BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0273.p (582 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITT0.1 D8ITT0_HERSS Membrane protein 276 7e-72 B5WDN8.1 B5WDN8_9BURK Putative uncharacterized protein 200 6e-49 D5W4S5.1 D5W4S5_BURSC Putative uncharacterized protein 199 1e-48 C5AJ65.1 C5AJ65_BURGB Putative uncharacterized protein 196 9e-48 Q143A3.1 Q143A3_BURXL Putative uncharacterized protein 192 1e-46 >D8ITT0.1 D8ITT0_HERSS Membrane protein Length = 711 Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 217/424 (51%), Positives = 265/424 (62%), Gaps = 30/424 (7%) Query: 158 ARQAVARVNAMALLLRTIQSGVAATPGKRNLVHSDTEDARAMLRLRQLVGRAPSQVAQLL 217 ARQ RV +A + R +Q+ AA + + +D EDAR M RLRQLV R PS +LL Sbjct: 298 ARQRTTRV--LAGIARQLQAMQAAM-SQGEAIAAD-EDARIMARLRQLVARLPSGTGRLL 353 Query: 218 QLRDLH--------DADGLMVLADWKRAARPPLPQPSLRHGALDALRMAAAHLRSGSAEV 269 Q +H D GL ++A + AA P L H R AA+H +GSAE Sbjct: 354 Q--QVHTPLAVGSDDPAGLKLMA--RSAAPAPALPAILLHRVRAWWRKAASHAATGSAEW 409 Query: 270 RHGLRCAAAAGITYLIVHLLQLPFGYWATMATMLVMQPSVADSWSRSMERAVGSIVGGVL 329 H RCAAAAG TYLIVHLL+LPFGYWATMATMLVMQPS+A+SWSRSMERAVGS+VGGVL Sbjct: 410 HHAWRCAAAAGATYLIVHLLELPFGYWATMATMLVMQPSIAESWSRSMERAVGSVVGGVL 469 Query: 330 AVALCLYIHSPLALALLVFPMAALSMGLRPVSYGLYSLFLTPVFVLVADVAAQPQLQLQL 389 AV LCL +HSPLALALLVFP+ L+M L+PVSYGLY+ FLTPVFVLVADV P +L Sbjct: 470 AVVLCLVVHSPLALALLVFPLTVLTMALKPVSYGLYATFLTPVFVLVADVGGDP--AHEL 527 Query: 390 SNALLRAGNNVIGAVVAIVATYLLWPHRRQANLHRSLSHMIVINLACLRGALASQ--PHA 447 +NA LRAGNNVIGAVVA++A+YL WP R + L M +NLA L ALA+ P Sbjct: 528 ANAALRAGNNVIGAVVAVLASYLFWPRRHPEDPQAQLQRMAQLNLAYLIEALATPAAPPM 587 Query: 448 AQMHARRREACVVNIESGLLLQRLLREGDMNARQIHDARTSVALARRLACAATHIWLEER 507 A +HA RR ACV N+E+GLLLQR+ RE R RT+VAL+RRLA AA+HIW + Sbjct: 588 ATLHAHRRAACVANVEAGLLLQRVARERGWPERDHGRGRTAVALSRRLAAAASHIWAHPQ 647 Query: 508 KSATAAERLAHVEFDNWLQTMEDLFERRVTAAASCAALVQQRPVVHDLARADAVETVCLL 567 ++ + + + L++ RP LA+A AVET CLL Sbjct: 648 AASP----------ELLGWLRALAAALSAHQSRALHDLLRHRPAPMHLAQAAAVETACLL 697 Query: 568 AAAM 571 A + Sbjct: 698 VATL 701 Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 126/164 (76%), Positives = 139/164 (84%) Query: 1 MRHASLSEGLRAALAAGTMLLVGECLHNPLFSWAAIGAFLTCLADSAGSNRSRLASMGGF 60 +RHA+LSEGLRAA +A MLL+GE L NPLFSWAAIGAFLTCLADSAGSNR+RLASMGGF Sbjct: 40 LRHANLSEGLRAACSAAAMLLLGEWLGNPLFSWAAIGAFLTCLADSAGSNRARLASMGGF 99 Query: 61 ALASTMGGMFAATLSGMGMPAGLLAIMVCAGIAGFSRIYGAATGLVLMLAAGVSAILADF 120 ALAST+GGM AA+ + + + G L IM CAG+AGFSRIYGAA GLVLMLAAGVSAI+AD Sbjct: 100 ALASTLGGMVAASAASLSVELGWLTIMACAGVAGFSRIYGAAAGLVLMLAAGVSAIMADA 