BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0188.p (377 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXC7.1 D8IXC7_HERSS Drug efflux lipoprotein 609 e-172 A4G8J8.1 A4G8J8_HERAR Outer membrane protein oprM 484 e-134 F1VXM4.1 F1VXM4_9BURK Outer membrane transport protein involved ... 474 e-131 A6T281.1 A6T281_JANMA Drug efflux lipoprotein 465 e-129 Q46VN4.1 Q46VN4_CUPPJ RND efflux system, outer membrane lipoprot... 459 e-127 >D8IXC7.1 D8IXC7_HERSS Drug efflux lipoprotein Length = 483 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 305/377 (80%), Positives = 341/377 (90%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLP LN +G+ +RTR +ASQS TG P I+ SYQVGLA+PAYELDFFGRVR+LKDAAL++Y Sbjct: 106 LLPNLNLSGNAARTRTAASQSLTGQPTISNSYQVGLAVPAYELDFFGRVRNLKDAALASY 165 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 LSTEEA++S QISLV+QVAQAYL ERSYAEQLKLA +TL+SRQSNL LAQKR DVGAS+A Sbjct: 166 LSTEEAQKSAQISLVAQVAQAYLAERSYAEQLKLADETLKSRQSNLDLAQKRLDVGASTA 225 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LD RL+ TLV+SAR + L RQRAQAENALTLLVG + +LP Q LS + IVTDIPAG Sbjct: 226 LDFRLTQTLVESARVAKTQLERQRAQAENALTLLVGKKIGELPPAQLLSDEKIVTDIPAG 285 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLLT RPDIRSAEQ LLAANANIGAARAAFFPRISLTG+FGSAS++LGGLF+SGSGA Sbjct: 286 LPSDLLTNRPDIRSAEQSLLAANANIGAARAAFFPRISLTGNFGSASSTLGGLFESGSGA 345 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 WS+GP LSLPIFDFGRNSANLD+AEVRKN+A+VTYEK IQTAFREVADALVARG+LDEQ+ Sbjct: 346 WSFGPSLSLPIFDFGRNSANLDLAEVRKNKAVVTYEKAIQTAFREVADALVARGSLDEQV 405 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 +AQEAFL AQQERL LTDLR+KNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY Sbjct: 406 KAQEAFLAAQQERLKLTDLRFKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 465 Query: 361 RALGGGLNETTVAAAAK 377 +ALGGGLNE TV+ AAK Sbjct: 466 KALGGGLNENTVSVAAK 482 >A4G8J8.1 A4G8J8_HERAR Outer membrane protein oprM Length = 474 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 252/378 (66%), Positives = 305/378 (80%), Gaps = 1/378 (0%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLP LN T + SR R AS S TG ++ +YQVGL++ ++ELDFFGRV SL DAAL++Y Sbjct: 97 LLPNLNGTFTGSRARTPASISPTGIDSVSSAYQVGLSLASFELDFFGRVHSLNDAALASY 156 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 L+TEEA+++ ISLV++VA+AYL ER++AEQL LAQ TL+SR + LA++RF+VGASSA Sbjct: 157 LATEEAQRAAHISLVAEVAKAYLAERAFAEQLALAQSTLKSRGTAYDLAKQRFEVGASSA 216 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LDLR ++ L+QSAR + TL RQRAQA NALTLLVG + P Q LS QNIVTDIPAG Sbjct: 217 LDLRQNEALLQSARVAQVTLARQRAQALNALTLLVGQPLTGFPEAQPLSAQNIVTDIPAG 