BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0261.p (212 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3PCE8.1 B3PCE8_CELJU Sensory box/GGDEF family protein 234 7e-60 C1DCZ4.1 C1DCZ4_LARHH Predicted signal transduction protein cont... 233 2e-59 B9Z8G8.1 B9Z8G8_9NEIS Diguanylate cyclase/phosphodiesterase with... 231 4e-59 A6T1A8.1 A6T1A8_JANMA Sensory box/GGDEF family protein 231 4e-59 C4L9X9.1 C4L9X9_TOLAT Diguanylate cyclase/phosphodiesterase with... 230 8e-59 >B3PCE8.1 B3PCE8_CELJU Sensory box/GGDEF family protein Length = 772 Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 106/206 (51%), Positives = 150/206 (72%) Query: 1 VAPGMFITLAEQTGLIVPLGAWVLREACRQGKAWLDRGYQFGRIAVNLSPRQFSSDDLLA 60 V+P FI LAE+TGLIVP+G WVLREAC+Q K WLD G G++AVNLSPRQF + Sbjct: 548 VSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPG 607 Query: 61 TIDNALDQSGLPSAMLELEITEGAIMQNPQEAVVLLKRMRELGVTISVDDFGTGYSSLAS 120 ++ L ++GL + LELEITE M++ E + L ++ ++G +++DDFGTGYSSLA Sbjct: 608 KVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAY 667 Query: 121 LKQYPLDTLKIDRSFVKGIPADADDVAITEAIIAIAHKLHLKVVAEGVESQEQHDFLRAA 180 L+++P+ LKIDRSF+ I DA+D AI + II +AH + L+VVAEGVE++ Q ++LRA Sbjct: 668 LQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAK 727 Query: 181 GCDMVQGYLHAQPLTAGEIEQRWYLG 206 GCD VQG+L+A+P+TA ++E ++ G Sbjct: 728 GCDQVQGFLYAKPMTAKQLESHFHNG 753 >C1DCZ4.1 C1DCZ4_LARHH Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Length = 759 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 112/196 (57%), Positives = 142/196 (72%) Query: 1 VAPGMFITLAEQTGLIVPLGAWVLREACRQGKAWLDRGYQFGRIAVNLSPRQFSSDDLLA 60 V+P FI LAE+TGLI+P+G WVL ACRQ AW G+ G +AVNLS QF+ L Sbjct: 544 VSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTH 603 Query: 61 TIDNALDQSGLPSAMLELEITEGAIMQNPQEAVVLLKRMRELGVTISVDDFGTGYSSLAS 120 + L SGL + LELE+TE ++ NP A+ L+ ++ELGV +S+DDFGTGYSSLA Sbjct: 604 HLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQ 663 Query: 121 LKQYPLDTLKIDRSFVKGIPADADDVAITEAIIAIAHKLHLKVVAEGVESQEQHDFLRAA 180 LK++PLDTLKIDR+FV GIPADA D+AITEAIIA+A KL L VVAEGVE+ +Q DFL Sbjct: 664 LKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARC 723 Query: 181 GCDMVQGYLHAQPLTA 196 G +++QGY ++ PL A Sbjct: 724 GSELIQGYFYSPPLAA 739 >B9Z8G8.1 B9Z8G8_9NEIS Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 887 Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 119/207 (57%), Positives = 146/207 (70%), Gaps = 2/207 (0%) Query: 1 VAPGMFITLAEQTGLIVPLGAWVLREACRQGKAWLDRGYQFGRIAVNLSPRQFSSDDLLA 60 V P FI LAE+TGLIVPLG WVL EACRQGKAWLD G +AVNLSPRQF DL+ Sbjct: 675 VPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPL-LLAVNLSPRQFLRHDLVG 733 Query: 61 TIDNALDQSGLPSAMLELEITEGAIMQNPQEAVVLLKRMRELGVTISVDDFGTGYSSLAS 120 + AL SGLP A LELE+TEGA+M+ ++AV L ++ LGV++++DDFGTGYSSLA Sbjct: 734 QVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAY 793 Query: 121 LKQYPLDTLKIDRSFVKGIPADADDVAITEAIIAIAHKLHLKVVAEGVESQEQHDFLRAA 180 LK++PLD LKIDRSFV+ +P D+ D I IIA+ L L+ +AEGVE+ +Q FLR Sbjct: 794 LKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQL 853 Query: 181 GCDMVQGYLHAQPLTAGEIEQRWYLGG 207 GCD QGYL + PL A E +RW G Sbjct: 854 GCDSGQGYLFSPPLPA-EAFERWLRDG 879 >A6T1A8.1 A6T1A8_JANMA Sensory box/GGDEF family protein Length = 910 Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 108/200 (54%), Positives = 149/200 (74%) Query: 1 VAPGMFITLAEQTGLIVPLGAWVLREACRQGKAWLDRGYQFGRIAVNLSPRQFSSDDLLA 60 V PG FI+LAE+TGLI+P+GAWVL+ ACRQ KAW D G+ RIAVNLS RQF+ LL Sbjct: 698 VQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLE 757 Query: 61 TIDNALDQSGLPSAMLELEITEGAIMQNPQEAVVLLKRMRELGVTISVDDFGTGYSSLAS 120 +I + L ++GL + LE+E+TE ++M + + ++ L+ ++ LGV +SVDDFGTG+SSLA Sbjct: 758 SIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAY 817 Query: 121 LKQYPLDTLKIDRSFVKGIPADADDVAITEAIIAIAHKLHLKVVAEGVESQEQHDFLRAA 180 LK++P+DTLKIDRSFV+ I + DD +I +II++AH L L V+AEGVE+ Q D LRA Sbjct: 818 LKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQ 877 Query: 181 GCDMVQGYLHAQPLTAGEIE 200 GC+ +QGY +PL + +IE Sbjct: 878 GCNEIQGYYFCKPLPSDQIE 897 >C4L9X9.1 C4L9X9_TOLAT Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 1101 Score = 230 bits (587), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 152/211 (72%), Gaps = 3/211 (1%) Query: 1 VAPGMFITLAEQTGLIVPLGAWVLREACRQGKAWLDRGYQFGRIAVNLSPRQFSSDDLLA 60 ++P FI +AE+TGLI LG WVL EACRQGK W +G +AVN+SP QF + ++L Sbjct: 890 ISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNSNILE 949 Query: 61 TIDNALDQSGLPSAMLELEITEGAIMQNPQEAVVLLKRMRELGVTISVDDFGTGYSSLAS 120 ++ NAL Q+G P+++LELE+TE A+M + EAV +L +R+ G+ +++DDFGTGYSSLA Sbjct: 950 SVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSLAY 1009 Query: 121 LKQYPLDTLKIDRSFVKGIPADADDVAITEAIIAIAHKLHLKVVAEGVESQEQHDFLRAA 180 LK++PLD LKID+SFV IP DD+ I AI+A+AH L LKV+AEGVE++EQ FL+ Sbjct: 1010 LKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQ 1069 Query: 181 GCDMVQGYLHAQPLTAGEIEQRWYLGGAQAE 211 GCD QGYL + P+ A + EQ L AQAE Sbjct: 1070 GCDCYQGYLMSPPVPADQFEQ---LLRAQAE 1097