159 Query: 121 PVTLLPLQHSHVAIYFSGCAWATLLGLSVWRIHPFAPARQAVAR 164 PV L PL SHV IYF GC WA LLGL+VWRIHPF PARQAVAR Sbjct: 160 PVILWPLSQSHVLIYFGGCLWALLLGLTVWRIHPFGPARQAVAR 203 >B5WDN8.1 B5WDN8_9BURK Putative uncharacterized protein Length = 698 Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 122/261 (46%), Positives = 163/261 (62%), Gaps = 17/261 (6%) Query: 272 GLRCAAAAGIT----YLIVHLLQLPFGYWATMATMLVMQPSVADSWSRSMERAVGSIVGG 327 GLR AA G+T ++++ L LPFGYWATMAT+L++QPS+A +W RS+ERA GSIVGG Sbjct: 393 GLRHAARVGVTTTAGFMVIRALGLPFGYWATMATLLILQPSIAATWPRSIERAAGSIVGG 452 Query: 328 VLAVALCLYIHSPLALALLVFPMAALSMGLRPVSYGLYSLFLTPVFVLVADVAAQPQLQL 387 VLA A+ IHSPLA++L+VFP+ +M LRPVSY L+ LFLTP FVLVAD A P Sbjct: 453 VLAAAIGYAIHSPLAISLVVFPLVMATMALRPVSYSLFVLFLTPTFVLVADF-ATPGAN- 510 Query: 388 QLSNALLRAGNNVIGAVVAIVATYLLWPHRRQANLHRSLSHMIVINLACLRGALASQPHA 447 +L+ AL R GNNV+G V+A++AT+LLWP R + +L L + NLA LR +L + H Sbjct: 511 ELAFALTRLGNNVLGCVLALLATFLLWPTREKLDLRVYLGDAVRANLAYLRASLEAPRHG 570 Query: 448 -AQMHARRREACVV--NIESGLLLQRLLREGDMNARQIHDARTSVALARRLACAATHIWL 504 ++ RR A + N E + RL + D A + T ++L RR+A AT + L Sbjct: 571 VKEIEQLRRAAGLTSNNAEEAIGRVRLEKLEDSMADTV--TLTVLSLLRRMAGTATQLRL 628 Query: 505 EERKSATAAERLAHVEFDNWL 525 TA R H E D W+ Sbjct: 629 ------TANRRDMHNELDEWV 643 Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 77/157 (49%), Positives = 102/157 (64%) Query: 3 HASLSEGLRAALAAGTMLLVGECLHNPLFSWAAIGAFLTCLADSAGSNRSRLASMGGFAL 62 ASLSEGLRAA A+ ML +G LH+P F+WAAIGAF TCLAD+ GSNR+R SM GFAL Sbjct: 40 EASLSEGLRAACASTAMLALGNLLHDPEFAWAAIGAFWTCLADAGGSNRARFMSMMGFAL 99 Query: 63 ASTMGGMFAATLSGMGMPAGLLAIMVCAGIAGFSRIYGAATGLVLMLAAGVSAILADFPV 122 ST+ G A SG G LA++ + F RI+GA+T V +LAA ++ D P+ Sbjct: 100 LSTLCGGVTAFASGAGTTFAALAVLAFTTLGAFGRIWGASTSQVTILAATACVVMVDRPM 159 Query: 123 TLLPLQHSHVAIYFSGCAWATLLGLSVWRIHPFAPAR 159 + + + +Y +GC +A +L L+VWRIHPFA +R Sbjct: 160 HDARAEFAFLGVYLAGCLFAIVLSLTVWRIHPFAASR 196 >D5W4S5.1 D5W4S5_BURSC Putative uncharacterized protein Length = 697 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 136/317 (42%), Positives = 183/317 (57%), Gaps = 28/317 (8%) Query: 272 GLRCAAAAGIT----YLIVHLLQLPFGYWATMATMLVMQPSVADSWSRSMERAVGSIVGG 327 GLR AA G+T ++++ L LPFGYWATMAT+L++QPS+A +W RS+ERA GSIVGG Sbjct: 392 GLRHAARVGVTTTAGFVVIRALGLPFGYWATMATLLILQPSIAATWPRSIERAAGSIVGG 451 Query: 328 VLAVALCLYIHSPLALALLVFPMAALSMGLRPVSYGLYSLFLTPVFVLVADVAAQPQLQL 387 VLA A+ IHSPL ++L VFP+ +M LRPVSY L+ LFLTP FVLVAD A P Sbjct: 452 VLAAAIGYAIHSPLGISLAVFPLVIATMALRPVSYSLFVLFLTPTFVLVADF-ATPGAN- 509 Query: 