BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0176.p (336 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6T0A1.1 A6T0A1_JANMA Capsular polysaccharide synthesis enzyme 629 e-178 A4XTG9.1 A4XTG9_PSEMY Polysaccharide biosynthesis protein CapD 595 e-168 Q4K6E8.1 Q4K6E8_PSEF5 Polysaccharide biosynthesis protein 592 e-167 A4G489.1 A4G489_HERAR Putative polysaccharide biosynthesis prote... 574 e-162 E4RDS2.1 E4RDS2_PSEPB Polysaccharide biosynthesis protein EC=5.1... 573 e-161 >A6T0A1.1 A6T0A1_JANMA Capsular polysaccharide synthesis enzyme Length = 336 Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust. Identities = 299/336 (88%), Positives = 322/336 (95%) Query: 1 MFDNKVLMITGGTGSFGNTVLKRFLDTAVREIRIFSRDEKKQEDMRIALKNDKVKFYIGD 60 MFD+KVLMITGGTGSFGNTVLKRFLDT VREIRIFSRDEKKQEDMRIAL N+KVKFYIGD Sbjct: 1 MFDDKVLMITGGTGSFGNTVLKRFLDTDVREIRIFSRDEKKQEDMRIALGNNKVKFYIGD 60 Query: 61 VRNYDSIAQAMVGVDFVFHAAALKQVPSCEFYPMEAIRTNILGTENVLNAAIASKVKRVV 120 VR+YDS+ QAM GVDFVFHAAALKQVPSCEFYPMEA+RTN+LGTENVLNAAI+SKVKRVV Sbjct: 61 VRDYDSLTQAMTGVDFVFHAAALKQVPSCEFYPMEAVRTNVLGTENVLNAAISSKVKRVV 120 Query: 121 VLSTDKAVYPINAMGISKAMAEKLVTAKSRGIPADGPRICATRYGNVMASRGSVIPLFVS 180 VLSTDKAVYPINAMGISKAMAEKLV AKSR I GP +C+TRYGNVMASRGSVIPLF++ Sbjct: 121 VLSTDKAVYPINAMGISKAMAEKLVIAKSRTIAEGGPVVCSTRYGNVMASRGSVIPLFIN 180 Query: 181 QLKAGQPLTVTDPNMTRFLMSLEDSVDLVLHAFEHAQQGDLFVQKAPASTVADLAQALRE 240 QLK+GQP+TVTDPNMTRFLMSLEDSVDLVLHAFEHA+QGDLFVQKAPASTVADLAQALRE Sbjct: 181 QLKSGQPITVTDPNMTRFLMSLEDSVDLVLHAFEHAEQGDLFVQKAPASTVADLAQALRE 240 Query: 241 LFKLDNPVKVIGTRHGEKLYESLISREEMAKAEDMGRYYRVPADNRDLNYNKYFVEGESH 300 LF+L+N VKVIGTRHGEKLYESLISREEMAKA+DMGRYYR+PADNRDLNY+KYFVEGESH Sbjct: 241 LFQLNNEVKVIGTRHGEKLYESLISREEMAKADDMGRYYRIPADNRDLNYSKYFVEGESH 300 Query: 301 ISELDDYTSHNTQRLNVEEIKTLLLKLPEIREALDA 336 ISELDDYTSHNT+RLNVE+IK LLL L E+REAL+A Sbjct: 301 ISELDDYTSHNTERLNVEQIKQLLLNLMEVREALNA 336 >A4XTG9.1 A4XTG9_PSEMY Polysaccharide biosynthesis protein CapD Length = 336 Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust. Identities = 286/336 (85%), Positives = 308/336 (91%) Query: 1 MFDNKVLMITGGTGSFGNTVLKRFLDTAVREIRIFSRDEKKQEDMRIALKNDKVKFYIGD 60 MFD+KVLMITGGTGSFG+TVL+RFLDT VREIRIFSRDEKKQEDMRIAL NDKVKFYIGD Sbjct: 1 MFDDKVLMITGGTGSFGHTVLRRFLDTNVREIRIFSRDEKKQEDMRIALANDKVKFYIGD 60 Query: 61 VRNYDSIAQAMVGVDFVFHAAALKQVPSCEFYPMEAIRTNILGTENVLNAAIASKVKRVV 120 VR+ DS+ QAMVGVD++FHAAALKQVPSCEFYPMEA+RTN+ GTENVLNAAIAS VKRVV Sbjct: 61 VRDCDSLKQAMVGVDYIFHAAALKQVPSCEFYPMEAVRTNVNGTENVLNAAIASGVKRVV 120 Query: 121 VLSTDKAVYPINAMGISKAMAEKLVTAKSRGIPADGPRICATRYGNVMASRGSVIPLFVS 180 VLSTDKAVYPINAMGISKAMAEKL+ AKSR IP G +CATRYGNVMASRGSVIPLF+ Sbjct: 121 VLSTDKAVYPINAMGISKAMAEKLMVAKSRMIPEGGTVVCATRYGNVMASRGSVIPLFID 180 Query: 181 QLKAGQPLTVTDPNMTRFLMSLEDSVDLVLHAFEHAQQGDLFVQKAPASTVADLAQALRE 240 QL++G+PLTVTDP MTRFLMSLEDSVDLVLHAFEH +QGDLFVQKAPASTV DLAQAL+E Sbjct: 181 QLRSGEPLTVTDPQMTRFLMSLEDSVDLVLHAFEHGEQGDLFVQKAPASTVGDLAQALKE 240 Query: 241 LFKLDNPVKVIGTRHGEKLYESLISREEMAKAEDMGRYYRVPADNRDLNYNKYFVEGESH 300 LF DNPV+VIGTRHGEKLYESL+SREEMAKAEDMGRYYR+PADNRDLNY KYFVEGE Sbjct: 241 LFGHDNPVRVIGTRHGEKLYESLVSREEMAKAEDMGRYYRIPADNRDLNYKKYFVEGEEK 300 Query: 301 ISELDDYTSHNTQRLNVEEIKTLLLKLPEIREALDA 336 ISELDDYTSHNT RL+V IK LLLKL I+E LDA Sbjct: 301 ISELDDYTSHNTHRLDVPGIKELLLKLDYIKEQLDA 336 >Q4K6E8.1 Q4K6E8_PSEF5 Polysaccharide biosynthesis protein Length = 336 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 286/336 (85%), Positives = 308/336 (91%) Query: 1 MFDNKVLMITGGTGSFGNTVLKRFLDTAVREIRIFSRDEKKQEDMRIALKNDKVKFYIGD 60 MF++KVLMITGGTGSFG+TVL+RFL+T VREIRIFSRDEKKQEDMRIAL NDKVKFYIGD Sbjct: 1 MFNDKVLMITGGTGSFGHTVLRRFLNTDVREIRIFSRDEKKQEDMRIALANDKVKFYIGD 60 Query: 61 VRNYDSIAQAMVGVDFVFHAAALKQVPSCEFYPMEAIRTNILGTENVLNAAIASKVKRVV 120 VR+ DS+ QAMVGVD+VFHAAALKQVPSCEFYPMEA+RTN+ GTENVLNAAIA VKRVV Sbjct: 61 VRDPDSLRQAMVGVDYVFHAAALKQVPSCEFYPMEAVRTNVQGTENVLNAAIACGVKRVV 120 Query: 121 VLSTDKAVYPINAMGISKAMAEKLVTAKSRGIPADGPRICATRYGNVMASRGSVIPLFVS 180 VLSTDKAVYPINAMGISKAMAEKL+ AKSR IP G ICATRYGNVMASRGSVIPLFV Sbjct: 121 VLSTDKAVYPINAMGISKAMAEKLMVAKSRMIPEGGTVICATRYGNVMASRGSVIPLFVE 180 Query: 181 QLKAGQPLTVTDPNMTRFLMSLEDSVDLVLHAFEHAQQGDLFVQKAPASTVADLAQALRE 240 QL+ G+PLTVTDP MTRFLMSLEDSVDLVLHAFEH QQGDLFVQKAPASTV DLAQAL+E Sbjct: 181 QLRKGEPLTVTDPQMTRFLMSLEDSVDLVLHAFEHGQQGDLFVQKAPASTVGDLAQALKE 240 Query: 241 LFKLDNPVKVIGTRHGEKLYESLISREEMAKAEDMGRYYRVPADNRDLNYNKYFVEGESH 300 LF LD+PV+VIGTRHGEKLYESL+SREEMAKAEDMGRYYRVPADNRDLNY KYFVEGE Sbjct: 241 LFSLDSPVRVIGTRHGEKLYESLVSREEMAKAEDMGRYYRVPADNRDLNYKKYFVEGEEK 300 Query: 301 ISELDDYTSHNTQRLNVEEIKTLLLKLPEIREALDA 336 ISELDDYTSHNT+RL++ IK LLLKL I+E L+A Sbjct: 301 ISELDDYTSHNTERLDISGIKHLLLKLDYIQEQLNA 336 >A4G489.1 A4G489_HERAR Putative polysaccharide biosynthesis protein CapE-like Length = 336 Score = 574 bits (1480), Expect = e-162, Method: Compositional matrix adjust. Identities = 272/336 (80%), Positives = 304/336 (90%) Query: 1 MFDNKVLMITGGTGSFGNTVLKRFLDTAVREIRIFSRDEKKQEDMRIALKNDKVKFYIGD 60 MFD+KVLMITGGTGSFGN VL RFL