BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0278.p         (104 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B0RUF5.1 B0RUF5_XANCB Transcriptional regulator, AraC family           84   7e-15
Q8PCB4.1 Q8PCB4_XANCP Transcriptional regulator                        82   3e-14
Q4UR69.1 Q4UR69_XANC8 Transcriptional regulator                        82   3e-14
Q48G43.1 Q48G43_PSE14 Transcriptional regulator                        75   2e-12
E7PLQ3.1 E7PLQ3_PSESG Transcriptional regulator                        75   2e-12

>B0RUF5.1 B0RUF5_XANCB Transcriptional regulator, AraC family
          Length = 247

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 52/76 (68%)

Query: 7  LSFRTYGADGPLHSHDHVQIVLPMQGEMDIEVDGRGNTLDITRAAFVAPDINHAQSAQGP 66
          L  R YG DG  H H HVQ+VLP++G ++IEV GRG  +D  +A  +AP  +H Q+A   
Sbjct: 6  LHLRRYGRDGYRHRHAHVQVVLPVRGTLEIEVGGRGGRVDHRQAVVIAPHTDHDQAAHDD 65

Query: 67 NRFLILDCKLVDIGAN 82
          NRFLIL+C + D+GA+
Sbjct: 66 NRFLILECSVADVGAH 81


>Q8PCB4.1 Q8PCB4_XANCP Transcriptional regulator
          Length = 247

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 51/76 (67%)

Query: 7  LSFRTYGADGPLHSHDHVQIVLPMQGEMDIEVDGRGNTLDITRAAFVAPDINHAQSAQGP 66
          L  R YG DG  H H HVQ+VLP++G ++IEV GRG  +D  +A  +AP  +H Q+A   
Sbjct: 6  LHLRQYGRDGYRHRHAHVQVVLPVRGTLEIEVGGRGGRVDHRQAVVIAPHTDHDQAAHDD 65

Query: 67 NRFLILDCKLVDIGAN 82
          NRFLIL+C   D+GA+
Sbjct: 66 NRFLILECSDADVGAH 81


>Q4UR69.1 Q4UR69_XANC8 Transcriptional regulator
          Length = 247

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 51/76 (67%)

Query: 7  LSFRTYGADGPLHSHDHVQIVLPMQGEMDIEVDGRGNTLDITRAAFVAPDINHAQSAQGP 66
          L  R YG DG  H H HVQ+VLP++G ++IEV GRG  +D  +A  +AP  +H Q+A   
Sbjct: 6  LHLRQYGRDGYRHRHAHVQVVLPVRGTLEIEVGGRGGRVDHRQAVVIAPHTDHDQAAHDD 65

Query: 67 NRFLILDCKLVDIGAN 82
          NRFLIL+C   D+GA+
Sbjct: 66 NRFLILECSDADVGAH 81


>Q48G43.1 Q48G43_PSE14 Transcriptional regulator
          Length = 242

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%)

Query: 7  LSFRTYGADGPLHSHDHVQIVLPMQGEMDIEVDGRGNTLDITRAAFVAPDINHAQSAQGP 66
          L  R+Y    P H HDH Q+VLP++G M+I+VDGRG  +D + AA V P   H+Q     
Sbjct: 5  LEVRSYKTQSPQHCHDHTQLVLPIRGRMEIDVDGRGGFIDQSLAALVKPGSRHSQDTHVD 64

Query: 67 NRFLILDC 74
          +RFL+LDC
Sbjct: 65 SRFLVLDC 72


>E7PLQ3.1 E7PLQ3_PSESG Transcriptional regulator
          Length = 242

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%)

Query: 7  LSFRTYGADGPLHSHDHVQIVLPMQGEMDIEVDGRGNTLDITRAAFVAPDINHAQSAQGP 66
          L  R+Y    P H HDH Q+VLP++G M+I+VDGRG  +D + AA V P   H+Q     
Sbjct: 5  LEVRSYKTQSPQHCHDHTQLVLPIRGRMEIDVDGRGGFIDQSLAALVKPGSRHSQDTHVD 64

Query: 67 NRFLILDC 74
          +RFL+LDC
Sbjct: 65 SRFLVLDC 72