BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0148.p         (113 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C6WVI3.1 C6WVI3_METML Putative transcriptional regulator              139   2e-31
A6VTF3.1 A6VTF3_MARMS Putative transcriptional regulator, AsnC f...   135   2e-30
C0N9Y0.1 C0N9Y0_9GAMM Putative uncharacterized protein                134   5e-30
B5EJN3.1 B5EJN3_ACIF5 Transcriptional regulator, MarR family          126   1e-27
B7J3H6.1 B7J3H6_ACIF2 Putative uncharacterized protein                126   1e-27

>C6WVI3.1 C6WVI3_METML Putative transcriptional regulator
          Length = 130

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 85/104 (81%)

Query: 1   MLSEEYRYKILKRLGSQPETSQRELARDLGISLGKVNFCLNALIEKGLIKVNNFQANPNK 60
           ML++EY+YKILK + +  ETSQREL++ LGISLGK N+CL ALIEKG++KV+NF+ + NK
Sbjct: 9   MLTDEYKYKILKLVAANSETSQRELSKALGISLGKTNYCLQALIEKGMLKVSNFKNSKNK 68

Query: 61  RGYIYLLTPKGIEEKTLITMLFLKSKVREYESLSHEIEDLRSEV 104
             Y+YLLTPKGIEEK+ IT+ FLK+K++EYE L  EI+ L  EV
Sbjct: 69  LAYMYLLTPKGIEEKSAITLAFLKAKIKEYEMLDAEIKSLSQEV 112


>A6VTF3.1 A6VTF3_MARMS Putative transcriptional regulator, AsnC family
          Length = 106

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/104 (65%), Positives = 80/104 (76%)

Query: 1   MLSEEYRYKILKRLGSQPETSQRELARDLGISLGKVNFCLNALIEKGLIKVNNFQANPNK 60
           ML++EYRYKILK L   P+ SQRELA+ L ISLGK NFCL ALIEKGLIK  NF+ + NK
Sbjct: 1   MLTDEYRYKILKELQQDPDISQRELAKRLDISLGKANFCLKALIEKGLIKAENFKNSTNK 60

Query: 61  RGYIYLLTPKGIEEKTLITMLFLKSKVREYESLSHEIEDLRSEV 104
            GY+YLLTPKGIEEK  +T  FL+ K++E+E L  EIE LR EV
Sbjct: 61  IGYLYLLTPKGIEEKVSLTQRFLQRKLKEHEVLEKEIEQLRQEV 104


>C0N9Y0.1 C0N9Y0_9GAMM Putative uncharacterized protein
          Length = 109

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 80/104 (76%)

Query: 1   MLSEEYRYKILKRLGSQPETSQRELARDLGISLGKVNFCLNALIEKGLIKVNNFQANPNK 60
           ML++EYRYKI K + + PE SQRELAR LGISLGK NFCL ALI+KGLIKVNNF+ + NK
Sbjct: 1   MLTDEYRYKIFKLVEANPEVSQRELARKLGISLGKTNFCLKALIDKGLIKVNNFRNSNNK 60

Query: 61  RGYIYLLTPKGIEEKTLITMLFLKSKVREYESLSHEIEDLRSEV 104
             Y Y LTP GI+EK  +T+ FLK K++EYE L  EIE++  EV
Sbjct: 61  LAYAYKLTPSGIDEKANVTIRFLKKKMKEYELLKQEIENISQEV 104


>B5EJN3.1 B5EJN3_ACIF5 Transcriptional regulator, MarR family
          Length = 123

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 80/110 (72%)

Query: 1   MLSEEYRYKILKRLGSQPETSQRELARDLGISLGKVNFCLNALIEKGLIKVNNFQANPNK 60
           ML +  RY +LK L   PE++QRELA  +G+SLGK N+CL AL++KGL+K+ NF++NPNK
Sbjct: 5   MLDDATRYHLLKLLTEHPESTQRELAAAMGVSLGKTNYCLKALVDKGLVKMGNFRSNPNK 64

Query: 61  RGYIYLLTPKGIEEKTLITMLFLKSKVREYESLSHEIEDLRSEVERLRLS 110
             Y YLLTP+GI+EK  +T+ FL  K+ EY++L  EI  LR EV+ L  S
Sbjct: 65  DVYAYLLTPEGIQEKARVTVRFLHRKMAEYDTLQAEIAALRREVDGLSAS 114


>B7J3H6.1 B7J3H6_ACIF2 Putative uncharacterized protein
          Length = 119

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 80/110 (72%)

Query: 1   MLSEEYRYKILKRLGSQPETSQRELARDLGISLGKVNFCLNALIEKGLIKVNNFQANPNK 60
           ML +  RY +LK L   PE++QRELA  +G+SLGK N+CL AL++KGL+K+ NF++NPNK
Sbjct: 1   MLDDATRYHLLKLLTEHPESTQRELAAAMGVSLGKTNYCLKALVDKGLVKMGNFRSNPNK 60

Query: 61  RGYIYLLTPKGIEEKTLITMLFLKSKVREYESLSHEIEDLRSEVERLRLS 110
             Y YLLTP+GI+EK  +T+ FL  K+ EY++L  EI  LR EV+ L  S
Sbjct: 61  DVYAYLLTPEGIQEKARVTVRFLHRKMAEYDTLQAEIAALRREVDGLSAS 110