TAVREIRIFSRDEKKQEDMRIAL N K+KFYIGD Sbjct: 1 MFDDKVLMITGGTGSFGNAVLTRFLSTAVREIRIFSRDEKKQEDMRIALNNPKLKFYIGD 60 Query: 61 VRNYDSIAQAMVGVDFVFHAAALKQVPSCEFYPMEAIRTNILGTENVLNAAIASKVKRVV 120 +RNYDSI +AM GVD++FHAAALKQVPSCEFYPMEA+RTN+LGTENVLNAA+A++VKRVV Sbjct: 61 IRNYDSIHEAMHGVDYIFHAAALKQVPSCEFYPMEAVRTNVLGTENVLNAAVANRVKRVV 120 Query: 121 VLSTDKAVYPINAMGISKAMAEKLVTAKSRGIPADGPRICATRYGNVMASRGSVIPLFVS 180 VLSTDKAVYPINAMGISKAM EKL+ AK+R A ICATRYGNVMASRGSVIPLFV Sbjct: 121 VLSTDKAVYPINAMGISKAMMEKLMVAKARMRSAGETVICATRYGNVMASRGSVIPLFVG 180 Query: 181 QLKAGQPLTVTDPNMTRFLMSLEDSVDLVLHAFEHAQQGDLFVQKAPASTVADLAQALRE 240 QL G+PLTVTDPNMTRFLMSLEDSVDLVLHAFEH +QGD+F+QKAPASTV DLA AL+E Sbjct: 181 QLNEGKPLTVTDPNMTRFLMSLEDSVDLVLHAFEHGEQGDIFIQKAPASTVGDLAIALKE 240 Query: 241 LFKLDNPVKVIGTRHGEKLYESLISREEMAKAEDMGRYYRVPADNRDLNYNKYFVEGESH 300 +F DNPV+VIGTRHGEKLYESL+SREEMAKA+DMGRY+R+PADNRDLNY KYFVEGE+ Sbjct: 241 VFSKDNPVRVIGTRHGEKLYESLVSREEMAKADDMGRYFRIPADNRDLNYAKYFVEGETR 300 Query: 301 ISELDDYTSHNTQRLNVEEIKTLLLKLPEIREALDA 336 ISE+DDYTSHNT+RL +E++K +LLKL I+E L A Sbjct: 301 ISEIDDYTSHNTERLTIEQVKEILLKLDFIQEQLHA 336 >E4RDS2.1 E4RDS2_PSEPB Polysaccharide biosynthesis protein EC=5.1.3.2 Length = 337 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 274/335 (81%), Positives = 302/335 (90%), Gaps = 1/335 (0%) Query: 1 MFDNKVLMITGGTGSFGNTVLKRFLDTAVREIRIFSRDEKKQEDMRIALKNDKVKFYIGD 60 MF NKVLMITGGTGSFGNTVLKRFLDT V+EIRIFSRDEKKQEDMRIAL NDKVKFYIGD Sbjct: 1 MFKNKVLMITGGTGSFGNTVLKRFLDTDVKEIRIFSRDEKKQEDMRIALGNDKVKFYIGD 60 Query: 61 VRNYDSIAQAMVGVDFVFHAAALKQVPSCEFYPMEAIRTNILGTENVLNAAIASKVKRVV 120 VR+Y S+ QAMVGVD++FHAAALKQVPSCEF+PMEA++TN++GTENVLNAA+ KVKRVV Sbjct: 61 VRDYSSLIQAMVGVDYIFHAAALKQVPSCEFFPMEAVKTNVMGTENVLNAAVECKVKRVV 120 Query: 121 VLSTDKAVYPINAMGISKAMAEKLVTAKSRGIPADGPR-ICATRYGNVMASRGSVIPLFV 179 VLSTDKAVYPINAMGISKA+AEKLV AKSR IP P ICATRYGNVMASRGSVIPLFV Sbjct: 121 VLSTDKAVYPINAMGISKALAEKLVIAKSRMIPDTSPTVICATRYGNVMASRGSVIPLFV 180 Query: 180 SQLKAGQPLTVTDPNMTRFLMSLEDSVDLVLHAFEHAQQGDLFVQKAPASTVADLAQALR 239 +QLK GQ LTVTDPNMTRFLMSLEDSVDLVLHAFEH+QQGD+FVQKAPASTV DLA+AL+ Sbjct: 181 NQLKCGQALTVTDPNMTRFLMSLEDSVDLVLHAFEHSQQGDIFVQKAPASTVGDLAEALK 240 Query: 240 ELFKLDNPVKVIGTRHGEKLYESLISREEMAKAEDMGRYYRVPADNRDLNYNKYFVEGES 299 +LF + VKVIGTRHGEKLYESLISREEMAKAEDMGRYYR+PADNRDLNY KY +GE Sbjct: 241 QLFVSSSEVKVIGTRHGEKLYESLISREEMAKAEDMGRYYRIPADNRDLNYEKYASDGEQ 300 Query: 300 HISELDDYTSHNTQRLNVEEIKTLLLKLPEIREAL 334 +S+LDDYTSHNT L++EEIK LL+L I++ L Sbjct: 301 EVSQLDDYTSHNTTLLSIEEIKETLLRLEYIQQEL 335