGMSVTVDVDTLAPVR 377


>E0LP18.1 E0LP18_SPHCR Secretion protein HlyD family protein
          Length = 383

 Score =  224 bits (571), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 110/163 (67%), Positives = 131/163 (80%), Gaps = 1/163 (0%)

Query: 14  RVHSIEAQVRQARAQGETARAQFDAANVNLGSTQVTASVAGRIGDKQVRVGQFVSAGTRL 73
           RV ++EAQVRQA+AQGE ARAQ  AAN ++ +T + A+V GRIGD+ VR GQF+ A TRL
Sbjct: 198 RVATLEAQVRQAQAQGEAARAQLSAANTDVEATILRAAVDGRIGDRSVRQGQFIQAATRL 257

Query: 74  MTVVPS-DFYVVANFKETQIGSMRTGQPVAIKVDALPGTKFKGHVESIAPGTGAQFSLLP 132
           MT+VPS   YV ANFKETQ+G MR GQPV I+VDALPG + +G V SIAPGTGAQFS+LP
Sbjct: 258 MTLVPSASLYVEANFKETQLGLMRVGQPVTIEVDALPGVELRGRVASIAPGTGAQFSVLP 317

Query: 133 PQNATGNFTKIVQRVPVRIAVDASAEDRRIFVAGLSVTAEVDT 175
           PQNATGNFTKIVQR+PVRIA+DA  E R++ V G+SV   VDT
Sbjct: 318 PQNATGNFTKIVQRIPVRIAIDAGPETRKLLVPGMSVEVSVDT 360


>Q8XVV1.1 Q8XVV1_RALSO Probable multidrug resistance transport transmembrane
           protein
          Length = 388

 Score =  222 bits (566), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 109/173 (63%), Positives = 131/173 (75%)

Query: 8   LEAARLRVHSIEAQVRQARAQGETARAQFDAANVNLGSTQVTASVAGRIGDKQVRVGQFV 67
           L  A L + +++AQ+RQA AQ +TARAQ   A VNL +T++ AS  GR+GD QVR GQFV
Sbjct: 203 LTKATLEIAALQAQLRQAEAQAKTARAQAAVAEVNLAATELRASTDGRVGDSQVRAGQFV 262

Query: 68  SAGTRLMTVVPSDFYVVANFKETQIGSMRTGQPVAIKVDALPGTKFKGHVESIAPGTGAQ 127
           SAGTRLM+VVP   Y+ ANFKETQ+G MR GQPV I VDA P    +GHVES++PGTGAQ
Sbjct: 263 SAGTRLMSVVPMHLYITANFKETQLGRMRIGQPVHIHVDAFPDEAIEGHVESLSPGTGAQ 322

Query: 128 FSLLPPQNATGNFTKIVQRVPVRIAVDASAEDRRIFVAGLSVTAEVDTAATER 180
           FSLLPPQNATGNF KIVQRVPVRIA+D +   + +  AG+SVT +VDT A  R
Sbjct: 323 FSLLPPQNATGNFIKIVQRVPVRIALDVTDRLKPLLAAGMSVTVDVDTLAPVR 375


>D8NYL5.1 D8NYL5_RALSO Putative multidrug resistance transport transmembrane
           protein
          Length = 388

 Score =  219 bits (559), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/170 (63%), Positives = 130/170 (76%)

Query: 8   LEAARLRVHSIEAQVRQARAQGETARAQFDAANVNLGSTQVTASVAGRIGDKQVRVGQFV 67
           L  A L + +I+AQ+RQA AQ +TARAQ   A VNL +T++ AS  GR+GD QVRVGQFV
Sbjct: 203 LTKATLEIAAIQAQLRQAEAQAKTARAQAAVAEVNLAATELRASTDGRVGDSQVRVGQFV 262

Query: 68  SAGTRLMTVVPSDFYVVANFKETQIGSMRTGQPVAIKVDALPGTKFKGHVESIAPGTGAQ 127
           SAGTRLM+VVP+  Y+ ANFKETQ+G MR GQPV I VDA P    +G VES++PGTGAQ
Sbjct: 263 SAGTRLMSVVPAHLYITANFKETQLGRMRIGQPVHIHVDAFPDEAIEGRVESLSPGTGAQ 322

Query: 128 FSLLPPQNATGNFTKIVQRVPVRIAVDASAEDRRIFVAGLSVTAEVDTAA 177
           FSLLPPQNATGNF KIVQRVPVRI +D +   + +  AG+SVT +VDT A
Sbjct: 323 FSLLPPQNATGNFIKIVQRVPVRIEIDVTDGLKPLLAAGMSVTVDVDTLA 372