388 QLSNALLRAGNNVIGAVVAIVATYLLWPHRRQANLHRSLSHMIVINLACLRGALASQPHA 447 +L+ AL R GNNV+G V+A++AT+LLWP R + +L L + NLA LR +L + H Sbjct: 510 ELAFALTRLGNNVLGCVLALLATFLLWPTREKLDLRVYLGDAVRANLAYLRASLEAPRHG 569 Query: 448 A-QMHARRREACVV--NIESGLLLQRLLREGDMNARQIHDARTSVALARRLACAATHIWL 504 ++ RR A + N E + RL + D A + T ++L RR+A AT + L Sbjct: 570 GKEIEQLRRAAGLTSNNAEEAIGRVRLEKLEDSMADTV--TLTVLSLLRRMAGTATQLRL 627 Query: 505 EERKSATAAERLAHVEFDNWLQTMEDLFERRVTAAASCAALVQQRPVVHDLARADAVETV 564 +A R H E D W+ M +AA A RPV +L A E + Sbjct: 628 ------SANRRDMHSELDQWVVAM--------SAAIEAALNRTLRPVRLEL---PAREQL 670 Query: 565 CLLAAAMYPELSSVKKL 581 L A + EL+ V +L Sbjct: 671 TSLEADVVGELARVHRL 687 Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 77/157 (49%), Positives = 100/157 (63%) Query: 3 HASLSEGLRAALAAGTMLLVGECLHNPLFSWAAIGAFLTCLADSAGSNRSRLASMGGFAL 62 A+LSEGLRAA A+ ML +G LH+P+F+WAAIGAF TCLAD+AGSNR+R SM GFAL Sbjct: 39 EANLSEGLRAACASTAMLALGNVLHDPVFAWAAIGAFWTCLADAAGSNRARFMSMMGFAL 98 Query: 63 ASTMGGMFAATLSGMGMPAGLLAIMVCAGIAGFSRIYGAATGLVLMLAAGVSAILADFPV 122 ST+ G AA S G LA++ + F RI+GAAT V +LAA ++ D P+ Sbjct: 99 LSTLCGGIAAFASASGTAWAALAVLAFTTLGAFGRIWGAATSQVTILAATACVVMVDRPM 158 Query: 123 TLLPLQHSHVAIYFSGCAWATLLGLSVWRIHPFAPAR 159 + +Y GC +A +L L+VWRIHPF +R Sbjct: 159 HDARAGVEFLGVYLVGCLFAIVLSLTVWRIHPFGASR 195 >C5AJ65.1 C5AJ65_BURGB Putative uncharacterized protein Length = 716 Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 112/244 (45%), Positives = 156/244 (63%), Gaps = 3/244 (1%) Query: 260 AHLRSGSAEVRHGLRCAAAAGITYLIVHLLQLPFGYWATMATMLVMQPSVADSWSRSMER 319 A+L S +RH R A A + +L+V LL +PFGYW TMAT+L++QPS+A +W RS+ER Sbjct: 390 ANLSWKSIGLRHAARVAVATTLGFLVVRLLGVPFGYWTTMATLLILQPSIAGTWPRSVER 449 Query: 320 AVGSIVGGVLAVALCLYIHSPLALALLVFPMAALSMGLRPVSYGLYSLFLTPVFVLVADV 379 A GSIVGG+LA A+ L +HSP+ ++L+VFP+ +M LRPVSY L+ LFLTP FVLVAD Sbjct: 450 AAGSIVGGLLAAAIGLAVHSPIGISLVVFPLVCATMALRPVSYSLFVLFLTPTFVLVADF 509 Query: 380 AAQPQLQLQLSNALLRAGNNVIGAVVAIVATYLLWPHRRQANLHRSLSHMIVINLACLRG 439 A P +LS AL R GNNV+G V+A+VAT++LWP R Q ++ L+ I NL L Sbjct: 510 -AMPAAS-ELSYALTRLGNNVLGCVIALVATFMLWPTREQIDIRGQLAAAIAANLRYLVD 567 Query: 440 ALASQPHAAQMHAR-RREACVVNIESGLLLQRLLREGDMNARQIHDARTSVALARRLACA 498 A+ + A++ R RREA + + + R+ E + R A T + L RR+A Sbjct: 568 AIEAPGRASREAERLRREAGLASNNAEEAFNRIRLERLDDTRFDTAASTVLGLLRRMAGT 627 Query: 499 ATHI 502 A ++ Sbjct: 628 AAYL 631 Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 82/162 (50%), Positives = 105/162 (64%) Query: 1 MRHASLSEGLRAALAAGTMLLVGECLHNPLFSWAAIGAFLTCLADSAGSNRSRLASMGGF 60 + ASLSEGLRAA A+ ML+ G LH P F+WAAIGAF TCLAD+AGSNR+R ASM F Sbjct: 40 INDASLSEGLRAACASTAMLVAGNLLHEPGFAWAAIGAFWTCLADAAGSNRTRFASMASF 99 Query: 61 ALASTMGGMFAATLSGMGMPAGLLAIMVCAGIAGFSRIYGAATGLVLMLAAGVSAILADF 120 A+ S + G A SG+G A LLA++V + RI+GAAT V +LAA ++AD Sbjct: 100 AVLSALCGGITAFASGIGTAAALLAVLVFTSLGALGRIWGAATAQVAILAATACVVMADR 159 Query: 121 PVTLLPLQHSHVAIYFSGCAWATLLGLSVWRIHPFAPARQAV 162 P+ + + +Y GC A +L L+VWRIHPFA +R AV Sbjct: 160 PMHDWHNGLAFLGVYLLGCVLAIVLSLTVWRIHPFAQSRAAV 201 >Q143A3.1 Q143A3_BURXL Putative uncharacterized protein Length = 700 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 123/308 (39%), Positives = 169/308 (54%), Gaps = 21/308 (6%) Query: 260 AHLRSGSAEVRHGLRCAAAAGITYLIVHLLQLPFGYWATMATMLVMQPSVADSWSRSMER 319 A+L + S +RH R +L++ L LPFGYWATMAT+L++QPS+A +W RS+ER Sbjct: 387 ANLSADSVGLRHAARVGVTTTAGFLVIRALGLPFGYWATMATLLILQPSIAATWPRSIER 446 Query: 320 AVGSIVGGVLAVALCLYIHSPLALALLVFPMAALSMGLRPVSYGLYSLFLTPVFVLVADV 379 A GSIVGGVLA A+ IHSPL ++L VFP+ +M LRPVSY L+ LFLTP FVLVAD Sbjct: 447 AAGSIVGGVLAAAIGYAIHSPLGISLAVFPLVMATMALRPVSYSLFVLFLTPTFVLVADF 506 Query: 380 AAQPQLQLQLSNALLRAGNNVIGAVVAIVATYLLWPHRRQANLHRSLSHMIVINLACLRG 439 A P + + A+ R GNNV+G V+A++AT+ LWP R + + L + NLA LR Sbjct: 507 -ATPGAS-EFAYAITRLGNNVLGCVLALLATFYLWPTREKIDYRAYLGEAVRANLAYLRA 564 Query: 440 ALASQPHAAQMHARRREACVV---NIESGLLLQRLLREGDMNARQIHDARTSVALARRLA 496 AL S + + R R A + N E + RL + D + T +++ RR+A Sbjct: 565 ALESPRRSEKEMERLRRAAGLGSNNAEEAIGRMRLEKLEDSMVDTV--TLTVLSVLRRMA 622 Query: 497 CAATHIWLEERKSATAAERLAHVEFDNWLQTMEDLFERRVTAAASCAALVQQRPVVHDLA 556 AT + L + R H E W+ T V+A A RPV H L Sbjct: 623 GTATQLRLSTNR------RDMHDELGAWIAT--------VSADIDAALNRTLRPVRHALP 668 Query: 557 RADAVETV 564 D + ++ Sbjct: 669 ARDGLTSL 676 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 124/220 (56%), Gaps = 15/220 (6%) Query: 3 HASLSEGLRAALAAGTMLLVGECLHNPLFSWAAIGAFLTCLADSAGSNRSRLASMGGFAL 62 ASLSEGLRAA A+ ML +G LH P F+WAAIGAF TCLAD+AGSNR+R ASM GFA+ Sbjct: 42 EASLSEGLRAACASTAMLALGNVLHEPTFAWAAIGAFWTCLADAAGSNRARFASMMGFAV 101 Query: 63 ASTMGGMFAATLSGMGMPAGLLAIMVCAGIAGFSRIYGAATGLVLMLAAGVSAILADFPV 122 ST+ G A S G LA++V + F RI+GAAT V +L A ++ D P+ Sbjct: 102 LSTLCGGLTAFASAAGTVFAALALLVFTSLGAFGRIWGAATAQVTILVATACVVMVDRPM 161 Query: 123 TLLPLQHSHVAIYFSGCAWATLLGLSVWRIHPFAPARQAVARV---------NAMALLLR 173 + + + +Y GC +A L L+VWRIHPF+ +R + V ++ LL R Sbjct: 162 HDVRQGMAFLGVYLIGCLFAVALSLTVWRIHPFSTSRSTLRAVYLRLADIALDSARLLER 221 Query: 174 TIQSGVAATPGKRNLVHSDTEDARAML-RLRQLVGRAPSQ 212 G AT + DARA L R R+++ R P+ Sbjct: 222 RAARGEWATHAAKF-----RADARAALERSRKVLARVPAS 256