276 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLLT+RPDIRSAEQ LLAANANIGAARAAFFPRISLT G+AS++L LFDSG+ A Sbjct: 277 LPSDLLTQRPDIRSAEQSLLAANANIGAARAAFFPRISLTAGIGTASSTLSNLFDSGTRA 336 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 W++ PQL LPIFD GRNSANL ++EVRKN AI YEK+IQ+AFREV+DALVAR L+EQI Sbjct: 337 WTFAPQLVLPIFDAGRNSANLTLSEVRKNIAIANYEKSIQSAFREVSDALVARDLLEEQI 396 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 +AQ +AQ ERL L D R++NGIASSLD LDAQR+LFSA+Q L+QAR LRL NAIDLY Sbjct: 397 DAQRRVQEAQAERLKLADQRFQNGIASSLDVLDAQRELFSAEQDLVQARLLRLTNAIDLY 456 Query: 361 RALGGGLNET-TVAAAAK 377 R+LGGGL E+ +VAA K Sbjct: 457 RSLGGGLTESNSVAATTK 474 >F1VXM4.1 F1VXM4_9BURK Outer membrane transport protein involved in copper (Silver) tolerance Length = 448 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 245/370 (66%), Positives = 292/370 (78%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLP +N T S +R R+ S S TG P SYQ+GL + ++ELDFFGRVRSL DAAL+ Y Sbjct: 75 LLPNINGTASGARARVPGSLSMTGRPTTGGSYQIGLGLASFELDFFGRVRSLNDAALAQY 134 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 L+T EAR SVQISLVS+VA+AYL ER + EQL LA+QTLE R LAQ+R+DVGASS Sbjct: 135 LATSEARLSVQISLVSEVAKAYLAERGFDEQLMLARQTLEGRLQAYQLAQQRYDVGASSE 194 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LDLRLS+TLVQ+AR S TL RQRAQA NALTLLVG DLPA LS +NI+T I AG Sbjct: 195 LDLRLSETLVQTARVSQLTLQRQRAQASNALTLLVGRATTDLPAAPLLSDENIITTIAAG 254 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLL RRPDIR+AEQ+L +ANANIGAARAAFFPRISLT + GS+SN+L GLFD+GSG+ Sbjct: 255 LPSDLLMRRPDIRAAEQRLKSANANIGAARAAFFPRISLTAAAGSSSNALSGLFDAGSGS 314 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 WS+ PQL LPIFD GRN +NL +A+VR + A+V YEK IQ AFREV+DALVARG L+EQ+ Sbjct: 315 WSFAPQLVLPIFDAGRNRSNLTLAQVRTDLAVVDYEKVIQIAFREVSDALVARGLLEEQV 374 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 AQ+A + AQ R L R+ NGI+S+LD +DAQR+LF AQQAL+Q RQLRL NA+DLY Sbjct: 375 LAQQAVVNAQTVRQTLAQQRFDNGISSALDVVDAQRELFIAQQALVQIRQLRLTNAVDLY 434 Query: 361 RALGGGLNET 370 R+LGGGL ET Sbjct: 435 RSLGGGLTET 444 >A6T281.1 A6T281_JANMA Drug efflux lipoprotein Length = 481 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 238/369 (64%), Positives = 291/369 (78%) Query: 1 LLPTLNATGSESRTRLSASQSTTGAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALSTY 60 LLPTLN + SR R+ AS S TG+ +++ +YQVGL + A+ELDFFGRVRSL DAAL+ Y Sbjct: 96 LLPTLNVNATGSRARVPASISNTGSSVVSSNYQVGLGLAAFELDFFGRVRSLSDAALAAY 155 Query: 61 LSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGASSA 120 LSTEEA+++ QISLVS+VA+AYL+ERS+AEQ LA+QT ESR L+++RF+VGASSA Sbjct: 156 LSTEEAQRAAQISLVSEVAKAYLSERSFAEQQDLARQTYESRVEAYKLSKQRFEVGASSA 215 Query: 121 LDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGTNVKDLPAGQDLSLQNIVTDIPAG 180 LDLR + L+Q+AR + RQRAQA NALTLLVG + DLP Q LS Q I+TDIPAG Sbjct: 216 LDLRNDEALLQTARAAELLAQRQRAQAMNALTLLVGQPLTDLPPAQALSSQTILTDIPAG 275 Query: 181 VPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFDSGSGA 240 +PSDLLT+RPDIRSAEQ LL+ANANIGAARAAFFPRISLT G++SN L GLF+ GS + Sbjct: 276 LPSDLLTQRPDIRSAEQTLLSANANIGAARAAFFPRISLTAGLGTSSNELAGLFEGGSRS 335 Query: 241 WSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGTLDEQI 300 WS+ PQL LPIFD GRN NL++AEVRK+ A+ YEK+IQ AFREV+DALVAR LD+Q+ Sbjct: 336 WSFAPQLVLPIFDAGRNRGNLNLAEVRKDIAVANYEKSIQVAFREVSDALVARDLLDQQV 395 Query: 301 EAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNNAIDLY 360 EAQ +AQ ER R++NGIASSLD LDAQR+LF+AQ +L+Q R RL NA+DLY Sbjct: 396 EAQRLVQEAQAERFKFATQRFQNGIASSLDVLDAQRELFTAQLSLVQVRLTRLTNAVDLY 455 Query: 361 RALGGGLNE 369 R+LGGGL E Sbjct: 456 RSLGGGLVE 464 >Q46VN4.1 Q46VN4_CUPPJ RND efflux system, outer membrane lipoprotein, NodT Length = 496 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 232/375 (61%), Positives = 296/375 (78%), Gaps = 5/375 (1%) Query: 1 LLPTLNATGSESRTRLSASQSTT--GAPLITKSYQVGLAIPAYELDFFGRVRSLKDAALS 58 LLPT+NA +R R SA+Q+ T G P ++ Y VGL I +YELDFFGRVRSL +AAL+ Sbjct: 104 LLPTVNANAGYTRARTSAAQTATVLGQPSVSDLYSVGLGISSYELDFFGRVRSLSNAALA 163 Query: 59 TYLSTEEARQSVQISLVSQVAQAYLTERSYAEQLKLAQQTLESRQSNLGLAQKRFDVGAS 118 Y +TEEA +S ISLVS+VA+AYL+ERS+AEQ ++A+ TL++R+S LA++RFDVGA+ Sbjct: 164 QYFATEEAHRSAYISLVSEVAKAYLSERSFAEQYEIARDTLKARESTYALAKQRFDVGAT 223 Query: 119 SALDLRLSDTLVQSARTSVATLLRQRAQAENALTLLVGT---NVKDLPAGQDLSLQNIVT 175 SALDLR +++LV AR S A L RQRAQA+NAL +LVG ++++LP LS + I++ Sbjct: 224 SALDLRDNESLVAQARVSAAQLARQRAQAQNALEVLVGKPIGSIENLPEPMRLSDERIIS 283 Query: 176 DIPAGVPSDLLTRRPDIRSAEQKLLAANANIGAARAAFFPRISLTGSFGSASNSLGGLFD 235 DIP G+PSDLL +RPDIR AEQ LL+ANANIGAARAAFFPRI+LT + G+ S + GLFD Sbjct: 284 DIPEGLPSDLLEQRPDIRQAEQLLLSANANIGAARAAFFPRITLTTNIGTISPTFSGLFD 343 Query: 236 SGSGAWSYGPQLSLPIFDFGRNSANLDVAEVRKNQAIVTYEKTIQTAFREVADALVARGT 295 +G+ AWS+ PQL+LPIFD+GRN +NLD+A VRKN + YEKTIQTAF EVADALVARGT Sbjct: 344 AGTKAWSFAPQLTLPIFDYGRNKSNLDLANVRKNIEVANYEKTIQTAFAEVADALVARGT 403 Query: 296 LDEQIEAQEAFLKAQQERLNLTDLRYKNGIASSLDQLDAQRDLFSAQQALIQARQLRLNN 355 L++Q+ QE A+ R L LR+++G+AS LD+LDAQR LF+A+QALIQARQLRLNN Sbjct: 404 LEDQVAGQEQVRNAEAARYELARLRFRSGVASYLDELDAQRQLFTAEQALIQARQLRLNN 463 Query: 356 AIDLYRALGGGLNET 370 +IDLYR+LGGGL ET Sbjct: 464 SIDLYRSLGGGLKET 478